RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 TNFRSF9Q07011 255 aa9.99□□□□□ -0.81
COPA-202ENST00000368069 ETFRF1Q6IPR1 90 aa9.99□□□□□ -0.81
COPA-202ENST00000368069 RPEQ96AT9 228 aa9.99□□□□□ -0.81
COPA-202ENST00000368069 ZNF703Q9H7S9 590 aaPredicted RBP9.99□□□□□ -0.81
COPA-202ENST00000368069 PLXNA2O75051 1894 aa9.99□□□□□ -0.81
COPA-202ENST00000368069 IGKV1D-8A0A087WSZ0 117 aa9.99□□□□□ -0.81
COPA-202ENST00000368069 F8VVB4 439 aa9.99□□□□□ -0.81
COPA-202ENST00000368069 F8VWA3 439 aa9.99□□□□□ -0.81
COPA-202ENST00000368069 MMP7P09237 267 aaPredicted RBP9.99□□□□□ -0.81
COPA-202ENST00000368069 C17orf82Q86X59 251 aaPredicted RBP9.99□□□□□ -0.81
COPA-202ENST00000368069 OR1L4Q8NGR5 311 aa9.99□□□□□ -0.81
COPA-202ENST00000368069 LSM10Q969L4 123 aaKnown RBP9.99□□□□□ -0.81
COPA-202ENST00000368069 NOL4LQ96MY1 436 aaPredicted RBP9.99□□□□□ -0.81
COPA-202ENST00000368069 PRDM6Q9NQX0 595 aa9.99□□□□□ -0.81
COPA-202ENST00000368069 FOXJ2Q9P0K8 574 aa9.99□□□□□ -0.81
COPA-202ENST00000368069 EP400Q96L91 3159 aa9.98□□□□□ -0.81
COPA-202ENST00000368069 A0A1W2PN81 502 aa9.98□□□□□ -0.81
COPA-202ENST00000368069 NKX2-8O15522 239 aa9.98□□□□□ -0.81
COPA-202ENST00000368069 SRSF10O75494 262 aaKnown RBP9.98□□□□□ -0.81
COPA-202ENST00000368069 FAM157CP0CG43 387 aa9.98□□□□□ -0.81
COPA-202ENST00000368069 CCKARP32238 428 aa9.98□□□□□ -0.81
COPA-202ENST00000368069 RNASEKQ6P5S7 137 aaKnown RBP9.98□□□□□ -0.81
COPA-202ENST00000368069 DRAM1Q8N682 238 aa9.98□□□□□ -0.81
COPA-202ENST00000368069 OR8G5Q8NG78 346 aa9.98□□□□□ -0.81
COPA-202ENST00000368069 POM121Q96HA1 1249 aa9.98□□□□□ -0.81
COPA-202ENST00000368069 ONECUT1Q9UBC0 465 aa9.98□□□□□ -0.81
COPA-202ENST00000368069 G0S2P27469 103 aa9.98□□□□□ -0.81
COPA-202ENST00000368069 WDR73Q6P4I2 378 aa9.98□□□□□ -0.81
COPA-202ENST00000368069 KLHDC1Q8N7A1 406 aa9.98□□□□□ -0.81
COPA-202ENST00000368069 VSTM2AQ8TAG5 236 aa9.98□□□□□ -0.81
COPA-202ENST00000368069 KLF14Q8TD94 323 aaPredicted RBP9.98□□□□□ -0.81
COPA-202ENST00000368069 HARBI1Q96MB7 349 aa9.98□□□□□ -0.81
COPA-202ENST00000368069 ABHD14AQ9BUJ0 271 aa9.98□□□□□ -0.81
COPA-202ENST00000368069 C1QTNF5Q9BXJ0 243 aa9.98□□□□□ -0.81
COPA-202ENST00000368069 FAM90A26D6RGX4 464 aa9.98□□□□□ -0.81
COPA-202ENST00000368069 ZG16O60844 167 aa9.98□□□□□ -0.81
COPA-202ENST00000368069 S1PR2O95136 353 aa9.98□□□□□ -0.81
COPA-202ENST00000368069 CD82P27701 267 aa9.98□□□□□ -0.81
COPA-202ENST00000368069 HFEQ30201 348 aa9.98□□□□□ -0.81
COPA-202ENST00000368069 RND1Q92730 232 aa9.98□□□□□ -0.81
COPA-202ENST00000368069 CISD1Q9NZ45 108 aaKnown RBP9.98□□□□□ -0.81
COPA-202ENST00000368069 IL36RNQ9UBH0 155 aa9.98□□□□□ -0.81
COPA-202ENST00000368069 PXMP4Q9Y6I8 212 aa9.98□□□□□ -0.81
COPA-202ENST00000368069 PLXND1Q9Y4D7 1925 aa9.98□□□□□ -0.81
COPA-202ENST00000368069 J3QR06 171 aa9.98□□□□□ -0.81
COPA-202ENST00000368069 AMTP48728 403 aa9.98□□□□□ -0.81
COPA-202ENST00000368069 LOC102723996A0A087X1L8 192 aa9.97□□□□□ -0.81
COPA-202ENST00000368069 FGF16O43320 207 aa9.97□□□□□ -0.81
COPA-202ENST00000368069 RHBDL1O75783 438 aa9.97□□□□□ -0.81
COPA-202ENST00000368069 UCP1P25874 307 aa9.97□□□□□ -0.81
COPA-202ENST00000368069 CAMPP49913 170 aa9.97□□□□□ -0.81
COPA-202ENST00000368069 OR1L6Q8NGR2 347 aa9.97□□□□□ -0.81
COPA-202ENST00000368069 OR2V2Q96R30 315 aa9.97□□□□□ -0.81
COPA-202ENST00000368069 SAP30LQ9HAJ7 183 aa9.97□□□□□ -0.81
COPA-202ENST00000368069 NDUFB4O95168 129 aa9.97□□□□□ -0.81
COPA-202ENST00000368069 PGA5P0DJD9 388 aa9.97□□□□□ -0.81
COPA-202ENST00000368069 CTSSP25774 331 aa9.97□□□□□ -0.81
COPA-202ENST00000368069 TNXAQ16473 311 aa9.97□□□□□ -0.81
COPA-202ENST00000368069 TMEM183BQ1AE95 376 aa9.97□□□□□ -0.81
COPA-202ENST00000368069 SPNS3Q6ZMD2 512 aa9.97□□□□□ -0.81
COPA-202ENST00000368069 TIPARPQ7Z3E1 657 aaKnown RBP9.97□□□□□ -0.81
COPA-202ENST00000368069 SGMS2Q8NHU3 365 aa9.97□□□□□ -0.81
COPA-202ENST00000368069 P2RX4Q99571 388 aa9.97□□□□□ -0.81
COPA-202ENST00000368069 OR51B2Q9Y5P1 312 aa9.97□□□□□ -0.81
COPA-202ENST00000368069 RAB29O14966 203 aa9.97□□□□□ -0.81
COPA-202ENST00000368069 MPV17P39210 176 aa9.97□□□□□ -0.81
COPA-202ENST00000368069 FAM3BP58499 235 aaPredicted RBP9.97□□□□□ -0.81
COPA-202ENST00000368069 SPCS3P61009 180 aa9.97□□□□□ -0.81
COPA-202ENST00000368069 FOXC1Q12948 553 aa9.97□□□□□ -0.81
COPA-202ENST00000368069 WDR25Q64LD2 544 aaPredicted RBP9.97□□□□□ -0.81
COPA-202ENST00000368069 TCTEX1D1Q8N7M0 179 aa9.97□□□□□ -0.81
COPA-202ENST00000368069 OR1B1Q8NGR6 318 aa9.97□□□□□ -0.81
COPA-202ENST00000368069 RNF2Q99496 336 aa9.97□□□□□ -0.81
COPA-202ENST00000368069 REPIN1Q9BWE0 567 aaKnown RBP9.97□□□□□ -0.81
COPA-202ENST00000368069 REG4Q9BYZ8 158 aa9.97□□□□□ -0.81
COPA-202ENST00000368069 ZNF71Q9NQZ8 489 aaPredicted RBP9.97□□□□□ -0.81
COPA-202ENST00000368069 RPRMQ9NS64 109 aa9.97□□□□□ -0.81
COPA-202ENST00000368069 SCN8AQ9UQD0 1980 aa9.97□□□□□ -0.81
COPA-202ENST00000368069 NOTCH4Q99466 2003 aa9.97□□□□□ -0.81
COPA-202ENST00000368069 HELTA6NFD8 242 aa9.97□□□□□ -0.81
COPA-202ENST00000368069 HNRNPA3P51991 378 aaKnown RBP9.97□□□□□ -0.81
COPA-202ENST00000368069 OR5I1Q13606 314 aa9.97□□□□□ -0.81
COPA-202ENST00000368069 ZNF343Q6P1L6 599 aa9.97□□□□□ -0.81
COPA-202ENST00000368069 RNF144BQ7Z419 303 aa9.97□□□□□ -0.81
COPA-202ENST00000368069 RTN4RL2Q86UN3 420 aa9.97□□□□□ -0.81
COPA-202ENST00000368069 RAB24Q969Q5 203 aa9.97□□□□□ -0.81
COPA-202ENST00000368069 NPVFQ9HCQ7 196 aa9.97□□□□□ -0.81
COPA-202ENST00000368069 PLSCR2Q9NRY7 297 aa9.97□□□□□ -0.81
COPA-202ENST00000368069 IER3P46695 156 aa9.96□□□□□ -0.81
COPA-202ENST00000368069 GLIPR1P48060 266 aa9.96□□□□□ -0.81
COPA-202ENST00000368069 MRPL54Q6P161 138 aaKnown RBP9.96□□□□□ -0.81
COPA-202ENST00000368069 BCL2L2Q92843 193 aaPredicted RBP9.96□□□□□ -0.81
COPA-202ENST00000368069 PCGF1Q9BSM1 259 aa9.96□□□□□ -0.81
COPA-202ENST00000368069 BARX1Q9HBU1 254 aaPredicted RBP9.96□□□□□ -0.81
COPA-202ENST00000368069 PRR33A8MZF0 331 aa9.96□□□□□ -0.82
COPA-202ENST00000368069 ZNF506Q5JVG8 444 aa9.96□□□□□ -0.82
COPA-202ENST00000368069 GLRX5Q86SX6 157 aa9.96□□□□□ -0.82
COPA-202ENST00000368069 FLYWCH2Q96CP2 140 aaKnown RBP9.96□□□□□ -0.82
COPA-202ENST00000368069 CACNA1DQ01668 2161 aa9.96□□□□□ -0.82
COPA-202ENST00000368069 LOC102723971A0A1B0GUV8 181 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms