RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 VSIG8P0DPA2 414 aa9.45□□□□□ -0.9
CLIP1-203ENST00000361654 FCGR2BP31994 310 aaPredicted RBP9.45□□□□□ -0.9
CLIP1-203ENST00000361654 HINT1P49773 126 aaPredicted RBP9.45□□□□□ -0.9
CLIP1-203ENST00000361654 TMEM50BP56557 158 aa9.45□□□□□ -0.9
CLIP1-203ENST00000361654 DSCR9P59020 149 aa9.45□□□□□ -0.9
CLIP1-203ENST00000361654 PAPPA-AS1Q5QFB9 102 aa9.45□□□□□ -0.9
CLIP1-203ENST00000361654 ZNF826PQ6ZT77 177 aa9.45□□□□□ -0.9
CLIP1-203ENST00000361654 PPP1R32Q7Z5V6 425 aa9.45□□□□□ -0.9
CLIP1-203ENST00000361654 LRP11Q86VZ4 500 aa9.45□□□□□ -0.9
CLIP1-203ENST00000361654 LSM10Q969L4 123 aaKnown RBP9.45□□□□□ -0.9
CLIP1-203ENST00000361654 ABHD14BQ96IU4 210 aa9.45□□□□□ -0.9
CLIP1-203ENST00000361654 KIF13BQ9NQT8 1826 aa9.45□□□□□ -0.9
CLIP1-203ENST00000361654 COX6CP09669 75 aa9.45□□□□□ -0.9
CLIP1-203ENST00000361654 IFI6P09912 130 aa9.45□□□□□ -0.9
CLIP1-203ENST00000361654 PTGDSP41222 190 aa9.45□□□□□ -0.9
CLIP1-203ENST00000361654 MGAT2Q10469 447 aa9.45□□□□□ -0.9
CLIP1-203ENST00000361654 HOGA1Q86XE5 327 aa9.45□□□□□ -0.9
CLIP1-203ENST00000361654 NRTNQ99748 197 aa9.45□□□□□ -0.9
CLIP1-203ENST00000361654 IGKV3D-11A0A0A0MRZ8 115 aa9.44□□□□□ -0.9
CLIP1-203ENST00000361654 A0A1W2PR77 199 aa9.44□□□□□ -0.9
CLIP1-203ENST00000361654 NKX2-6A6NCS4 301 aa9.44□□□□□ -0.9
CLIP1-203ENST00000361654 IGKV3-11P04433 115 aa9.44□□□□□ -0.9
CLIP1-203ENST00000361654 VSIG10L2P0DP72 767 aa9.44□□□□□ -0.9
CLIP1-203ENST00000361654 CIRBPQ14011 172 aaKnown RBP9.44□□□□□ -0.9
CLIP1-203ENST00000361654 PET117Q6UWS5 81 aa9.44□□□□□ -0.9
CLIP1-203ENST00000361654 HSPB7Q9UBY9 170 aa9.44□□□□□ -0.9
CLIP1-203ENST00000361654 NPIPB8E9PQR5 432 aa9.44□□□□□ -0.9
CLIP1-203ENST00000361654 ADAP1O75689 374 aa9.44□□□□□ -0.9
CLIP1-203ENST00000361654 TAS2R60P59551 318 aa9.44□□□□□ -0.9
CLIP1-203ENST00000361654 PRSS8Q16651 343 aa9.44□□□□□ -0.9
CLIP1-203ENST00000361654 LRRC75AQ8NAA5 344 aa9.44□□□□□ -0.9
CLIP1-203ENST00000361654 TMEM106BQ9NUM4 274 aa9.44□□□□□ -0.9
CLIP1-203ENST00000361654 DPM3Q9P2X0 92 aa9.44□□□□□ -0.9
CLIP1-203ENST00000361654 QTRT1Q9BXR0 403 aaKnown RBP9.44□□□□□ -0.9
CLIP1-203ENST00000361654 CDC42EP3Q9UKI2 254 aa9.44□□□□□ -0.9
CLIP1-203ENST00000361654 MYH14Q7Z406 1995 aaKnown RBP9.44□□□□□ -0.9
CLIP1-203ENST00000361654 RND2P52198 227 aa9.44□□□□□ -0.9
CLIP1-203ENST00000361654 OVCH2Q7RTZ1 564 aa9.44□□□□□ -0.9
CLIP1-203ENST00000361654 RTN4RL2Q86UN3 420 aa9.44□□□□□ -0.9
CLIP1-203ENST00000361654 RTN4RQ9BZR6 473 aa9.44□□□□□ -0.9
CLIP1-203ENST00000361654 TMEM140Q9NV12 185 aa9.44□□□□□ -0.9
CLIP1-203ENST00000361654 RCC2Q9P258 522 aaKnown RBP9.44□□□□□ -0.9
CLIP1-203ENST00000361654 NUP205Q92621 2012 aa9.43□□□□□ -0.9
CLIP1-203ENST00000361654 PAGE4O60829 102 aa9.43□□□□□ -0.9
CLIP1-203ENST00000361654 SULT1A2P50226 295 aa9.43□□□□□ -0.9
CLIP1-203ENST00000361654 LCN2P80188 198 aa9.43□□□□□ -0.9
CLIP1-203ENST00000361654 CEBPEQ15744 281 aa9.43□□□□□ -0.9
CLIP1-203ENST00000361654 SLC25A47Q6Q0C1 308 aa9.43□□□□□ -0.9
CLIP1-203ENST00000361654 SAXO1Q8IYX7 474 aa9.43□□□□□ -0.9
CLIP1-203ENST00000361654 ADAT3Q96EY9 351 aaPredicted RBP9.43□□□□□ -0.9
CLIP1-203ENST00000361654 PRSS22Q9GZN4 317 aa9.43□□□□□ -0.9
CLIP1-203ENST00000361654 V9GYH0 126 aa9.43□□□□□ -0.9
CLIP1-203ENST00000361654 CGB1A6NKQ9 187 aa9.43□□□□□ -0.9
CLIP1-203ENST00000361654 SNURFLB1AK76 121 aa9.43□□□□□ -0.9
CLIP1-203ENST00000361654 TRGC1P0CF51 173 aa9.43□□□□□ -0.9
CLIP1-203ENST00000361654 FOXL2P58012 376 aa9.43□□□□□ -0.9
CLIP1-203ENST00000361654 CX3CL1P78423 397 aa9.43□□□□□ -0.9
CLIP1-203ENST00000361654 FAM159AQ6UWV7 190 aa9.43□□□□□ -0.9
CLIP1-203ENST00000361654 DLEC1Q9Y238 1755 aa9.43□□□□□ -0.9
CLIP1-203ENST00000361654 B4DEV8 164 aa9.43□□□□□ -0.9
CLIP1-203ENST00000361654 TTRP02766 147 aa9.43□□□□□ -0.9
CLIP1-203ENST00000361654 EWSR1Q01844 656 aaKnown RBP eCLIP9.43□□□□□ -0.9
CLIP1-203ENST00000361654 MRPL54Q6P161 138 aaKnown RBP9.43□□□□□ -0.9
CLIP1-203ENST00000361654 C8orf46Q8TAG6 207 aa9.43□□□□□ -0.9
CLIP1-203ENST00000361654 ZNF502Q8TBZ5 544 aa9.43□□□□□ -0.9
CLIP1-203ENST00000361654 MRPL24Q96A35 216 aaKnown RBP9.43□□□□□ -0.9
CLIP1-203ENST00000361654 SOSTQ9BQB4 213 aa9.43□□□□□ -0.9
CLIP1-203ENST00000361654 M0QZK8 103 aa9.43□□□□□ -0.9
CLIP1-203ENST00000361654 SAMD13Q5VXD3 122 aa9.43□□□□□ -0.9
CLIP1-203ENST00000361654 TMEM101Q96IK0 257 aa9.43□□□□□ -0.9
CLIP1-203ENST00000361654 FAM74A7A6NL05 159 aa9.42□□□□□ -0.9
CLIP1-203ENST00000361654 H7C1H1 209 aa9.42□□□□□ -0.9
CLIP1-203ENST00000361654 FCGR3AP08637 254 aa9.42□□□□□ -0.9
CLIP1-203ENST00000361654 ASAH2BP0C7U1 165 aa9.42□□□□□ -0.9
CLIP1-203ENST00000361654 ST3GAL2Q16842 350 aa9.42□□□□□ -0.9
CLIP1-203ENST00000361654 ACSF3Q4G176 576 aaPredicted RBP9.42□□□□□ -0.9
CLIP1-203ENST00000361654 OR4A47Q6IF82 309 aa9.42□□□□□ -0.9
CLIP1-203ENST00000361654 HSPE1P61604 102 aaKnown RBP9.42□□□□□ -0.9
CLIP1-203ENST00000361654 NPFFO15130 113 aa9.42□□□□□ -0.9
CLIP1-203ENST00000361654 ATP5IP56385 69 aaPredicted RBP9.42□□□□□ -0.9
CLIP1-203ENST00000361654 DPPA3Q6W0C5 159 aa9.42□□□□□ -0.9
CLIP1-203ENST00000361654 ITLN2Q8WWU7 325 aaPredicted RBP9.42□□□□□ -0.9
CLIP1-203ENST00000361654 SCMH1Q96GD3 660 aa9.42□□□□□ -0.9
CLIP1-203ENST00000361654 RECKO95980 971 aa9.42□□□□□ -0.9
CLIP1-203ENST00000361654 INSL4Q14641 139 aa9.42□□□□□ -0.9
CLIP1-203ENST00000361654 C9orf62Q8N4C0 152 aa9.42□□□□□ -0.9
CLIP1-203ENST00000361654 ZPLD1Q8TCW7 415 aa9.42□□□□□ -0.9
CLIP1-203ENST00000361654 RAB37Q96AX2 223 aa9.42□□□□□ -0.9
CLIP1-203ENST00000361654 SPSB2Q99619 263 aa9.42□□□□□ -0.9
CLIP1-203ENST00000361654 TXNDC17Q9BRA2 123 aa9.42□□□□□ -0.9
CLIP1-203ENST00000361654 LINC00470Q9BZP3 86 aa9.42□□□□□ -0.9
CLIP1-203ENST00000361654 PXMP4Q9Y6I8 212 aa9.42□□□□□ -0.9
CLIP1-203ENST00000361654 H0Y980 276 aa9.42□□□□□ -0.9
CLIP1-203ENST00000361654 APCSP02743 223 aa9.42□□□□□ -0.9
CLIP1-203ENST00000361654 MMP9P14780 707 aa9.42□□□□□ -0.9
CLIP1-203ENST00000361654 ANOS1P23352 680 aa9.42□□□□□ -0.9
CLIP1-203ENST00000361654 FAM27E3Q08E93 113 aa9.42□□□□□ -0.9
CLIP1-203ENST00000361654 ZXDCQ2QGD7 858 aaPredicted RBP9.42□□□□□ -0.9
CLIP1-203ENST00000361654 LYZL2Q7Z4W2 148 aa9.42□□□□□ -0.9
CLIP1-203ENST00000361654 ZNF703Q9H7S9 590 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms