RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 HOXA5P20719 270 aa7.21□□□□□ -1.26
RFX3-202ENST00000358730 TLE1Q04724 770 aa7.21□□□□□ -1.26
RFX3-202ENST00000358730 PRAMEF6Q5VXH4 476 aa7.21□□□□□ -1.26
RFX3-202ENST00000358730 INO80CQ6PI98 192 aaPredicted RBP7.21□□□□□ -1.26
RFX3-202ENST00000358730 Q6ZT83 130 aa7.21□□□□□ -1.26
RFX3-202ENST00000358730 FAM214BQ7L5A3 538 aa7.21□□□□□ -1.26
RFX3-202ENST00000358730 ZBTB34Q8NCN2 500 aa7.21□□□□□ -1.26
RFX3-202ENST00000358730 OR51M1Q9H341 326 aa7.21□□□□□ -1.26
RFX3-202ENST00000358730 SLC25A22Q9H936 323 aa7.21□□□□□ -1.26
RFX3-202ENST00000358730 SLC39A9Q9NUM3 307 aa7.21□□□□□ -1.26
RFX3-202ENST00000358730 UFSP2Q9NUQ7 469 aa7.21□□□□□ -1.26
RFX3-202ENST00000358730 FZR1Q9UM11 496 aa7.21□□□□□ -1.26
RFX3-202ENST00000358730 PCNX2A6NKB5 2137 aa7.21□□□□□ -1.26
RFX3-202ENST00000358730 LRRC30A6NM36 301 aa7.2□□□□□ -1.26
RFX3-202ENST00000358730 C17orf98A8MV24 154 aa7.2□□□□□ -1.26
RFX3-202ENST00000358730 CLDN34H7C241 214 aa7.2□□□□□ -1.26
RFX3-202ENST00000358730 HIST1H2BKO60814 126 aa7.2□□□□□ -1.26
RFX3-202ENST00000358730 ZNF737O75373 536 aa7.2□□□□□ -1.26
RFX3-202ENST00000358730 RBMXL2O75526 392 aaKnown RBP7.2□□□□□ -1.26
RFX3-202ENST00000358730 HIST1H2BJP06899 126 aa7.2□□□□□ -1.26
RFX3-202ENST00000358730 CD55P08174 381 aa7.2□□□□□ -1.26
RFX3-202ENST00000358730 HIST1H2BOP23527 126 aa7.2□□□□□ -1.26
RFX3-202ENST00000358730 HIST1H2BBP33778 126 aa7.2□□□□□ -1.26
RFX3-202ENST00000358730 SSTR5P35346 364 aa7.2□□□□□ -1.26
RFX3-202ENST00000358730 CDX1P47902 265 aaPredicted RBP7.2□□□□□ -1.26
RFX3-202ENST00000358730 TNFSF10P50591 281 aa7.2□□□□□ -1.26
RFX3-202ENST00000358730 SOX8P57073 446 aa7.2□□□□□ -1.26
RFX3-202ENST00000358730 HIST1H2BDP58876 126 aa7.2□□□□□ -1.26
RFX3-202ENST00000358730 HIST1H2BCP62807 126 aa7.2□□□□□ -1.26
RFX3-202ENST00000358730 HIST2H2BEQ16778 126 aa7.2□□□□□ -1.26
RFX3-202ENST00000358730 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.2□□□□□ -1.26
RFX3-202ENST00000358730 SLC35E4Q6ICL7 350 aa7.2□□□□□ -1.26
RFX3-202ENST00000358730 ACSM6Q6P461 480 aa7.2□□□□□ -1.26
RFX3-202ENST00000358730 RPP25LQ8N5L8 163 aaKnown RBP7.2□□□□□ -1.26
RFX3-202ENST00000358730 TPRX1Q8N7U7 411 aa7.2□□□□□ -1.26
RFX3-202ENST00000358730 HIST1H2BHQ93079 126 aa7.2□□□□□ -1.26
RFX3-202ENST00000358730 ZDHHC16Q969W1 377 aa7.2□□□□□ -1.26
RFX3-202ENST00000358730 COQ2Q96H96 371 aa7.2□□□□□ -1.26
RFX3-202ENST00000358730 FAM210BQ96KR6 192 aa7.2□□□□□ -1.26
RFX3-202ENST00000358730 HIST1H2BNQ99877 126 aa7.2□□□□□ -1.26
RFX3-202ENST00000358730 HIST1H2BMQ99879 126 aa7.2□□□□□ -1.26
RFX3-202ENST00000358730 SDF2L1Q9HCN8 221 aa7.2□□□□□ -1.26
RFX3-202ENST00000358730 BDP1A6H8Y1 2624 aa7.2□□□□□ -1.26
RFX3-202ENST00000358730 IFITM10A6NMD0 228 aa7.2□□□□□ -1.26
RFX3-202ENST00000358730 TIMM8AO60220 97 aaPredicted RBP7.2□□□□□ -1.26
RFX3-202ENST00000358730 ZG16O60844 167 aa7.2□□□□□ -1.26
RFX3-202ENST00000358730 P0C879 139 aa7.2□□□□□ -1.26
RFX3-202ENST00000358730 FGF7P21781 194 aa7.2□□□□□ -1.26
RFX3-202ENST00000358730 S100A2P29034 98 aa7.2□□□□□ -1.26
RFX3-202ENST00000358730 PLA2G5P39877 138 aa7.2□□□□□ -1.26
RFX3-202ENST00000358730 RPS16P62249 146 aaKnown RBP7.2□□□□□ -1.26
RFX3-202ENST00000358730 NKX6-1P78426 367 aaPredicted RBP7.2□□□□□ -1.26
RFX3-202ENST00000358730 SPNS3Q6ZMD2 512 aa7.2□□□□□ -1.26
RFX3-202ENST00000358730 ACP7Q6ZNF0 438 aa7.2□□□□□ -1.26
RFX3-202ENST00000358730 Q6ZR03 302 aa7.2□□□□□ -1.26
RFX3-202ENST00000358730 SMIM7Q9BQ49 75 aa7.2□□□□□ -1.26
RFX3-202ENST00000358730 TMEM147Q9BVK8 224 aa7.2□□□□□ -1.26
RFX3-202ENST00000358730 GGACTQ9BVM4 153 aa7.2□□□□□ -1.26
RFX3-202ENST00000358730 CXXC4Q9H2H0 198 aa7.2□□□□□ -1.26
RFX3-202ENST00000358730 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.2□□□□□ -1.26
RFX3-202ENST00000358730 TIMM9Q9Y5J7 89 aa7.2□□□□□ -1.26
RFX3-202ENST00000358730 CACNA1GO43497 2377 aa7.2□□□□□ -1.26
RFX3-202ENST00000358730 IGHV3-43A0A0B4J1X8 118 aa7.2□□□□□ -1.26
RFX3-202ENST00000358730 M0R296 226 aa7.2□□□□□ -1.26
RFX3-202ENST00000358730 PTBP3O95758 552 aaKnown RBP7.2□□□□□ -1.26
RFX3-202ENST00000358730 IGHV3-43DP0DP04 118 aa7.2□□□□□ -1.26
RFX3-202ENST00000358730 S100PP25815 95 aa7.2□□□□□ -1.26
RFX3-202ENST00000358730 MEF2BQ02080 365 aaPredicted RBP7.2□□□□□ -1.26
RFX3-202ENST00000358730 EIF4EBP1Q13541 118 aaPredicted RBP7.2□□□□□ -1.26
RFX3-202ENST00000358730 SPINK9Q5DT21 86 aa7.2□□□□□ -1.26
RFX3-202ENST00000358730 WDR82Q6UXN9 313 aa7.2□□□□□ -1.26
RFX3-202ENST00000358730 C11orf53Q8IXP5 236 aa7.2□□□□□ -1.26
RFX3-202ENST00000358730 OR13D1Q8NGV5 346 aa7.2□□□□□ -1.26
RFX3-202ENST00000358730 DTD1Q8TEA8 209 aa7.2□□□□□ -1.26
RFX3-202ENST00000358730 SSX3Q99909 188 aa7.2□□□□□ -1.26
RFX3-202ENST00000358730 MSL2Q9HCI7 577 aa7.2□□□□□ -1.26
RFX3-202ENST00000358730 OR5H1A6NKK0 313 aa7.19□□□□□ -1.26
RFX3-202ENST00000358730 IGKV3-15P01624 115 aa7.19□□□□□ -1.26
RFX3-202ENST00000358730 RND2P52198 227 aa7.19□□□□□ -1.26
RFX3-202ENST00000358730 CD81P60033 236 aa7.19□□□□□ -1.26
RFX3-202ENST00000358730 COL10A1Q03692 680 aa7.19□□□□□ -1.26
RFX3-202ENST00000358730 TFF3Q07654 80 aa7.19□□□□□ -1.26
RFX3-202ENST00000358730 ADIRFQ15847 76 aa7.19□□□□□ -1.26
RFX3-202ENST00000358730 Q3ZCU0 254 aa7.19□□□□□ -1.26
RFX3-202ENST00000358730 WDR25Q64LD2 544 aaPredicted RBP7.19□□□□□ -1.26
RFX3-202ENST00000358730 VWA1Q6PCB0 445 aa7.19□□□□□ -1.26
RFX3-202ENST00000358730 H2BFWTQ7Z2G1 175 aa7.19□□□□□ -1.26
RFX3-202ENST00000358730 OR10P1Q8NGE3 313 aa7.19□□□□□ -1.26
RFX3-202ENST00000358730 LOXL4Q96JB6 756 aa7.19□□□□□ -1.26
RFX3-202ENST00000358730 TMEM242Q9NWH2 141 aa7.19□□□□□ -1.26
RFX3-202ENST00000358730 GAR1Q9NY12 217 aaKnown RBP7.19□□□□□ -1.26
RFX3-202ENST00000358730 METRNQ9UJH8 293 aa7.19□□□□□ -1.26
RFX3-202ENST00000358730 DSPP15924 2871 aaKnown RBP7.19□□□□□ -1.26
RFX3-202ENST00000358730 C1QTNF9BB2RNN3 333 aa7.19□□□□□ -1.26
RFX3-202ENST00000358730 ST8SIA5O15466 376 aa7.19□□□□□ -1.26
RFX3-202ENST00000358730 CLDN14O95500 239 aa7.19□□□□□ -1.26
RFX3-202ENST00000358730 FABP6P51161 128 aa7.19□□□□□ -1.26
RFX3-202ENST00000358730 BRWD1-AS2P59051 145 aa7.19□□□□□ -1.26
RFX3-202ENST00000358730 SMIM21Q3B7S5 101 aa7.19□□□□□ -1.26
RFX3-202ENST00000358730 PDZD11Q5EBL8 140 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms