RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 SURF2Q15527 256 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-202ENST00000359366 ARSJQ5FYB0 599 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-202ENST00000359366 AKR1C8PQ5T2L2 129 aa4.28□□□□□ -1.72
ATXN3-202ENST00000359366 DUX4L9Q6RFH8 374 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-202ENST00000359366 WDR82Q6UXN9 313 aa4.28□□□□□ -1.72
ATXN3-202ENST00000359366 THNSL2Q86YJ6 484 aa4.28□□□□□ -1.72
ATXN3-202ENST00000359366 FOXRED2Q8IWF2 684 aa4.28□□□□□ -1.72
ATXN3-202ENST00000359366 ZNF295-AS1Q8N0V1 137 aa4.28□□□□□ -1.72
ATXN3-202ENST00000359366 SPICQ8N5J4 248 aa4.28□□□□□ -1.72
ATXN3-202ENST00000359366 MRPL30Q8TCC3 161 aaKnown RBP4.28□□□□□ -1.72
ATXN3-202ENST00000359366 RNASE8Q8TDE3 154 aaKnown RBP4.28□□□□□ -1.72
ATXN3-202ENST00000359366 TMEM171Q8WVE6 324 aa4.28□□□□□ -1.72
ATXN3-202ENST00000359366 SECTM1Q8WVN6 248 aa4.28□□□□□ -1.72
ATXN3-202ENST00000359366 KIRREL1Q96J84 757 aa4.28□□□□□ -1.72
ATXN3-202ENST00000359366 SMIM8Q96KF7 97 aa4.28□□□□□ -1.72
ATXN3-202ENST00000359366 NRIP2Q9BQI9 281 aa4.28□□□□□ -1.72
ATXN3-202ENST00000359366 KRTAP17-1Q9BYP8 105 aa4.28□□□□□ -1.72
ATXN3-202ENST00000359366 ZFAND3Q9H8U3 227 aa4.28□□□□□ -1.72
ATXN3-202ENST00000359366 ZNF286AQ9HBT8 521 aa4.28□□□□□ -1.72
ATXN3-202ENST00000359366 NECAP2Q9NVZ3 263 aa4.28□□□□□ -1.72
ATXN3-202ENST00000359366 OR1A1Q9P1Q5 309 aa4.28□□□□□ -1.72
ATXN3-202ENST00000359366 AMDHD2Q9Y303 409 aa4.28□□□□□ -1.72
ATXN3-202ENST00000359366 TMED3Q9Y3Q3 217 aa4.28□□□□□ -1.72
ATXN3-202ENST00000359366 DYSFO75923 2080 aa4.28□□□□□ -1.72
ATXN3-202ENST00000359366 CELSR1Q9NYQ6 3014 aa4.28□□□□□ -1.72
ATXN3-202ENST00000359366 ZNF462Q96JM2 2506 aa4.28□□□□□ -1.73
ATXN3-202ENST00000359366 FAM208BQ5VWN6 2430 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 DPRXA6NFQ7 191 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 NKX6-3A6NJ46 265 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 C16orf97H3BN30 126 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 DVL1O14640 695 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 HSD17B6O14756 317 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 OR2A4O95047 310 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 IGHV3-13P01766 116 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 IGHV3-7P01780 117 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 MAS1LP35410 378 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 OR3A1P47881 315 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 FGF8P55075 233 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-202ENST00000359366 PIGPP57054 158 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 SELENOTP62341 195 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 RPL19P84098 196 aaKnown RBP4.27□□□□□ -1.73
ATXN3-202ENST00000359366 AESQ08117 197 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 LTC4SQ16873 150 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 NCMAPQ5T1S8 102 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 UNQ6494/PRO21346Q6UXR6 183 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 MOGAT3Q86VF5 341 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 SAXO1Q8IYX7 474 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 ZDHHC22Q8N966 263 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 DEFB108BQ8NET1 73 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 OR8U1Q8NH10 309 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 LINC01560Q8TB33 94 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 LRRC29Q8WV35 223 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 ITLN1Q8WWA0 313 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 ZNF479Q96JC4 524 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 OR2V2Q96R30 315 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 OR2A7Q96R45 310 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 VPS25Q9BRG1 176 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 SUCNR1Q9BXA5 334 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 Q9N2K0 584 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 TAAR3PQ9P1P4 343 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 RCC2Q9P258 522 aaKnown RBP4.27□□□□□ -1.73
ATXN3-202ENST00000359366 ZNF835Q9Y2P0 537 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 LRRK2Q5S007 2527 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 DOCK11Q5JSL3 2073 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 RAI1Q7Z5J4 1906 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-202ENST00000359366 C22orf46C9J442 243 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 CCL21O00585 134 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 HAND1O96004 215 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 NAPSAO96009 420 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 CYB5R3P00387 301 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-202ENST00000359366 ZNF728P0DKX0 622 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 KITLGP21583 273 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 FPR2P25090 351 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 ERVK11-1P61568 191 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 NKX6-1P78426 367 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-202ENST00000359366 CCL8P80075 99 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 EDDM3AQ14507 147 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 PSG3Q16557 428 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 BSXQ3C1V8 233 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 TMEM128Q5BJH2 165 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 SPIN3Q5JUX0 258 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 ALKAL2Q6UX46 152 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 FGFRL1Q8N441 504 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 OR5M8Q8NGP6 311 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 RFESDQ8TAC1 157 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 PPP1R1CQ8WVI7 109 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 RND1Q92730 232 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 HIST1H2BAQ96A08 127 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 OR10C1Q96KK4 312 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 SNHG12Q9BXW3 62 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 PKIBQ9C010 78 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 ACTR3CQ9C0K3 210 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-202ENST00000359366 CXXC4Q9H2H0 198 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 SMPXQ9UHP9 88 aa4.27□□□□□ -1.73
ATXN3-202ENST00000359366 C14orf166Q9Y224 244 aaKnown RBP4.27□□□□□ -1.73
ATXN3-202ENST00000359366 IGHV3-43A0A0B4J1X8 118 aa4.26□□□□□ -1.73
ATXN3-202ENST00000359366 TCF21O43680 179 aa4.26□□□□□ -1.73
ATXN3-202ENST00000359366 NXPH3O95157 252 aa4.26□□□□□ -1.73
ATXN3-202ENST00000359366 SFT2D2O95562 160 aa4.26□□□□□ -1.73
ATXN3-202ENST00000359366 DUS4LO95620 317 aaKnown RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms