RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 ZNF728P0DKX0 622 aa7.24□□□□□ -1.25
TPM3-213ENST00000368545 CD34P28906 385 aa7.24□□□□□ -1.25
TPM3-213ENST00000368545 OR3A1P47881 315 aa7.24□□□□□ -1.25
TPM3-213ENST00000368545 SNRPD2P62316 118 aaKnown RBP7.24□□□□□ -1.25
TPM3-213ENST00000368545 CCL8P80075 99 aa7.24□□□□□ -1.25
TPM3-213ENST00000368545 BAMBIQ13145 260 aa7.24□□□□□ -1.25
TPM3-213ENST00000368545 HMGN3Q15651 99 aa7.24□□□□□ -1.25
TPM3-213ENST00000368545 C6orf183Q5T699 404 aa7.24□□□□□ -1.25
TPM3-213ENST00000368545 TEX36Q5VZQ5 186 aa7.24□□□□□ -1.25
TPM3-213ENST00000368545 WDR73Q6P4I2 378 aa7.24□□□□□ -1.25
TPM3-213ENST00000368545 ZNF561Q8N587 486 aa7.24□□□□□ -1.25
TPM3-213ENST00000368545 ADAD2Q8NCV1 583 aaKnown RBP7.24□□□□□ -1.25
TPM3-213ENST00000368545 OR5T2Q8NGG2 359 aa7.24□□□□□ -1.25
TPM3-213ENST00000368545 OR10J5Q8NHC4 309 aa7.24□□□□□ -1.25
TPM3-213ENST00000368545 NEU4Q8WWR8 484 aaPredicted RBP7.24□□□□□ -1.25
TPM3-213ENST00000368545 PIK3IP1Q96FE7 263 aa7.24□□□□□ -1.25
TPM3-213ENST00000368545 RTBDNQ9BSG5 229 aaPredicted RBP7.24□□□□□ -1.25
TPM3-213ENST00000368545 RANBP3Q9H6Z4 567 aaPredicted RBP7.24□□□□□ -1.25
TPM3-213ENST00000368545 KCNIP1Q9NZI2 227 aa7.24□□□□□ -1.25
TPM3-213ENST00000368545 FN1P02751 2386 aaKnown RBP7.23□□□□□ -1.25
TPM3-213ENST00000368545 TRBV6-7A0A0A0MS04 114 aa7.23□□□□□ -1.25
TPM3-213ENST00000368545 A0A0B4J2A0 478 aa7.23□□□□□ -1.25
TPM3-213ENST00000368545 FAM172BPA6NC97 362 aa7.23□□□□□ -1.25
TPM3-213ENST00000368545 SLC22A5O76082 557 aa7.23□□□□□ -1.25
TPM3-213ENST00000368545 SFT2D2O95562 160 aa7.23□□□□□ -1.25
TPM3-213ENST00000368545 RCC1P18754 421 aaPredicted RBP7.23□□□□□ -1.25
TPM3-213ENST00000368545 AADACP22760 399 aa7.23□□□□□ -1.25
TPM3-213ENST00000368545 LOXP28300 417 aaPredicted RBP7.23□□□□□ -1.25
TPM3-213ENST00000368545 ERP29P30040 261 aaKnown RBP7.23□□□□□ -1.25
TPM3-213ENST00000368545 GABRA2P47869 451 aa7.23□□□□□ -1.25
TPM3-213ENST00000368545 HERPUD1Q15011 391 aa7.23□□□□□ -1.25
TPM3-213ENST00000368545 ABCA11PQ4W5N1 156 aa7.23□□□□□ -1.25
TPM3-213ENST00000368545 SPRNQ5BIV9 151 aa7.23□□□□□ -1.25
TPM3-213ENST00000368545 STUMQ69YW2 141 aa7.23□□□□□ -1.25
TPM3-213ENST00000368545 MUC15Q8N387 334 aa7.23□□□□□ -1.25
TPM3-213ENST00000368545 CD177Q8N6Q3 437 aa7.23□□□□□ -1.25
TPM3-213ENST00000368545 BOLLQ8N9W6 283 aaKnown RBP7.23□□□□□ -1.25
TPM3-213ENST00000368545 CCDC71LQ8N9Z2 235 aa7.23□□□□□ -1.25
TPM3-213ENST00000368545 COQ8AQ8NI60 647 aa7.23□□□□□ -1.25
TPM3-213ENST00000368545 ANGPTL6Q8NI99 470 aa7.23□□□□□ -1.25
TPM3-213ENST00000368545 TOMM40LQ969M1 308 aa7.23□□□□□ -1.25
TPM3-213ENST00000368545 TMEM230Q96A57 120 aa7.23□□□□□ -1.25
TPM3-213ENST00000368545 HYLS1Q96M11 299 aa7.23□□□□□ -1.25
TPM3-213ENST00000368545 GAR1Q9NY12 217 aaKnown RBP7.23□□□□□ -1.25
TPM3-213ENST00000368545 SHPKQ9UHJ6 478 aa7.23□□□□□ -1.25
TPM3-213ENST00000368545 RAI1Q7Z5J4 1906 aaPredicted RBP7.23□□□□□ -1.25
TPM3-213ENST00000368545 KRTAP23-1A1A580 65 aa7.22□□□□□ -1.25
TPM3-213ENST00000368545 CRYM-AS1A6NIL9 109 aa7.22□□□□□ -1.25
TPM3-213ENST00000368545 MGST3O14880 152 aa7.22□□□□□ -1.25
TPM3-213ENST00000368545 CD5LO43866 347 aa7.22□□□□□ -1.25
TPM3-213ENST00000368545 ZNF737O75373 536 aa7.22□□□□□ -1.25
TPM3-213ENST00000368545 OR2A4O95047 310 aa7.22□□□□□ -1.25
TPM3-213ENST00000368545 NFYAP23511 347 aaPredicted RBP7.22□□□□□ -1.25
TPM3-213ENST00000368545 PPOXP50336 477 aa7.22□□□□□ -1.25
TPM3-213ENST00000368545 FXYD4P59646 89 aa7.22□□□□□ -1.25
TPM3-213ENST00000368545 SGPP2Q8IWX5 399 aa7.22□□□□□ -1.25
TPM3-213ENST00000368545 UXS1Q8NBZ7 420 aa7.22□□□□□ -1.25
TPM3-213ENST00000368545 OR5D13Q8NGL4 314 aa7.22□□□□□ -1.25
TPM3-213ENST00000368545 NEUROG1Q92886 237 aa7.22□□□□□ -1.25
TPM3-213ENST00000368545 COQ2Q96H96 371 aa7.22□□□□□ -1.25
TPM3-213ENST00000368545 OR2A7Q96R45 310 aa7.22□□□□□ -1.25
TPM3-213ENST00000368545 C19orf24Q9BVV8 132 aa7.22□□□□□ -1.25
TPM3-213ENST00000368545 SHARPINQ9H0F6 387 aa7.22□□□□□ -1.25
TPM3-213ENST00000368545 FAM234AQ9H0X4 552 aa7.22□□□□□ -1.25
TPM3-213ENST00000368545 DNTTIP1Q9H147 329 aa7.22□□□□□ -1.25
TPM3-213ENST00000368545 LIME1Q9H400 295 aa7.22□□□□□ -1.25
TPM3-213ENST00000368545 NCOR1P1Q9H4R4 102 aa7.22□□□□□ -1.25
TPM3-213ENST00000368545 OPN4Q9UHM6 478 aa7.22□□□□□ -1.25
TPM3-213ENST00000368545 RELNP78509 3460 aa7.22□□□□□ -1.25
TPM3-213ENST00000368545 ARFGEF3Q5TH69 2177 aa7.22□□□□□ -1.25
TPM3-213ENST00000368545 DSCAMO60469 2012 aa7.22□□□□□ -1.25
TPM3-213ENST00000368545 TRAV38-1A0A0B4J264 116 aa7.22□□□□□ -1.25
TPM3-213ENST00000368545 IGKV1-6A0A0C4DH72 117 aa7.22□□□□□ -1.25
TPM3-213ENST00000368545 NKX6-3A6NJ46 265 aa7.22□□□□□ -1.25
TPM3-213ENST00000368545 FAM25EA8MYX2 175 aa7.22□□□□□ -1.25
TPM3-213ENST00000368545 K7N7A8 449 aa7.22□□□□□ -1.25
TPM3-213ENST00000368545 GOSR2O14653 212 aa7.22□□□□□ -1.25
TPM3-213ENST00000368545 RGS11O94810 467 aa7.22□□□□□ -1.25
TPM3-213ENST00000368545 CYB5R3P00387 301 aaPredicted RBP7.22□□□□□ -1.25
TPM3-213ENST00000368545 PLAUP00749 431 aa7.22□□□□□ -1.25
TPM3-213ENST00000368545 HLA-GP17693 338 aa7.22□□□□□ -1.25
TPM3-213ENST00000368545 CD80P33681 288 aa7.22□□□□□ -1.25
TPM3-213ENST00000368545 PIGPP57054 158 aa7.22□□□□□ -1.25
TPM3-213ENST00000368545 H1FOOQ8IZA3 346 aaPredicted RBP7.22□□□□□ -1.25
TPM3-213ENST00000368545 SYT8Q8NBV8 401 aa7.22□□□□□ -1.25
TPM3-213ENST00000368545 OR5M8Q8NGP6 311 aa7.22□□□□□ -1.25
TPM3-213ENST00000368545 CASTOR1Q8WTX7 329 aa7.22□□□□□ -1.25
TPM3-213ENST00000368545 GALMQ96C23 342 aa7.22□□□□□ -1.25
TPM3-213ENST00000368545 SDSLQ96GA7 329 aa7.22□□□□□ -1.25
TPM3-213ENST00000368545 Q96MF0 132 aa7.22□□□□□ -1.25
TPM3-213ENST00000368545 AIFM2Q9BRQ8 373 aa7.22□□□□□ -1.25
TPM3-213ENST00000368545 TAF9BQ9HBM6 251 aa7.22□□□□□ -1.25
TPM3-213ENST00000368545 RAB9BQ9NP90 201 aa7.22□□□□□ -1.25
TPM3-213ENST00000368545 SLC2A9Q9NRM0 540 aa7.22□□□□□ -1.25
TPM3-213ENST00000368545 KIF25Q9UIL4 384 aa7.22□□□□□ -1.25
TPM3-213ENST00000368545 IGHV3OR15-7A0A075B7D8 119 aa7.21□□□□□ -1.25
TPM3-213ENST00000368545 TEX13DA0A0J9YY54 714 aaPredicted RBP7.21□□□□□ -1.25
TPM3-213ENST00000368545 DBX1A6NMT0 343 aa7.21□□□□□ -1.25
TPM3-213ENST00000368545 S100GP29377 79 aa7.21□□□□□ -1.25
TPM3-213ENST00000368545 RND3P61587 244 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms