RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 SDK2Q58EX2 2172 aa1.72□□□□□ -2.13
RNU6-28P-201ENST00000362378 C5orf49A4QMS7 147 aa1.72□□□□□ -2.13
RNU6-28P-201ENST00000362378 SDHAF1A6NFY7 115 aa1.72□□□□□ -2.13
RNU6-28P-201ENST00000362378 LRRN3E7EW58 273 aa1.72□□□□□ -2.13
RNU6-28P-201ENST00000362378 H0Y980 276 aa1.72□□□□□ -2.13
RNU6-28P-201ENST00000362378 GSTZ1O43708 216 aaPredicted RBP1.72□□□□□ -2.13
RNU6-28P-201ENST00000362378 LY6HO94772 140 aa1.72□□□□□ -2.13
RNU6-28P-201ENST00000362378 ESDP10768 282 aa1.72□□□□□ -2.13
RNU6-28P-201ENST00000362378 SLC25A16P16260 332 aa1.72□□□□□ -2.13
RNU6-28P-201ENST00000362378 DDTP30046 118 aa1.72□□□□□ -2.13
RNU6-28P-201ENST00000362378 MAGOHP61326 146 aaKnown RBP1.72□□□□□ -2.13
RNU6-28P-201ENST00000362378 UBE2IP63279 158 aaKnown RBP1.72□□□□□ -2.13
RNU6-28P-201ENST00000362378 HLA-DRB3P79483 266 aa1.72□□□□□ -2.13
RNU6-28P-201ENST00000362378 ZNF117Q03924 483 aa1.72□□□□□ -2.13
RNU6-28P-201ENST00000362378 N4BP2L1Q5TBK1 243 aaPredicted RBP1.72□□□□□ -2.13
RNU6-28P-201ENST00000362378 OGFRL1Q5TC84 451 aaPredicted RBP1.72□□□□□ -2.13
RNU6-28P-201ENST00000362378 RASL11AQ6T310 242 aa1.72□□□□□ -2.13
RNU6-28P-201ENST00000362378 LRRN1Q6UXK5 716 aa1.72□□□□□ -2.13
RNU6-28P-201ENST00000362378 MNS1Q8NEH6 495 aa1.72□□□□□ -2.13
RNU6-28P-201ENST00000362378 OR11H1Q8NG94 326 aa1.72□□□□□ -2.13
RNU6-28P-201ENST00000362378 OR2D3Q8NGH3 330 aa1.72□□□□□ -2.13
RNU6-28P-201ENST00000362378 OR10A6Q8NH74 314 aa1.72□□□□□ -2.13
RNU6-28P-201ENST00000362378 FNDC9Q8TBE3 224 aa1.72□□□□□ -2.13
RNU6-28P-201ENST00000362378 PIGXQ8TBF5 258 aa1.72□□□□□ -2.13
RNU6-28P-201ENST00000362378 EEF1AKMT1Q8WVE0 214 aa1.72□□□□□ -2.13
RNU6-28P-201ENST00000362378 RNF133Q8WVZ7 376 aa1.72□□□□□ -2.13
RNU6-28P-201ENST00000362378 MS4A6EQ96DS6 147 aa1.72□□□□□ -2.13
RNU6-28P-201ENST00000362378 CPNE2Q96FN4 548 aaPredicted RBP1.72□□□□□ -2.13
RNU6-28P-201ENST00000362378 MND1Q9BWT6 205 aa1.72□□□□□ -2.13
RNU6-28P-201ENST00000362378 NKX6-2Q9C056 277 aaPredicted RBP1.72□□□□□ -2.13
RNU6-28P-201ENST00000362378 MAP1LC3AQ9H492 121 aa1.72□□□□□ -2.13
RNU6-28P-201ENST00000362378 HES4Q9HCC6 221 aa1.72□□□□□ -2.13
RNU6-28P-201ENST00000362378 FGFR1OP2Q9NVK5 253 aa1.72□□□□□ -2.13
RNU6-28P-201ENST00000362378 POLR1DQ9Y2S0 133 aa1.72□□□□□ -2.13
RNU6-28P-201ENST00000362378 PLCH2O75038 1416 aa1.72□□□□□ -2.13
RNU6-28P-201ENST00000362378 C19orf71A6NCJ1 209 aa1.71□□□□□ -2.14
RNU6-28P-201ENST00000362378 C21orf140B9A014 251 aa1.71□□□□□ -2.14
RNU6-28P-201ENST00000362378 M0R381 172 aa1.71□□□□□ -2.14
RNU6-28P-201ENST00000362378 SLC17A3O00476 420 aa1.71□□□□□ -2.14
RNU6-28P-201ENST00000362378 MT-CO2P00403 227 aa1.71□□□□□ -2.14
RNU6-28P-201ENST00000362378 CCL3P10147 92 aa1.71□□□□□ -2.14
RNU6-28P-201ENST00000362378 CD36P16671 472 aa1.71□□□□□ -2.14
RNU6-28P-201ENST00000362378 LPAR6P43657 344 aa1.71□□□□□ -2.14
RNU6-28P-201ENST00000362378 TAS2R45P59539 299 aa1.71□□□□□ -2.14
RNU6-28P-201ENST00000362378 PPP1R1AQ13522 171 aa1.71□□□□□ -2.14
RNU6-28P-201ENST00000362378 GNA13Q14344 377 aa1.71□□□□□ -2.14
RNU6-28P-201ENST00000362378 PTRHD1Q6GMV3 140 aaKnown RBP1.71□□□□□ -2.14
RNU6-28P-201ENST00000362378 NAA40Q86UY6 237 aa1.71□□□□□ -2.14
RNU6-28P-201ENST00000362378 C1orf174Q8IYL3 243 aa1.71□□□□□ -2.14
RNU6-28P-201ENST00000362378 TMEM161BQ8NDZ6 487 aa1.71□□□□□ -2.14
RNU6-28P-201ENST00000362378 SPZ1Q9BXG8 430 aa1.71□□□□□ -2.14
RNU6-28P-201ENST00000362378 AICDAQ9GZX7 198 aa1.71□□□□□ -2.14
RNU6-28P-201ENST00000362378 SNX12Q9UMY4 172 aa1.71□□□□□ -2.14
RNU6-28P-201ENST00000362378 C9orf84Q5VXU9 1444 aa1.71□□□□□ -2.14
RNU6-28P-201ENST00000362378 LCTP09848 1927 aa1.7□□□□□ -2.14
RNU6-28P-201ENST00000362378 IGHV3-73A0A0B4J1V6 119 aa1.7□□□□□ -2.14
RNU6-28P-201ENST00000362378 C3orf84H3BNL1 204 aa1.7□□□□□ -2.14
RNU6-28P-201ENST00000362378 AHSA1O95433 338 aa1.7□□□□□ -2.14
RNU6-28P-201ENST00000362378 SOD1P00441 154 aa1.7□□□□□ -2.14
RNU6-28P-201ENST00000362378 IL3P08700 152 aa1.7□□□□□ -2.14
RNU6-28P-201ENST00000362378 KRT7P08729 469 aa1.7□□□□□ -2.14
RNU6-28P-201ENST00000362378 CRHBPP24387 322 aa1.7□□□□□ -2.14
RNU6-28P-201ENST00000362378 CRYBB3P26998 211 aa1.7□□□□□ -2.14
RNU6-28P-201ENST00000362378 RPL12P30050 165 aaKnown RBP1.7□□□□□ -2.14
RNU6-28P-201ENST00000362378 RWDD2BP57060 319 aa1.7□□□□□ -2.14
RNU6-28P-201ENST00000362378 BTN3A2P78410 334 aa1.7□□□□□ -2.14
RNU6-28P-201ENST00000362378 COQ5Q5HYK3 327 aa1.7□□□□□ -2.14
RNU6-28P-201ENST00000362378 ZNF322Q6U7Q0 402 aaPredicted RBP1.7□□□□□ -2.14
RNU6-28P-201ENST00000362378 OR5C1Q8NGR4 320 aa1.7□□□□□ -2.14
RNU6-28P-201ENST00000362378 JOSD2Q8TAC2 188 aa1.7□□□□□ -2.14
RNU6-28P-201ENST00000362378 ZCCHC13Q8WW36 166 aaKnown RBP1.7□□□□□ -2.14
RNU6-28P-201ENST00000362378 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.7□□□□□ -2.14
RNU6-28P-201ENST00000362378 MGLLQ99685 303 aa1.7□□□□□ -2.14
RNU6-28P-201ENST00000362378 TUBA4BQ9H853 241 aa1.7□□□□□ -2.14
RNU6-28P-201ENST00000362378 PSORS1C2Q9UIG4 136 aa1.7□□□□□ -2.14
RNU6-28P-201ENST00000362378 DKKL1Q9UK85 242 aa1.7□□□□□ -2.14
RNU6-28P-201ENST00000362378 POLR3HQ9Y535 204 aaPredicted RBP1.7□□□□□ -2.14
RNU6-28P-201ENST00000362378 DSCAML1Q8TD84 2053 aa1.7□□□□□ -2.14
RNU6-28P-201ENST00000362378 KMT2EQ8IZD2 1858 aa1.69□□□□□ -2.14
RNU6-28P-201ENST00000362378 LTBP2Q14767 1821 aa1.69□□□□□ -2.14
RNU6-28P-201ENST00000362378 GRIFINA4D1Z8 144 aa1.69□□□□□ -2.14
RNU6-28P-201ENST00000362378 C17orf51A8MQB3 221 aa1.69□□□□□ -2.14
RNU6-28P-201ENST00000362378 ODF3BA8MYP8 253 aa1.69□□□□□ -2.14
RNU6-28P-201ENST00000362378 CRTAPO75718 401 aaPredicted RBP1.69□□□□□ -2.14
RNU6-28P-201ENST00000362378 CPMP14384 443 aa1.69□□□□□ -2.14
RNU6-28P-201ENST00000362378 TMEM33P57088 247 aa1.69□□□□□ -2.14
RNU6-28P-201ENST00000362378 KRTAP10-1P60331 282 aa1.69□□□□□ -2.14
RNU6-28P-201ENST00000362378 HOXC5Q00444 222 aa1.69□□□□□ -2.14
RNU6-28P-201ENST00000362378 FOXF1Q12946 379 aa1.69□□□□□ -2.14
RNU6-28P-201ENST00000362378 JOSD1Q15040 202 aaPredicted RBP1.69□□□□□ -2.14
RNU6-28P-201ENST00000362378 UAP1Q16222 522 aaPredicted RBP1.69□□□□□ -2.14
RNU6-28P-201ENST00000362378 KRTAP6-3Q3LI67 103 aa1.69□□□□□ -2.14
RNU6-28P-201ENST00000362378 CD200R1LQ6Q8B3 271 aa1.69□□□□□ -2.14
RNU6-28P-201ENST00000362378 CCDC121Q6ZUS5 278 aa1.69□□□□□ -2.14
RNU6-28P-201ENST00000362378 BAP18Q8IXM2 172 aa1.69□□□□□ -2.14
RNU6-28P-201ENST00000362378 C10orf67Q8IYJ2 551 aa1.69□□□□□ -2.14
RNU6-28P-201ENST00000362378 LRRC34Q8IZ02 419 aa1.69□□□□□ -2.14
RNU6-28P-201ENST00000362378 OR4C16Q8NGL9 310 aa1.69□□□□□ -2.14
RNU6-28P-201ENST00000362378 PTH2Q96A98 100 aa1.69□□□□□ -2.14
RNU6-28P-201ENST00000362378 ANKRD36BP1Q96IX9 119 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms