RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 ID3Q02535 119 aa9.45□□□□□ -0.9
SSU72-202ENST00000359060 P2RY6Q15077 328 aa9.45□□□□□ -0.9
SSU72-202ENST00000359060 FAM201AQ5SY85 155 aa9.45□□□□□ -0.9
SSU72-202ENST00000359060 RPRMQ9NS64 109 aa9.45□□□□□ -0.9
SSU72-202ENST00000359060 CFAP54Q96N23 3096 aa9.45□□□□□ -0.9
SSU72-202ENST00000359060 ZNF737O75373 536 aa9.45□□□□□ -0.9
SSU72-202ENST00000359060 SLC25A6P12236 298 aa9.45□□□□□ -0.9
SSU72-202ENST00000359060 MMP9P14780 707 aa9.45□□□□□ -0.9
SSU72-202ENST00000359060 ZNRF1Q8ND25 227 aa9.45□□□□□ -0.9
SSU72-202ENST00000359060 OR10G4Q8NGN3 311 aa9.45□□□□□ -0.9
SSU72-202ENST00000359060 OR10G9Q8NGN4 311 aa9.45□□□□□ -0.9
SSU72-202ENST00000359060 OR10G7Q8NGN6 311 aa9.45□□□□□ -0.9
SSU72-202ENST00000359060 ITLN1Q8WWA0 313 aa9.45□□□□□ -0.9
SSU72-202ENST00000359060 CABLES2Q9BTV7 478 aa9.45□□□□□ -0.9
SSU72-202ENST00000359060 RBKSQ9H477 322 aa9.45□□□□□ -0.9
SSU72-202ENST00000359060 A0A0G2JRQ6 117 aa9.44□□□□□ -0.9
SSU72-202ENST00000359060 ACTL6BO94805 426 aa9.44□□□□□ -0.9
SSU72-202ENST00000359060 RAB5AP20339 215 aa9.44□□□□□ -0.9
SSU72-202ENST00000359060 GZMHP20718 246 aa9.44□□□□□ -0.9
SSU72-202ENST00000359060 ZNF645Q8N7E2 425 aa9.44□□□□□ -0.9
SSU72-202ENST00000359060 NANPQ8TBE9 248 aa9.44□□□□□ -0.9
SSU72-202ENST00000359060 TMEM171Q8WVE6 324 aa9.44□□□□□ -0.9
SSU72-202ENST00000359060 FRZBQ92765 325 aa9.44□□□□□ -0.9
SSU72-202ENST00000359060 RAB39BQ96DA2 213 aa9.44□□□□□ -0.9
SSU72-202ENST00000359060 CPAMD8Q8IZJ3 1885 aa9.44□□□□□ -0.9
SSU72-202ENST00000359060 SS18L1O75177 396 aaPredicted RBP9.44□□□□□ -0.9
SSU72-202ENST00000359060 DBX2Q6ZNG2 339 aa9.44□□□□□ -0.9
SSU72-202ENST00000359060 TMEM147Q9BVK8 224 aa9.44□□□□□ -0.9
SSU72-202ENST00000359060 PLEKHA3Q9HB20 300 aa9.44□□□□□ -0.9
SSU72-202ENST00000359060 IQCF6A8MYZ5 107 aa9.44□□□□□ -0.9
SSU72-202ENST00000359060 H7BYZ3 331 aa9.44□□□□□ -0.9
SSU72-202ENST00000359060 ZG16O60844 167 aa9.44□□□□□ -0.9
SSU72-202ENST00000359060 FOXC1Q12948 553 aa9.44□□□□□ -0.9
SSU72-202ENST00000359060 PLA2G2CQ5R387 149 aa9.44□□□□□ -0.9
SSU72-202ENST00000359060 GFRALQ6UXV0 394 aa9.44□□□□□ -0.9
SSU72-202ENST00000359060 ACP7Q6ZNF0 438 aa9.44□□□□□ -0.9
SSU72-202ENST00000359060 ZNF497Q6ZNH5 498 aa9.44□□□□□ -0.9
SSU72-202ENST00000359060 Q6ZSR3 168 aa9.44□□□□□ -0.9
SSU72-202ENST00000359060 CISD2Q8N5K1 135 aaKnown RBP9.44□□□□□ -0.9
SSU72-202ENST00000359060 OR13A1Q8NGR1 328 aa9.44□□□□□ -0.9
SSU72-202ENST00000359060 S100PBPQ96BU1 408 aa9.44□□□□□ -0.9
SSU72-202ENST00000359060 ZDHHC11Q9H8X9 412 aa9.44□□□□□ -0.9
SSU72-202ENST00000359060 LRRC30A6NM36 301 aa9.43□□□□□ -0.9
SSU72-202ENST00000359060 J3QW42 95 aa9.43□□□□□ -0.9
SSU72-202ENST00000359060 SCAF4O95104 1147 aaKnown RBP9.43□□□□□ -0.9
SSU72-202ENST00000359060 KIR2DL2P43627 348 aaPredicted RBP9.43□□□□□ -0.9
SSU72-202ENST00000359060 CCL8P80075 99 aa9.43□□□□□ -0.9
SSU72-202ENST00000359060 TNFRSF9Q07011 255 aa9.43□□□□□ -0.9
SSU72-202ENST00000359060 NMSQ5H8A3 153 aa9.43□□□□□ -0.9
SSU72-202ENST00000359060 C1orf87Q8N0U7 546 aa9.43□□□□□ -0.9
SSU72-202ENST00000359060 LILRB1Q8NHL6 650 aaPredicted RBP9.43□□□□□ -0.9
SSU72-202ENST00000359060 EXPH5Q8NEV8 1989 aa9.43□□□□□ -0.9
SSU72-202ENST00000359060 C17orf98A8MV24 154 aa9.43□□□□□ -0.9
SSU72-202ENST00000359060 CLDN14O95500 239 aa9.43□□□□□ -0.9
SSU72-202ENST00000359060 CD5P06127 495 aa9.43□□□□□ -0.9
SSU72-202ENST00000359060 ACOT6Q3I5F7 207 aaPredicted RBP9.43□□□□□ -0.9
SSU72-202ENST00000359060 ACSF3Q4G176 576 aaPredicted RBP9.43□□□□□ -0.9
SSU72-202ENST00000359060 NCR3LG1Q68D85 454 aa9.43□□□□□ -0.9
SSU72-202ENST00000359060 PCSK4Q6UW60 755 aa9.43□□□□□ -0.9
SSU72-202ENST00000359060 ZBTB34Q8NCN2 500 aa9.43□□□□□ -0.9
SSU72-202ENST00000359060 GTF3AQ92664 365 aaKnown RBP9.43□□□□□ -0.9
SSU72-202ENST00000359060 IGHV2OR16-5A0A0B4J2B6 119 aa9.43□□□□□ -0.9
SSU72-202ENST00000359060 ODAMA1E959 279 aa9.43□□□□□ -0.9
SSU72-202ENST00000359060 NKX6-3A6NJ46 265 aa9.43□□□□□ -0.9
SSU72-202ENST00000359060 ENSAO43768 121 aaKnown RBP9.43□□□□□ -0.9
SSU72-202ENST00000359060 RAMP3O60896 148 aa9.43□□□□□ -0.9
SSU72-202ENST00000359060 PTBP3O95758 552 aaKnown RBP9.43□□□□□ -0.9
SSU72-202ENST00000359060 HOXB1P14653 301 aaPredicted RBP9.43□□□□□ -0.9
SSU72-202ENST00000359060 HNF1AP20823 631 aa9.43□□□□□ -0.9
SSU72-202ENST00000359060 KITLGP21583 273 aa9.43□□□□□ -0.9
SSU72-202ENST00000359060 VKORC1L1Q8N0U8 176 aa9.43□□□□□ -0.9
SSU72-202ENST00000359060 LSM10Q969L4 123 aaKnown RBP9.43□□□□□ -0.9
SSU72-202ENST00000359060 SPRY4Q9C004 299 aa9.43□□□□□ -0.9
SSU72-202ENST00000359060 TMPRSS2O15393 492 aa9.42□□□□□ -0.9
SSU72-202ENST00000359060 MBP02144 154 aa9.42□□□□□ -0.9
SSU72-202ENST00000359060 SLC16A13Q7RTY0 426 aa9.42□□□□□ -0.9
SSU72-202ENST00000359060 CCL17Q92583 94 aa9.42□□□□□ -0.9
SSU72-202ENST00000359060 TAF15Q92804 592 aaKnown RBP eCLIP9.42□□□□□ -0.9
SSU72-202ENST00000359060 HIST1H2BAQ96A08 127 aa9.42□□□□□ -0.9
SSU72-202ENST00000359060 HSD17B10Q99714 261 aaKnown RBP9.42□□□□□ -0.9
SSU72-202ENST00000359060 K7N7A8 449 aa9.42□□□□□ -0.9
SSU72-202ENST00000359060 AQP7O14520 342 aa9.42□□□□□ -0.9
SSU72-202ENST00000359060 GALR2O43603 387 aaPredicted RBP9.42□□□□□ -0.9
SSU72-202ENST00000359060 ADH4P08319 380 aa9.42□□□□□ -0.9
SSU72-202ENST00000359060 NCMAPQ5T1S8 102 aa9.42□□□□□ -0.9
SSU72-202ENST00000359060 FAM53AQ6NSI3 398 aaPredicted RBP9.42□□□□□ -0.9
SSU72-202ENST00000359060 Q6P435 159 aa9.42□□□□□ -0.9
SSU72-202ENST00000359060 Q6ZRM9 215 aa9.42□□□□□ -0.9
SSU72-202ENST00000359060 ZDHHC16Q969W1 377 aa9.42□□□□□ -0.9
SSU72-202ENST00000359060 OR6C3Q9NZP0 311 aa9.42□□□□□ -0.9
SSU72-202ENST00000359060 ZDHHC8Q9ULC8 765 aa9.42□□□□□ -0.9
SSU72-202ENST00000359060 WNK2Q9Y3S1 2297 aa9.42□□□□□ -0.9
SSU72-202ENST00000359060 TMEM50AO95807 157 aa9.42□□□□□ -0.9
SSU72-202ENST00000359060 HFEQ30201 348 aa9.42□□□□□ -0.9
SSU72-202ENST00000359060 PFDN5Q99471 154 aa9.42□□□□□ -0.9
SSU72-202ENST00000359060 MGST3O14880 152 aa9.42□□□□□ -0.9
SSU72-202ENST00000359060 CASP6P55212 293 aa9.42□□□□□ -0.9
SSU72-202ENST00000359060 LINC00205P59089 165 aa9.42□□□□□ -0.9
SSU72-202ENST00000359060 MRPS11P82912 194 aaKnown RBP9.42□□□□□ -0.9
SSU72-202ENST00000359060 KHDC3LQ587J8 217 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms