RNA–Protein interactions for RNA: ENST00000360238.6

CUEDC1-201, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CUEDC1, Length 2,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-201ENST00000360238 OR4C12Q96R67 309 aa22.03■■□□□ 1.12
CUEDC1-201ENST00000360238 HSD17B10Q99714 261 aaKnown RBP22.03■■□□□ 1.12
CUEDC1-201ENST00000360238 TIMM9Q9Y5J7 89 aa22.03■■□□□ 1.12
CUEDC1-201ENST00000360238 C17orf98A8MV24 154 aa22.02■■□□□ 1.12
CUEDC1-201ENST00000360238 RPL35P42766 123 aaKnown RBP22.02■■□□□ 1.12
CUEDC1-201ENST00000360238 ZNF787Q6DD87 383 aa22.02■■□□□ 1.12
CUEDC1-201ENST00000360238 OR2Z1Q8NG97 314 aa22.02■■□□□ 1.12
CUEDC1-201ENST00000360238 TTC28Q96AY4 2481 aa22.02■■□□□ 1.12
CUEDC1-201ENST00000360238 SEBOXQ9HB31 216 aaPredicted RBP22.02■■□□□ 1.12
CUEDC1-201ENST00000360238 SRRM5B3KS81 715 aa22.02■■□□□ 1.12
CUEDC1-201ENST00000360238 C15orf65H3BRN8 121 aa22.02■■□□□ 1.12
CUEDC1-201ENST00000360238 RAB29O14966 203 aa22.02■■□□□ 1.12
CUEDC1-201ENST00000360238 ARG1P05089 322 aa22.02■■□□□ 1.12
CUEDC1-201ENST00000360238 PRDX2P32119 198 aa22.02■■□□□ 1.12
CUEDC1-201ENST00000360238 TMEM41BQ5BJD5 291 aa22.02■■□□□ 1.12
CUEDC1-201ENST00000360238 ZNF429Q86V71 674 aa22.02■■□□□ 1.12
CUEDC1-201ENST00000360238 TPRX1Q8N7U7 411 aa22.02■■□□□ 1.12
CUEDC1-201ENST00000360238 FAM216AQ8WUB2 273 aa22.02■■□□□ 1.12
CUEDC1-201ENST00000360238 TAF15Q92804 592 aaKnown RBP eCLIP22.02■■□□□ 1.12
CUEDC1-201ENST00000360238 DIDO1Q9BTC0 2240 aaKnown RBP22.02■■□□□ 1.11
CUEDC1-201ENST00000360238 A0A087WWC5 75 aa22.01■■□□□ 1.11
CUEDC1-201ENST00000360238 ZNF737O75373 536 aa22.01■■□□□ 1.11
CUEDC1-201ENST00000360238 EIF2S3LQ2VIR3 472 aaKnown RBP22.01■■□□□ 1.11
CUEDC1-201ENST00000360238 BTNL3Q6UXE8 466 aa22.01■■□□□ 1.11
CUEDC1-201ENST00000360238 RAB39BQ96DA2 213 aa22.01■■□□□ 1.11
CUEDC1-201ENST00000360238 VSIRQ9H7M9 311 aa22.01■■□□□ 1.11
CUEDC1-201ENST00000360238 CISD1Q9NZ45 108 aaKnown RBP22.01■■□□□ 1.11
CUEDC1-201ENST00000360238 CACNA1DQ01668 2161 aa22.01■■□□□ 1.11
CUEDC1-201ENST00000360238 CFHR2P36980 270 aa22.01■■□□□ 1.11
CUEDC1-201ENST00000360238 ZNF726P1Q15940 193 aa22.01■■□□□ 1.11
CUEDC1-201ENST00000360238 FAM24BQ8N5W8 94 aa22.01■■□□□ 1.11
CUEDC1-201ENST00000360238 RCC1LQ96I51 464 aaKnown RBP22.01■■□□□ 1.11
CUEDC1-201ENST00000360238 YPEL4Q96NS1 127 aa22.01■■□□□ 1.11
CUEDC1-201ENST00000360238 NIPSNAP3BQ9BS92 247 aa22.01■■□□□ 1.11
CUEDC1-201ENST00000360238 LOC400499M0QZD8 3231 aa22.01■■□□□ 1.11
CUEDC1-201ENST00000360238 UBE2L5PA0A1B0GUS4 154 aa22■■□□□ 1.11
CUEDC1-201ENST00000360238 OR2C1O95371 312 aa22■■□□□ 1.11
CUEDC1-201ENST00000360238 BCL2P10415 239 aa22■■□□□ 1.11
CUEDC1-201ENST00000360238 ATP6V1FQ16864 119 aa22■■□□□ 1.11
CUEDC1-201ENST00000360238 GNG13Q9P2W3 67 aa22■■□□□ 1.11
CUEDC1-201ENST00000360238 WASF3Q9UPY6 502 aa22■■□□□ 1.11
CUEDC1-201ENST00000360238 EGR1P18146 543 aa21.99■■□□□ 1.11
CUEDC1-201ENST00000360238 NUBP1P53384 320 aa21.99■■□□□ 1.11
CUEDC1-201ENST00000360238 CEBPGP53567 150 aa21.99■■□□□ 1.11
CUEDC1-201ENST00000360238 TIMM23BQ5SRD1 257 aa21.99■■□□□ 1.11
CUEDC1-201ENST00000360238 SLC35E3Q7Z769 313 aa21.99■■□□□ 1.11
CUEDC1-201ENST00000360238 EDARADDQ8WWZ3 215 aa21.99■■□□□ 1.11
CUEDC1-201ENST00000360238 AGMATQ9BSE5 352 aa21.99■■□□□ 1.11
CUEDC1-201ENST00000360238 IGHV3-43A0A0B4J1X8 118 aa21.99■■□□□ 1.11
CUEDC1-201ENST00000360238 hCG_1809904A0A1W2PP81 198 aa21.99■■□□□ 1.11
CUEDC1-201ENST00000360238 A0A1W2PR64 198 aa21.99■■□□□ 1.11
CUEDC1-201ENST00000360238 A0A1W2PRV1 198 aa21.99■■□□□ 1.11
CUEDC1-201ENST00000360238 IGHV3-43DP0DP04 118 aa21.99■■□□□ 1.11
CUEDC1-201ENST00000360238 C3orf36Q3SXR2 165 aa21.99■■□□□ 1.11
CUEDC1-201ENST00000360238 Q3ZCU0 254 aa21.99■■□□□ 1.11
CUEDC1-201ENST00000360238 CENPVQ7Z7K6 275 aaPredicted RBP21.99■■□□□ 1.11
CUEDC1-201ENST00000360238 TVP23CQ96ET8 276 aa21.99■■□□□ 1.11
CUEDC1-201ENST00000360238 CIB3Q96Q77 187 aaPredicted RBP21.99■■□□□ 1.11
CUEDC1-201ENST00000360238 MRPL37Q9BZE1 423 aaKnown RBP21.99■■□□□ 1.11
CUEDC1-201ENST00000360238 PSG11Q9UQ72 335 aa21.99■■□□□ 1.11
CUEDC1-201ENST00000360238 EP300Q09472 2414 aaPredicted RBP21.99■■□□□ 1.11
CUEDC1-201ENST00000360238 FBP1P09467 338 aa21.98■■□□□ 1.11
CUEDC1-201ENST00000360238 OR8G2PQ6IF36 304 aa21.98■■□□□ 1.11
CUEDC1-201ENST00000360238 H2BFWTQ7Z2G1 175 aa21.98■■□□□ 1.11
CUEDC1-201ENST00000360238 IGKV1D-17A0A075B6S4 117 aa21.98■■□□□ 1.11
CUEDC1-201ENST00000360238 LINC00473A8K010 186 aa21.98■■□□□ 1.11
CUEDC1-201ENST00000360238 ST8SIA5O15466 376 aa21.98■■□□□ 1.11
CUEDC1-201ENST00000360238 IGHV3-13P01766 116 aa21.98■■□□□ 1.11
CUEDC1-201ENST00000360238 EDDM3AQ14507 147 aa21.98■■□□□ 1.11
CUEDC1-201ENST00000360238 MSMPQ1L6U9 139 aa21.98■■□□□ 1.11
CUEDC1-201ENST00000360238 RFESDQ8TAC1 157 aa21.98■■□□□ 1.11
CUEDC1-201ENST00000360238 PPP1R35Q8TAP8 253 aa21.98■■□□□ 1.11
CUEDC1-201ENST00000360238 MUCL1Q96DR8 90 aa21.98■■□□□ 1.11
CUEDC1-201ENST00000360238 ZNF665Q9H7R5 613 aa21.98■■□□□ 1.11
CUEDC1-201ENST00000360238 ZNF98A6NK75 572 aa21.97■■□□□ 1.11
CUEDC1-201ENST00000360238 GZMHP20718 246 aa21.97■■□□□ 1.11
CUEDC1-201ENST00000360238 TAGLN2P37802 199 aaKnown RBP21.97■■□□□ 1.11
CUEDC1-201ENST00000360238 ZNF83P51522 516 aa21.97■■□□□ 1.11
CUEDC1-201ENST00000360238 LCN15Q6UWW0 184 aa21.97■■□□□ 1.11
CUEDC1-201ENST00000360238 SSX7Q7RTT5 188 aa21.97■■□□□ 1.11
CUEDC1-201ENST00000360238 DTD1Q8TEA8 209 aa21.97■■□□□ 1.11
CUEDC1-201ENST00000360238 TMEM147Q9BVK8 224 aa21.97■■□□□ 1.11
CUEDC1-201ENST00000360238 CLN8Q9UBY8 286 aa21.97■■□□□ 1.11
CUEDC1-201ENST00000360238 JPT1Q9UK76 154 aa21.97■■□□□ 1.11
CUEDC1-201ENST00000360238 DLK1P80370 383 aa21.97■■□□□ 1.11
CUEDC1-201ENST00000360238 SNX22Q96L94 193 aa21.97■■□□□ 1.11
CUEDC1-201ENST00000360238 DUSP13Q9UII6 198 aa21.97■■□□□ 1.11
CUEDC1-201ENST00000360238 C5orf52A6NGY3 159 aa21.96■■□□□ 1.11
CUEDC1-201ENST00000360238 MGST3O14880 152 aa21.96■■□□□ 1.11
CUEDC1-201ENST00000360238 PMS2P11Q13670 270 aa21.96■■□□□ 1.11
CUEDC1-201ENST00000360238 CR1LQ2VPA4 569 aa21.96■■□□□ 1.11
CUEDC1-201ENST00000360238 LRP11Q86VZ4 500 aa21.96■■□□□ 1.11
CUEDC1-201ENST00000360238 S100PBPQ96BU1 408 aa21.96■■□□□ 1.11
CUEDC1-201ENST00000360238 P2RX4Q99571 388 aa21.96■■□□□ 1.11
CUEDC1-201ENST00000360238 DCTN5Q9BTE1 182 aa21.96■■□□□ 1.11
CUEDC1-201ENST00000360238 FAM215AQ9Y5M1 114 aa21.96■■□□□ 1.11
CUEDC1-201ENST00000360238 ZFP92A6NM28 416 aa21.95■■□□□ 1.1
CUEDC1-201ENST00000360238 PMS2P5A8MQ11 134 aa21.95■■□□□ 1.1
CUEDC1-201ENST00000360238 S100A6P06703 90 aa21.95■■□□□ 1.1
CUEDC1-201ENST00000360238 SNRPEP62304 92 aaKnown RBP21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms