RNA–Protein interactions for RNA: ENST00000358170.6

CD46-205, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,371 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-205ENST00000358170 RBKSQ9H477 322 aa6.96□□□□□ -1.3
CD46-205ENST00000358170 MIOXQ9UGB7 285 aa6.96□□□□□ -1.3
CD46-205ENST00000358170 SPTBN1Q01082 2364 aaKnown RBP6.96□□□□□ -1.3
CD46-205ENST00000358170 AP4M1O00189 453 aa6.95□□□□□ -1.3
CD46-205ENST00000358170 CLN5O75503 358 aa6.95□□□□□ -1.3
CD46-205ENST00000358170 PTBP3O95758 552 aaKnown RBP6.95□□□□□ -1.3
CD46-205ENST00000358170 HBE1P02100 147 aa6.95□□□□□ -1.3
CD46-205ENST00000358170 COL8A2P25067 703 aa6.95□□□□□ -1.3
CD46-205ENST00000358170 ZNF83P51522 516 aa6.95□□□□□ -1.3
CD46-205ENST00000358170 ZNF497Q6ZNH5 498 aa6.95□□□□□ -1.3
CD46-205ENST00000358170 Q6ZR03 302 aa6.95□□□□□ -1.3
CD46-205ENST00000358170 H2BFWTQ7Z2G1 175 aa6.95□□□□□ -1.3
CD46-205ENST00000358170 ZNF525Q8N782 197 aa6.95□□□□□ -1.3
CD46-205ENST00000358170 C11orf1Q9H5F2 150 aa6.95□□□□□ -1.3
CD46-205ENST00000358170 IFT22Q9H7X7 185 aa6.95□□□□□ -1.3
CD46-205ENST00000358170 ATPIF1Q9UII2 106 aa6.95□□□□□ -1.3
CD46-205ENST00000358170 TMEM30CPA0ZSE6 113 aa6.95□□□□□ -1.3
CD46-205ENST00000358170 MLNRO43193 412 aa6.95□□□□□ -1.3
CD46-205ENST00000358170 FCGR3BO75015 233 aa6.95□□□□□ -1.3
CD46-205ENST00000358170 OPN1MWP04001 364 aa6.95□□□□□ -1.3
CD46-205ENST00000358170 FABP1P07148 127 aa6.95□□□□□ -1.3
CD46-205ENST00000358170 OPN1MW2P0DN77 364 aa6.95□□□□□ -1.3
CD46-205ENST00000358170 OPN1MW3P0DN78 364 aa6.95□□□□□ -1.3
CD46-205ENST00000358170 HNF1AP20823 631 aa6.95□□□□□ -1.3
CD46-205ENST00000358170 AGAP20933 346 aa6.95□□□□□ -1.3
CD46-205ENST00000358170 MDH2P40926 338 aaKnown RBP6.95□□□□□ -1.3
CD46-205ENST00000358170 COL10A1Q03692 680 aa6.95□□□□□ -1.3
CD46-205ENST00000358170 ZNF726P1Q15940 193 aa6.95□□□□□ -1.3
CD46-205ENST00000358170 OR13A1Q8NGR1 328 aa6.95□□□□□ -1.3
CD46-205ENST00000358170 LRRC29Q8WV35 223 aa6.95□□□□□ -1.3
CD46-205ENST00000358170 PKIBQ9C010 78 aa6.95□□□□□ -1.3
CD46-205ENST00000358170 SH3BGRL2Q9UJC5 107 aa6.95□□□□□ -1.3
CD46-205ENST00000358170 TNRC6AQ8NDV7 1962 aaKnown RBP6.95□□□□□ -1.3
CD46-205ENST00000358170 A0A0U1RQK1 487 aa6.95□□□□□ -1.3
CD46-205ENST00000358170 ZNF737O75373 536 aa6.95□□□□□ -1.3
CD46-205ENST00000358170 CRYAAP02489 173 aa6.95□□□□□ -1.3
CD46-205ENST00000358170 FGF7P21781 194 aa6.95□□□□□ -1.3
CD46-205ENST00000358170 RTP5Q14D33 572 aa6.95□□□□□ -1.3
CD46-205ENST00000358170 SPNS3Q6ZMD2 512 aa6.95□□□□□ -1.3
CD46-205ENST00000358170 FAM214BQ7L5A3 538 aa6.95□□□□□ -1.3
CD46-205ENST00000358170 ZNF610Q8N9Z0 462 aa6.95□□□□□ -1.3
CD46-205ENST00000358170 C9orf106Q8NAJ2 232 aa6.95□□□□□ -1.3
CD46-205ENST00000358170 OR4F5Q8NH21 305 aa6.95□□□□□ -1.3
CD46-205ENST00000358170 MUCL1Q96DR8 90 aa6.95□□□□□ -1.3
CD46-205ENST00000358170 OR4F4Q96R69 305 aa6.95□□□□□ -1.3
CD46-205ENST00000358170 SMIM7Q9BQ49 75 aa6.95□□□□□ -1.3
CD46-205ENST00000358170 DOK5Q9P104 306 aa6.95□□□□□ -1.3
CD46-205ENST00000358170 TLN1Q9Y490 2541 aaKnown RBP6.95□□□□□ -1.3
CD46-205ENST00000358170 CACNA1BQ00975 2339 aa6.94□□□□□ -1.3
CD46-205ENST00000358170 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.94□□□□□ -1.3
CD46-205ENST00000358170 ODAMA1E959 279 aa6.94□□□□□ -1.3
CD46-205ENST00000358170 SPRY3O43610 288 aa6.94□□□□□ -1.3
CD46-205ENST00000358170 IFNA10P01566 189 aa6.94□□□□□ -1.3
CD46-205ENST00000358170 PGA5P0DJD9 388 aa6.94□□□□□ -1.3
CD46-205ENST00000358170 WT1P19544 449 aaPredicted RBP6.94□□□□□ -1.3
CD46-205ENST00000358170 S100A2P29034 98 aa6.94□□□□□ -1.3
CD46-205ENST00000358170 TNFSF10P50591 281 aa6.94□□□□□ -1.3
CD46-205ENST00000358170 TFF3Q07654 80 aa6.94□□□□□ -1.3
CD46-205ENST00000358170 GCSAMLQ5JQS6 135 aa6.94□□□□□ -1.3
CD46-205ENST00000358170 CST9LP1Q5W188 147 aa6.94□□□□□ -1.3
CD46-205ENST00000358170 LRP11Q86VZ4 500 aa6.94□□□□□ -1.3
CD46-205ENST00000358170 ZNF709Q8N972 641 aa6.94□□□□□ -1.3
CD46-205ENST00000358170 ZNRF1Q8ND25 227 aa6.94□□□□□ -1.3
CD46-205ENST00000358170 OR10D4PQ8NGN7 298 aa6.94□□□□□ -1.3
CD46-205ENST00000358170 CABLES2Q9BTV7 478 aa6.94□□□□□ -1.3
CD46-205ENST00000358170 GPR61Q9BZJ8 451 aa6.94□□□□□ -1.3
CD46-205ENST00000358170 OPA3Q9H6K4 179 aa6.94□□□□□ -1.3
CD46-205ENST00000358170 GAB2Q9UQC2 676 aa6.94□□□□□ -1.3
CD46-205ENST00000358170 COL6A6A6NMZ7 2263 aa6.94□□□□□ -1.3
CD46-205ENST00000358170 SPENQ96T58 3664 aaKnown RBP6.94□□□□□ -1.3
CD46-205ENST00000358170 BCL2P10415 239 aa6.94□□□□□ -1.3
CD46-205ENST00000358170 SELLP14151 372 aa6.94□□□□□ -1.3
CD46-205ENST00000358170 S100PP25815 95 aa6.94□□□□□ -1.3
CD46-205ENST00000358170 TNFRSF9Q07011 255 aa6.94□□□□□ -1.3
CD46-205ENST00000358170 RNF212Q495C1 297 aa6.94□□□□□ -1.3
CD46-205ENST00000358170 C9orf152Q5JTZ5 239 aa6.94□□□□□ -1.3
CD46-205ENST00000358170 FFAR4Q5NUL3 377 aa6.94□□□□□ -1.3
CD46-205ENST00000358170 TAF15Q92804 592 aaKnown RBP eCLIP6.94□□□□□ -1.3
CD46-205ENST00000358170 GMPPAQ96IJ6 420 aaPredicted RBP6.94□□□□□ -1.3
CD46-205ENST00000358170 KLF2Q9Y5W3 355 aaPredicted RBP6.94□□□□□ -1.3
CD46-205ENST00000358170 IGKV1D-33P01593 117 aa6.94□□□□□ -1.3
CD46-205ENST00000358170 IGKV1-33P01594 117 aa6.94□□□□□ -1.3
CD46-205ENST00000358170 CECR9P0C854 216 aa6.94□□□□□ -1.3
CD46-205ENST00000358170 EIF2S3P41091 472 aaKnown RBP6.94□□□□□ -1.3
CD46-205ENST00000358170 ELOBQ15370 118 aa6.94□□□□□ -1.3
CD46-205ENST00000358170 GABRA6Q16445 453 aa6.94□□□□□ -1.3
CD46-205ENST00000358170 CDPF1Q6NVV7 123 aa6.94□□□□□ -1.3
CD46-205ENST00000358170 MUC6Q6W4X9 2439 aa6.94□□□□□ -1.3
CD46-205ENST00000358170 HEPN1Q6WQI6 88 aa6.94□□□□□ -1.3
CD46-205ENST00000358170 Q6ZS49 121 aa6.94□□□□□ -1.3
CD46-205ENST00000358170 RPP25LQ8N5L8 163 aaKnown RBP6.94□□□□□ -1.3
CD46-205ENST00000358170 OR10P1Q8NGE3 313 aa6.94□□□□□ -1.3
CD46-205ENST00000358170 PATZ1Q9HBE1 687 aaKnown RBP6.94□□□□□ -1.3
CD46-205ENST00000358170 LOC102723971A0A1B0GUV8 181 aa6.93□□□□□ -1.3
CD46-205ENST00000358170 BTBD17A6NE02 478 aa6.93□□□□□ -1.3
CD46-205ENST00000358170 M0R1B8 84 aa6.93□□□□□ -1.3
CD46-205ENST00000358170 M0R1X1 148 aa6.93□□□□□ -1.3
CD46-205ENST00000358170 HSPB1P04792 205 aaKnown RBP6.93□□□□□ -1.3
CD46-205ENST00000358170 NKX6-1P78426 367 aaPredicted RBP6.93□□□□□ -1.3
CD46-205ENST00000358170 CATR1Q13166 79 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms