RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 MBD3L2Q8NHZ7 208 aaPredicted RBP11.98□□□□□ -0.49
NIPAL3-203ENST00000358028 RNASE11Q8TAA1 199 aaKnown RBP11.98□□□□□ -0.49
NIPAL3-203ENST00000358028 UBALD1Q8TB05 177 aa11.98□□□□□ -0.49
NIPAL3-203ENST00000358028 RNF150Q9ULK6 438 aa11.98□□□□□ -0.49
NIPAL3-203ENST00000358028 KCNS2Q9ULS6 477 aa11.98□□□□□ -0.49
NIPAL3-203ENST00000358028 FAM90A26D6RGX4 464 aa11.97□□□□□ -0.49
NIPAL3-203ENST00000358028 WNT9BO14905 357 aa11.97□□□□□ -0.49
NIPAL3-203ENST00000358028 PSPNO60542 156 aa11.97□□□□□ -0.49
NIPAL3-203ENST00000358028 HSPB1P04792 205 aaKnown RBP11.97□□□□□ -0.49
NIPAL3-203ENST00000358028 OR8U8P0C7N1 319 aa11.97□□□□□ -0.49
NIPAL3-203ENST00000358028 EPHA1P21709 976 aa11.97□□□□□ -0.49
NIPAL3-203ENST00000358028 GCH1P30793 250 aa11.97□□□□□ -0.49
NIPAL3-203ENST00000358028 AKIRIN2Q53H80 203 aa11.97□□□□□ -0.49
NIPAL3-203ENST00000358028 ZNF506Q5JVG8 444 aa11.97□□□□□ -0.49
NIPAL3-203ENST00000358028 PRAMEF6Q5VXH4 476 aa11.97□□□□□ -0.49
NIPAL3-203ENST00000358028 MBNL2Q5VZF2 373 aaKnown RBP11.97□□□□□ -0.49
NIPAL3-203ENST00000358028 Q6ZR03 302 aa11.97□□□□□ -0.49
NIPAL3-203ENST00000358028 SEM1Q6ZVN7 128 aa11.97□□□□□ -0.49
NIPAL3-203ENST00000358028 ZBTB34Q8NCN2 500 aa11.97□□□□□ -0.49
NIPAL3-203ENST00000358028 CD300LFQ8TDQ1 290 aa11.97□□□□□ -0.49
NIPAL3-203ENST00000358028 MALSU1Q96EH3 234 aa11.97□□□□□ -0.49
NIPAL3-203ENST00000358028 PARD6GQ9BYG4 376 aaPredicted RBP11.97□□□□□ -0.49
NIPAL3-203ENST00000358028 KCNIP1Q9NZI2 227 aa11.97□□□□□ -0.49
NIPAL3-203ENST00000358028 FZR1Q9UM11 496 aa11.97□□□□□ -0.49
NIPAL3-203ENST00000358028 PPP1R3CQ9UQK1 317 aa11.97□□□□□ -0.49
NIPAL3-203ENST00000358028 RBM7Q9Y580 266 aaKnown RBP11.97□□□□□ -0.49
NIPAL3-203ENST00000358028 ARID1AO14497 2285 aa11.97□□□□□ -0.49
NIPAL3-203ENST00000358028 ITPR2Q14571 2701 aa11.97□□□□□ -0.49
NIPAL3-203ENST00000358028 ZNF98A6NK75 572 aa11.97□□□□□ -0.49
NIPAL3-203ENST00000358028 OR5H1A6NKK0 313 aa11.97□□□□□ -0.49
NIPAL3-203ENST00000358028 A6NLC8 198 aa11.97□□□□□ -0.49
NIPAL3-203ENST00000358028 SYNGR2O43760 224 aa11.97□□□□□ -0.49
NIPAL3-203ENST00000358028 NXPH3O95157 252 aa11.97□□□□□ -0.49
NIPAL3-203ENST00000358028 AGAP20933 346 aa11.97□□□□□ -0.49
NIPAL3-203ENST00000358028 CEACAM6P40199 344 aa11.97□□□□□ -0.49
NIPAL3-203ENST00000358028 FABP6P51161 128 aa11.97□□□□□ -0.49
NIPAL3-203ENST00000358028 AKR1D1P51857 326 aa11.97□□□□□ -0.49
NIPAL3-203ENST00000358028 CDSNQ15517 529 aa11.97□□□□□ -0.49
NIPAL3-203ENST00000358028 MSMO1Q15800 293 aa11.97□□□□□ -0.49
NIPAL3-203ENST00000358028 SLC35E4Q6ICL7 350 aa11.97□□□□□ -0.49
NIPAL3-203ENST00000358028 WDR82Q6UXN9 313 aa11.97□□□□□ -0.49
NIPAL3-203ENST00000358028 ETV3LQ6ZN32 361 aa11.97□□□□□ -0.49
NIPAL3-203ENST00000358028 ACP7Q6ZNF0 438 aa11.97□□□□□ -0.49
NIPAL3-203ENST00000358028 BEND4Q6ZU67 534 aa11.97□□□□□ -0.49
NIPAL3-203ENST00000358028 TMEM217Q8N7C4 229 aa11.97□□□□□ -0.49
NIPAL3-203ENST00000358028 OR10G4Q8NGN3 311 aa11.97□□□□□ -0.49
NIPAL3-203ENST00000358028 SFT2D1Q8WV19 159 aa11.97□□□□□ -0.49
NIPAL3-203ENST00000358028 ITLN2Q8WWU7 325 aaPredicted RBP11.97□□□□□ -0.49
NIPAL3-203ENST00000358028 PSMG3Q9BT73 122 aaPredicted RBP11.97□□□□□ -0.49
NIPAL3-203ENST00000358028 COA4Q9NYJ1 87 aa11.97□□□□□ -0.49
NIPAL3-203ENST00000358028 GPR37O15354 613 aa11.96□□□□□ -0.49
NIPAL3-203ENST00000358028 IGKV1-39P01597 117 aa11.96□□□□□ -0.49
NIPAL3-203ENST00000358028 IGKV1D-39P04432 117 aa11.96□□□□□ -0.49
NIPAL3-203ENST00000358028 OR13C7P0DN81 318 aa11.96□□□□□ -0.49
NIPAL3-203ENST00000358028 C1orf174Q8IYL3 243 aa11.96□□□□□ -0.49
NIPAL3-203ENST00000358028 ZNF295-AS1Q8N0V1 137 aa11.96□□□□□ -0.49
NIPAL3-203ENST00000358028 FAM169BQ8N8A8 192 aa11.96□□□□□ -0.49
NIPAL3-203ENST00000358028 ESRP2Q9H6T0 727 aaKnown RBP11.96□□□□□ -0.49
NIPAL3-203ENST00000358028 CACNG5Q9UF02 275 aa11.96□□□□□ -0.49
NIPAL3-203ENST00000358028 SLC25A15Q9Y619 301 aa11.96□□□□□ -0.49
NIPAL3-203ENST00000358028 HCFC1P51610 2035 aa11.96□□□□□ -0.5
NIPAL3-203ENST00000358028 SRP19P09132 144 aaKnown RBP11.95□□□□□ -0.5
NIPAL3-203ENST00000358028 RAB5AP20339 215 aa11.95□□□□□ -0.5
NIPAL3-203ENST00000358028 AKR1C3P42330 323 aa11.95□□□□□ -0.5
NIPAL3-203ENST00000358028 RPL35P42766 123 aaKnown RBP11.95□□□□□ -0.5
NIPAL3-203ENST00000358028 OR3A1P47881 315 aa11.95□□□□□ -0.5
NIPAL3-203ENST00000358028 HBG1P69891 147 aa11.95□□□□□ -0.5
NIPAL3-203ENST00000358028 HBG2P69892 147 aa11.95□□□□□ -0.5
NIPAL3-203ENST00000358028 CCL20P78556 96 aa11.95□□□□□ -0.5
NIPAL3-203ENST00000358028 KHDC3LQ587J8 217 aa11.95□□□□□ -0.5
NIPAL3-203ENST00000358028 MRGPRGQ86SM5 289 aa11.95□□□□□ -0.5
NIPAL3-203ENST00000358028 DRAM1Q8N682 238 aa11.95□□□□□ -0.5
NIPAL3-203ENST00000358028 OR1L1Q8NH94 360 aa11.95□□□□□ -0.5
NIPAL3-203ENST00000358028 SCGB1C1Q8TD33 95 aa11.95□□□□□ -0.5
NIPAL3-203ENST00000358028 RARRES2Q99969 163 aa11.95□□□□□ -0.5
NIPAL3-203ENST00000358028 ABHD14AQ9BUJ0 271 aa11.95□□□□□ -0.5
NIPAL3-203ENST00000358028 TOLLIPQ9H0E2 274 aa11.95□□□□□ -0.5
NIPAL3-203ENST00000358028 MSL2Q9HCI7 577 aa11.95□□□□□ -0.5
NIPAL3-203ENST00000358028 UFSP2Q9NUQ7 469 aa11.95□□□□□ -0.5
NIPAL3-203ENST00000358028 NOTCH2Q04721 2471 aa11.95□□□□□ -0.5
NIPAL3-203ENST00000358028 A0A087WWC5 75 aa11.95□□□□□ -0.5
NIPAL3-203ENST00000358028 A0A1B0GWJ7 208 aa11.95□□□□□ -0.5
NIPAL3-203ENST00000358028 A1L4Q6 167 aa11.95□□□□□ -0.5
NIPAL3-203ENST00000358028 OOEPA6NGQ2 149 aa11.95□□□□□ -0.5
NIPAL3-203ENST00000358028 SCAF4O95104 1147 aaKnown RBP11.95□□□□□ -0.5
NIPAL3-203ENST00000358028 IGKV1-5P01602 117 aa11.95□□□□□ -0.5
NIPAL3-203ENST00000358028 ZNF585BQ52M93 769 aa11.95□□□□□ -0.5
NIPAL3-203ENST00000358028 HIST2H2BCQ6DN03 193 aa11.95□□□□□ -0.5
NIPAL3-203ENST00000358028 SLC25A24Q6NUK1 477 aa11.95□□□□□ -0.5
NIPAL3-203ENST00000358028 RND1Q92730 232 aa11.95□□□□□ -0.5
NIPAL3-203ENST00000358028 A0A0G2JNJ9 132 aa11.94□□□□□ -0.5
NIPAL3-203ENST00000358028 A0A1W2PPH5 198 aa11.94□□□□□ -0.5
NIPAL3-203ENST00000358028 C12orf77C9JDV5 145 aa11.94□□□□□ -0.5
NIPAL3-203ENST00000358028 CLDN1O95832 211 aa11.94□□□□□ -0.5
NIPAL3-203ENST00000358028 ZNF16P17020 682 aaPredicted RBP11.94□□□□□ -0.5
NIPAL3-203ENST00000358028 SERF2P84101 59 aa11.94□□□□□ -0.5
NIPAL3-203ENST00000358028 HOXA4Q00056 320 aaPredicted RBP11.94□□□□□ -0.5
NIPAL3-203ENST00000358028 RUNX1Q01196 453 aa11.94□□□□□ -0.5
NIPAL3-203ENST00000358028 AESQ08117 197 aa11.94□□□□□ -0.5
NIPAL3-203ENST00000358028 MZT1Q08AG7 82 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms