RNA–Protein interactions for RNA: ENST00000366746.7

MRPL55-217, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-217ENST00000366746 MAPK3P27361 379 aaPredicted RBP12.78□□□□□ -0.36
MRPL55-217ENST00000366746 RPS16P62249 146 aaKnown RBP12.78□□□□□ -0.36
MRPL55-217ENST00000366746 KLF5Q13887 457 aaPredicted RBP12.78□□□□□ -0.36
MRPL55-217ENST00000366746 FXYD3Q14802 87 aa12.78□□□□□ -0.36
MRPL55-217ENST00000366746 MOGAT2Q3SYC2 334 aa12.78□□□□□ -0.36
MRPL55-217ENST00000366746 C6orf201Q7Z4U5 140 aa12.78□□□□□ -0.36
MRPL55-217ENST00000366746 GTSCR1Q86UQ5 136 aa12.78□□□□□ -0.36
MRPL55-217ENST00000366746 SVOPQ8N4V2 548 aa12.78□□□□□ -0.36
MRPL55-217ENST00000366746 ZNF485Q8NCK3 441 aa12.78□□□□□ -0.36
MRPL55-217ENST00000366746 OR5T1Q8NG75 326 aa12.78□□□□□ -0.36
MRPL55-217ENST00000366746 OR9G4Q8NGQ1 327 aa12.78□□□□□ -0.36
MRPL55-217ENST00000366746 GRPEL2Q8TAA5 225 aa12.78□□□□□ -0.36
MRPL55-217ENST00000366746 THRSPQ92748 146 aa12.78□□□□□ -0.36
MRPL55-217ENST00000366746 TMED9Q9BVK6 235 aa12.78□□□□□ -0.36
MRPL55-217ENST00000366746 SMPD3Q9NY59 655 aaPredicted RBP12.78□□□□□ -0.36
MRPL55-217ENST00000366746 ITGB1BP1O14713 200 aa12.77□□□□□ -0.37
MRPL55-217ENST00000366746 CNIH1O95406 144 aa12.77□□□□□ -0.37
MRPL55-217ENST00000366746 CELP19835 753 aa12.77□□□□□ -0.37
MRPL55-217ENST00000366746 CEACAM6P40199 344 aa12.77□□□□□ -0.37
MRPL55-217ENST00000366746 RPS27AP62979 156 aaKnown RBP12.77□□□□□ -0.37
MRPL55-217ENST00000366746 OR10K2Q6IF99 312 aa12.77□□□□□ -0.37
MRPL55-217ENST00000366746 MOB1BQ7L9L4 216 aa12.77□□□□□ -0.37
MRPL55-217ENST00000366746 POC5Q8NA72 575 aa12.77□□□□□ -0.37
MRPL55-217ENST00000366746 DRAXINQ8NBI3 349 aaPredicted RBP12.77□□□□□ -0.37
MRPL55-217ENST00000366746 EDARADDQ8WWZ3 215 aa12.77□□□□□ -0.37
MRPL55-217ENST00000366746 AGMATQ9BSE5 352 aa12.77□□□□□ -0.37
MRPL55-217ENST00000366746 PARP12Q9H0J9 701 aaKnown RBP12.77□□□□□ -0.37
MRPL55-217ENST00000366746 NKX1-2Q9UD57 310 aaPredicted RBP12.77□□□□□ -0.37
MRPL55-217ENST00000366746 H3BUA1 57 aa12.76□□□□□ -0.37
MRPL55-217ENST00000366746 DYNC1I1O14576 645 aa12.76□□□□□ -0.37
MRPL55-217ENST00000366746 SPDEFO95238 335 aa12.76□□□□□ -0.37
MRPL55-217ENST00000366746 NAPSAO96009 420 aa12.76□□□□□ -0.37
MRPL55-217ENST00000366746 ZBTB25P24278 435 aa12.76□□□□□ -0.37
MRPL55-217ENST00000366746 HTR2CP28335 458 aa12.76□□□□□ -0.37
MRPL55-217ENST00000366746 SYNJ2BPP57105 145 aa12.76□□□□□ -0.37
MRPL55-217ENST00000366746 ST3GAL4Q11206 333 aa12.76□□□□□ -0.37
MRPL55-217ENST00000366746 TATDN3Q17R31 274 aa12.76□□□□□ -0.37
MRPL55-217ENST00000366746 ZNF880Q6PDB4 577 aa12.76□□□□□ -0.37
MRPL55-217ENST00000366746 PQLC1Q8N2U9 271 aa12.76□□□□□ -0.37
MRPL55-217ENST00000366746 IL17DQ8TAD2 202 aa12.76□□□□□ -0.37
MRPL55-217ENST00000366746 TMEM59Q9BXS4 323 aa12.76□□□□□ -0.37
MRPL55-217ENST00000366746 C11orf54Q9H0W9 315 aaPredicted RBP12.76□□□□□ -0.37
MRPL55-217ENST00000366746 RIMS4Q9H426 269 aaPredicted RBP12.76□□□□□ -0.37
MRPL55-217ENST00000366746 S100A14Q9HCY8 104 aa12.76□□□□□ -0.37
MRPL55-217ENST00000366746 PLEKHJ1Q9NW61 149 aa12.76□□□□□ -0.37
MRPL55-217ENST00000366746 FAM53CQ9NYF3 392 aa12.76□□□□□ -0.37
MRPL55-217ENST00000366746 ZNF221Q9UK13 617 aa12.76□□□□□ -0.37
MRPL55-217ENST00000366746 IGKV1-16P04430 117 aa12.75□□□□□ -0.37
MRPL55-217ENST00000366746 CD1AP06126 327 aa12.75□□□□□ -0.37
MRPL55-217ENST00000366746 SNRPBP14678 240 aaKnown RBP12.75□□□□□ -0.37
MRPL55-217ENST00000366746 LCN12Q6JVE5 192 aa12.75□□□□□ -0.37
MRPL55-217ENST00000366746 IL34Q6ZMJ4 242 aa12.75□□□□□ -0.37
MRPL55-217ENST00000366746 KCNG3Q8TAE7 436 aa12.75□□□□□ -0.37
MRPL55-217ENST00000366746 GGHQ92820 318 aa12.75□□□□□ -0.37
MRPL55-217ENST00000366746 EFCAB10A6NFE3 127 aa12.74□□□□□ -0.37
MRPL55-217ENST00000366746 SLC25A17O43808 307 aa12.74□□□□□ -0.37
MRPL55-217ENST00000366746 APOA2P02652 100 aa12.74□□□□□ -0.37
MRPL55-217ENST00000366746 AADACP22760 399 aa12.74□□□□□ -0.37
MRPL55-217ENST00000366746 GLT8D1Q68CQ7 371 aa12.74□□□□□ -0.37
MRPL55-217ENST00000366746 PDPNQ86YL7 162 aa12.74□□□□□ -0.37
MRPL55-217ENST00000366746 ZNF383Q8NA42 475 aa12.74□□□□□ -0.37
MRPL55-217ENST00000366746 SETD9Q8NE22 299 aa12.74□□□□□ -0.37
MRPL55-217ENST00000366746 CYGBQ8WWM9 190 aa12.74□□□□□ -0.37
MRPL55-217ENST00000366746 TMEM68Q96MH6 324 aa12.74□□□□□ -0.37
MRPL55-217ENST00000366746 OR1A1Q9P1Q5 309 aa12.74□□□□□ -0.37
MRPL55-217ENST00000366746 PEF1Q9UBV8 284 aaKnown RBP12.74□□□□□ -0.37
MRPL55-217ENST00000366746 MYL12BO14950 172 aa12.73□□□□□ -0.37
MRPL55-217ENST00000366746 PROP1O75360 226 aa12.73□□□□□ -0.37
MRPL55-217ENST00000366746 C1orf100Q5SVJ3 147 aa12.73□□□□□ -0.37
MRPL55-217ENST00000366746 TTC23Q5W5X9 447 aa12.73□□□□□ -0.37
MRPL55-217ENST00000366746 Q8N402 240 aa12.73□□□□□ -0.37
MRPL55-217ENST00000366746 PTX4Q96A99 478 aa12.73□□□□□ -0.37
MRPL55-217ENST00000366746 NICN1Q9BSH3 213 aa12.73□□□□□ -0.37
MRPL55-217ENST00000366746 TM2D1Q9BX74 207 aa12.73□□□□□ -0.37
MRPL55-217ENST00000366746 MGAT4AQ9UM21 535 aa12.73□□□□□ -0.37
MRPL55-217ENST00000366746 TRBV6-6A0A0A6YYG2 114 aa12.72□□□□□ -0.37
MRPL55-217ENST00000366746 LGALS7P47929 136 aa12.72□□□□□ -0.37
MRPL55-217ENST00000366746 WNT4P56705 351 aa12.72□□□□□ -0.37
MRPL55-217ENST00000366746 LINC00205P59089 165 aa12.72□□□□□ -0.37
MRPL55-217ENST00000366746 HLA-DRB3P79483 266 aa12.72□□□□□ -0.37
MRPL55-217ENST00000366746 ACSM3Q53FZ2 586 aa12.72□□□□□ -0.37
MRPL55-217ENST00000366746 TINAGL1Q9GZM7 467 aaPredicted RBP12.72□□□□□ -0.37
MRPL55-217ENST00000366746 SIGLEC8Q9NYZ4 499 aa12.72□□□□□ -0.37
MRPL55-217ENST00000366746 BRI3O95415 125 aa12.71□□□□□ -0.37
MRPL55-217ENST00000366746 CSN3P07498 182 aa12.71□□□□□ -0.37
MRPL55-217ENST00000366746 SCTP09683 121 aa12.71□□□□□ -0.37
MRPL55-217ENST00000366746 PJVKQ0ZLH3 352 aa12.71□□□□□ -0.37
MRPL55-217ENST00000366746 UNC119Q13432 240 aa12.71□□□□□ -0.37
MRPL55-217ENST00000366746 INSL4Q14641 139 aa12.71□□□□□ -0.37
MRPL55-217ENST00000366746 RPEL1Q2QD12 228 aa12.71□□□□□ -0.37
MRPL55-217ENST00000366746 ZNF343Q6P1L6 599 aa12.71□□□□□ -0.37
MRPL55-217ENST00000366746 MS4A15Q8N5U1 240 aa12.71□□□□□ -0.37
MRPL55-217ENST00000366746 PHYHIPQ92561 330 aa12.71□□□□□ -0.37
MRPL55-217ENST00000366746 USMG5Q96IX5 58 aa12.71□□□□□ -0.37
MRPL55-217ENST00000366746 THAP7Q9BT49 309 aaPredicted RBP12.71□□□□□ -0.37
MRPL55-217ENST00000366746 SLC35D1Q9NTN3 355 aa12.71□□□□□ -0.37
MRPL55-217ENST00000366746 COA4Q9NYJ1 87 aa12.71□□□□□ -0.37
MRPL55-217ENST00000366746 AK3Q9UIJ7 227 aa12.71□□□□□ -0.37
MRPL55-217ENST00000366746 CEPT1Q9Y6K0 416 aa12.71□□□□□ -0.37
MRPL55-217ENST00000366746 CSMD3Q7Z407 3707 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms