RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 RDH5Q92781 318 aa9.01□□□□□ -0.97
TPM3-212ENST00000368533 NSG2Q9Y328 171 aa9.01□□□□□ -0.97
TPM3-212ENST00000368533 FAM90A27PA6NNH2 459 aa9□□□□□ -0.97
TPM3-212ENST00000368533 PAX1P15863 534 aa9□□□□□ -0.97
TPM3-212ENST00000368533 TMEM187Q14656 261 aa9□□□□□ -0.97
TPM3-212ENST00000368533 WDR86Q86TI4 376 aa9□□□□□ -0.97
TPM3-212ENST00000368533 RAB24Q969Q5 203 aa9□□□□□ -0.97
TPM3-212ENST00000368533 MAGT1Q9H0U3 335 aa9□□□□□ -0.97
TPM3-212ENST00000368533 WFDC1Q9HC57 220 aa9□□□□□ -0.97
TPM3-212ENST00000368533 IGSF10Q6WRI0 2623 aa9□□□□□ -0.97
TPM3-212ENST00000368533 IGHV2OR16-5A0A0B4J2B6 119 aa9□□□□□ -0.97
TPM3-212ENST00000368533 ST8SIA3O43173 380 aa9□□□□□ -0.97
TPM3-212ENST00000368533 RBM11P57052 281 aaKnown RBP9□□□□□ -0.97
TPM3-212ENST00000368533 JOSD1Q15040 202 aaPredicted RBP9□□□□□ -0.97
TPM3-212ENST00000368533 TEX38Q6PEX7 206 aa9□□□□□ -0.97
TPM3-212ENST00000368533 LIAT1Q6ZQX7 453 aa9□□□□□ -0.97
TPM3-212ENST00000368533 ZCCHC24Q8N2G6 241 aaKnown RBP9□□□□□ -0.97
TPM3-212ENST00000368533 CCDC71LQ8N9Z2 235 aa9□□□□□ -0.97
TPM3-212ENST00000368533 DIRC2Q96SL1 478 aa9□□□□□ -0.97
TPM3-212ENST00000368533 PLEKHA2Q9HB19 425 aa9□□□□□ -0.97
TPM3-212ENST00000368533 WNT9BO14905 357 aa9□□□□□ -0.97
TPM3-212ENST00000368533 IGKV3-15P01624 115 aa9□□□□□ -0.97
TPM3-212ENST00000368533 MMP9P14780 707 aa9□□□□□ -0.97
TPM3-212ENST00000368533 GNRHRP30968 328 aa9□□□□□ -0.97
TPM3-212ENST00000368533 CEACAM21Q3KPI0 293 aa9□□□□□ -0.97
TPM3-212ENST00000368533 ZNF695Q8IW36 515 aa9□□□□□ -0.97
TPM3-212ENST00000368533 POMT1Q9Y6A1 747 aa9□□□□□ -0.97
TPM3-212ENST00000368533 TNFSF12O43508 249 aa8.99□□□□□ -0.97
TPM3-212ENST00000368533 TCF21O43680 179 aa8.99□□□□□ -0.97
TPM3-212ENST00000368533 GRNP28799 593 aaKnown RBP8.99□□□□□ -0.97
TPM3-212ENST00000368533 CCKARP32238 428 aa8.99□□□□□ -0.97
TPM3-212ENST00000368533 TFPI2P48307 235 aa8.99□□□□□ -0.97
TPM3-212ENST00000368533 SPRNQ5BIV9 151 aa8.99□□□□□ -0.97
TPM3-212ENST00000368533 ARSJQ5FYB0 599 aaPredicted RBP8.99□□□□□ -0.97
TPM3-212ENST00000368533 SLC35G3Q8N808 338 aa8.99□□□□□ -0.97
TPM3-212ENST00000368533 CYB561D1Q8N8Q1 229 aa8.99□□□□□ -0.97
TPM3-212ENST00000368533 LYPD6BQ8NI32 183 aa8.99□□□□□ -0.97
TPM3-212ENST00000368533 FAM210BQ96KR6 192 aa8.99□□□□□ -0.97
TPM3-212ENST00000368533 TP53RKQ96S44 253 aa8.99□□□□□ -0.97
TPM3-212ENST00000368533 SLC25A15Q9Y619 301 aa8.99□□□□□ -0.97
TPM3-212ENST00000368533 A8MXE2 369 aa8.99□□□□□ -0.97
TPM3-212ENST00000368533 TRAPPC2LH3BP13 241 aa8.99□□□□□ -0.97
TPM3-212ENST00000368533 HSD17B6O14756 317 aa8.99□□□□□ -0.97
TPM3-212ENST00000368533 PPYP01298 95 aa8.99□□□□□ -0.97
TPM3-212ENST00000368533 TK1P04183 234 aa8.99□□□□□ -0.97
TPM3-212ENST00000368533 ZNF705AQ6ZN79 300 aaPredicted RBP8.99□□□□□ -0.97
TPM3-212ENST00000368533 OR5P3Q8WZ94 311 aa8.99□□□□□ -0.97
TPM3-212ENST00000368533 ELOVL1Q9BW60 279 aa8.99□□□□□ -0.97
TPM3-212ENST00000368533 TUBD1Q9UJT1 453 aa8.99□□□□□ -0.97
TPM3-212ENST00000368533 M0R143 59 aa8.98□□□□□ -0.97
TPM3-212ENST00000368533 DANCRP0C864 163 aa8.98□□□□□ -0.97
TPM3-212ENST00000368533 CD33P20138 364 aa8.98□□□□□ -0.97
TPM3-212ENST00000368533 MAS1LP35410 378 aa8.98□□□□□ -0.97
TPM3-212ENST00000368533 MRPS11P82912 194 aaKnown RBP8.98□□□□□ -0.97
TPM3-212ENST00000368533 TLE1Q04724 770 aa8.98□□□□□ -0.97
TPM3-212ENST00000368533 Q6ZSR3 168 aa8.98□□□□□ -0.97
TPM3-212ENST00000368533 ZNF429Q86V71 674 aa8.98□□□□□ -0.97
TPM3-212ENST00000368533 OR5R1Q8NH85 324 aa8.98□□□□□ -0.97
TPM3-212ENST00000368533 ZNF391Q9UJN7 358 aa8.98□□□□□ -0.97
TPM3-212ENST00000368533 ELOA3CA0A087WX78 387 aaPredicted RBP8.98□□□□□ -0.97
TPM3-212ENST00000368533 C3orf85A0A1B0GTC6 90 aa8.98□□□□□ -0.97
TPM3-212ENST00000368533 NKX2-6A6NCS4 301 aa8.98□□□□□ -0.97
TPM3-212ENST00000368533 FAM24AA6NFZ4 105 aa8.98□□□□□ -0.97
TPM3-212ENST00000368533 SIRPB1O00241 398 aa8.98□□□□□ -0.97
TPM3-212ENST00000368533 MLNRO43193 412 aa8.98□□□□□ -0.97
TPM3-212ENST00000368533 TIMP3P35625 211 aa8.98□□□□□ -0.97
TPM3-212ENST00000368533 CEACAM6P40199 344 aa8.98□□□□□ -0.97
TPM3-212ENST00000368533 VAMP2P63027 116 aa8.98□□□□□ -0.97
TPM3-212ENST00000368533 ZNF154Q13106 437 aa8.98□□□□□ -0.97
TPM3-212ENST00000368533 P2RY6Q15077 328 aa8.98□□□□□ -0.97
TPM3-212ENST00000368533 CDSNQ15517 529 aa8.98□□□□□ -0.97
TPM3-212ENST00000368533 PRSS8Q16651 343 aa8.98□□□□□ -0.97
TPM3-212ENST00000368533 WDR25Q64LD2 544 aaPredicted RBP8.98□□□□□ -0.97
TPM3-212ENST00000368533 TMEM217Q8N7C4 229 aa8.98□□□□□ -0.97
TPM3-212ENST00000368533 OR2Z1Q8NG97 314 aa8.98□□□□□ -0.97
TPM3-212ENST00000368533 UTP20O75691 2785 aaKnown RBP8.98□□□□□ -0.97
TPM3-212ENST00000368533 MPPED1O15442 326 aa8.98□□□□□ -0.97
TPM3-212ENST00000368533 SPRY3O43610 288 aa8.98□□□□□ -0.97
TPM3-212ENST00000368533 GPR137BO60478 399 aa8.98□□□□□ -0.97
TPM3-212ENST00000368533 SCTP09683 121 aa8.98□□□□□ -0.97
TPM3-212ENST00000368533 EPHA1P21709 976 aa8.98□□□□□ -0.97
TPM3-212ENST00000368533 GCH1P30793 250 aa8.98□□□□□ -0.97
TPM3-212ENST00000368533 CEACAM8P31997 349 aaPredicted RBP8.98□□□□□ -0.97
TPM3-212ENST00000368533 COTL1Q14019 142 aa8.98□□□□□ -0.97
TPM3-212ENST00000368533 DAZAP2Q15038 168 aaPredicted RBP8.98□□□□□ -0.97
TPM3-212ENST00000368533 Q6ZR03 302 aa8.98□□□□□ -0.97
TPM3-212ENST00000368533 MKXQ8IYA7 352 aa8.98□□□□□ -0.97
TPM3-212ENST00000368533 SCCPDHQ8NBX0 429 aa8.98□□□□□ -0.97
TPM3-212ENST00000368533 IL1F10Q8WWZ1 152 aa8.98□□□□□ -0.97
TPM3-212ENST00000368533 MOB3AQ96BX8 217 aa8.98□□□□□ -0.97
TPM3-212ENST00000368533 NOL4LQ96MY1 436 aaPredicted RBP8.98□□□□□ -0.97
TPM3-212ENST00000368533 PPIAL4AQ9Y536 164 aa8.98□□□□□ -0.97
TPM3-212ENST00000368533 USP24Q9UPU5 2620 aa8.97□□□□□ -0.97
TPM3-212ENST00000368533 SSSCA1O60232 199 aa8.97□□□□□ -0.97
TPM3-212ENST00000368533 GAPDHP04406 335 aaKnown RBP8.97□□□□□ -0.97
TPM3-212ENST00000368533 TUBG1P23258 451 aa8.97□□□□□ -0.97
TPM3-212ENST00000368533 S100A7P31151 101 aa8.97□□□□□ -0.97
TPM3-212ENST00000368533 RND3P61587 244 aa8.97□□□□□ -0.97
TPM3-212ENST00000368533 FAM201AQ5SY85 155 aa8.97□□□□□ -0.97
TPM3-212ENST00000368533 CRYBG3Q68DQ2 2970 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms