RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 CHCHD2Q9Y6H1 151 aaPredicted RBP9.03□□□□□ -0.96
CAPN3-205ENST00000357568 ARID1AO14497 2285 aa9.03□□□□□ -0.96
CAPN3-205ENST00000357568 SHANK1Q9Y566 2161 aa9.02□□□□□ -0.96
CAPN3-205ENST00000357568 IGKV1D-33P01593 117 aa9.02□□□□□ -0.97
CAPN3-205ENST00000357568 IGKV1-33P01594 117 aa9.02□□□□□ -0.97
CAPN3-205ENST00000357568 UMODP07911 640 aa9.02□□□□□ -0.97
CAPN3-205ENST00000357568 NPSP0C0P6 89 aa9.02□□□□□ -0.97
CAPN3-205ENST00000357568 PSG2P11465 335 aa9.02□□□□□ -0.97
CAPN3-205ENST00000357568 CARD18P57730 90 aa9.02□□□□□ -0.97
CAPN3-205ENST00000357568 Q6ZRM9 215 aa9.02□□□□□ -0.97
CAPN3-205ENST00000357568 LINC01551Q86U37 167 aa9.02□□□□□ -0.97
CAPN3-205ENST00000357568 CPEB3Q8NE35 698 aaKnown RBP9.02□□□□□ -0.97
CAPN3-205ENST00000357568 OR10V1Q8NGI7 309 aa9.02□□□□□ -0.97
CAPN3-205ENST00000357568 CMTM2Q8TAZ6 248 aa9.02□□□□□ -0.97
CAPN3-205ENST00000357568 RAB1CQ92928 201 aa9.02□□□□□ -0.97
CAPN3-205ENST00000357568 LPAR2Q9HBW0 351 aa9.02□□□□□ -0.97
CAPN3-205ENST00000357568 OCIAD1Q9NX40 245 aa9.02□□□□□ -0.97
CAPN3-205ENST00000357568 MYO7BQ6PIF6 2116 aa9.02□□□□□ -0.97
CAPN3-205ENST00000357568 FAM186AA6NE01 2351 aa9.02□□□□□ -0.97
CAPN3-205ENST00000357568 USP34Q70CQ2 3546 aa9.02□□□□□ -0.97
CAPN3-205ENST00000357568 RNF212BA8MTL3 300 aa9.02□□□□□ -0.97
CAPN3-205ENST00000357568 LILRA1O75019 489 aa9.02□□□□□ -0.97
CAPN3-205ENST00000357568 SYNGR4O95473 234 aa9.02□□□□□ -0.97
CAPN3-205ENST00000357568 IGKV1-39P01597 117 aa9.02□□□□□ -0.97
CAPN3-205ENST00000357568 IGKV1D-39P04432 117 aa9.02□□□□□ -0.97
CAPN3-205ENST00000357568 MMP7P09237 267 aaPredicted RBP9.02□□□□□ -0.97
CAPN3-205ENST00000357568 ZNF32P17041 273 aa9.02□□□□□ -0.97
CAPN3-205ENST00000357568 CD82P27701 267 aa9.02□□□□□ -0.97
CAPN3-205ENST00000357568 RPL29P47914 159 aaKnown RBP9.02□□□□□ -0.97
CAPN3-205ENST00000357568 RTP5Q14D33 572 aa9.02□□□□□ -0.97
CAPN3-205ENST00000357568 COL5A1-AS1Q5SY13 56 aa9.02□□□□□ -0.97
CAPN3-205ENST00000357568 TPTE2P1Q5T6R2 138 aa9.02□□□□□ -0.97
CAPN3-205ENST00000357568 PIGCQ92535 297 aa9.02□□□□□ -0.97
CAPN3-205ENST00000357568 ZDHHC16Q969W1 377 aa9.02□□□□□ -0.97
CAPN3-205ENST00000357568 KCNIP2Q9NS61 270 aa9.02□□□□□ -0.97
CAPN3-205ENST00000357568 SLC33A1O00400 549 aaPredicted RBP9.01□□□□□ -0.97
CAPN3-205ENST00000357568 IGKV1-5P01602 117 aa9.01□□□□□ -0.97
CAPN3-205ENST00000357568 JMJD7P0C870 316 aa9.01□□□□□ -0.97
CAPN3-205ENST00000357568 ETFRF1Q6IPR1 90 aa9.01□□□□□ -0.97
CAPN3-205ENST00000357568 ACSM6Q6P461 480 aa9.01□□□□□ -0.97
CAPN3-205ENST00000357568 ZNF705AQ6ZN79 300 aaPredicted RBP9.01□□□□□ -0.97
CAPN3-205ENST00000357568 OR10G9Q8NGN4 311 aa9.01□□□□□ -0.97
CAPN3-205ENST00000357568 OR10G7Q8NGN6 311 aa9.01□□□□□ -0.97
CAPN3-205ENST00000357568 OR6C1Q96RD1 312 aa9.01□□□□□ -0.97
CAPN3-205ENST00000357568 ELOVL5Q9NYP7 299 aa9.01□□□□□ -0.97
CAPN3-205ENST00000357568 HSPB7Q9UBY9 170 aa9.01□□□□□ -0.97
CAPN3-205ENST00000357568 ZFP30Q9Y2G7 519 aa9.01□□□□□ -0.97
CAPN3-205ENST00000357568 CHTOPQ9Y3Y2 248 aaKnown RBP9.01□□□□□ -0.97
CAPN3-205ENST00000357568 UNC13CQ8NB66 2214 aa9.01□□□□□ -0.97
CAPN3-205ENST00000357568 UBE2L5PA0A1B0GUS4 154 aa9.01□□□□□ -0.97
CAPN3-205ENST00000357568 ZNF705FA8MVS1 300 aaPredicted RBP9.01□□□□□ -0.97
CAPN3-205ENST00000357568 ZNF705DP0CH99 300 aaPredicted RBP9.01□□□□□ -0.97
CAPN3-205ENST00000357568 ZNF705BP0CI00 300 aaPredicted RBP9.01□□□□□ -0.97
CAPN3-205ENST00000357568 IAPPP10997 89 aa9.01□□□□□ -0.97
CAPN3-205ENST00000357568 IRF2P14316 349 aa9.01□□□□□ -0.97
CAPN3-205ENST00000357568 BCL3P20749 454 aa9.01□□□□□ -0.97
CAPN3-205ENST00000357568 PSG4Q00888 419 aa9.01□□□□□ -0.97
CAPN3-205ENST00000357568 DCAF12Q5T6F0 453 aa9.01□□□□□ -0.97
CAPN3-205ENST00000357568 FAM78BQ5VT40 261 aa9.01□□□□□ -0.97
CAPN3-205ENST00000357568 OR4B1Q8NGF8 309 aa9.01□□□□□ -0.97
CAPN3-205ENST00000357568 OR2J1Q9GZK6 312 aa9.01□□□□□ -0.97
CAPN3-205ENST00000357568 AURKAIP1Q9NWT8 199 aaPredicted RBP9.01□□□□□ -0.97
CAPN3-205ENST00000357568 IL17BQ9UHF5 180 aa9.01□□□□□ -0.97
CAPN3-205ENST00000357568 FER1L5A0AVI2 2057 aa9.01□□□□□ -0.97
CAPN3-205ENST00000357568 TRBV9A0A0B4J1U6 114 aa9□□□□□ -0.97
CAPN3-205ENST00000357568 A0A0U1RQK1 487 aa9□□□□□ -0.97
CAPN3-205ENST00000357568 ZNF320A2RRD8 509 aa9□□□□□ -0.97
CAPN3-205ENST00000357568 C17orf112F2Z3M2 114 aa9□□□□□ -0.97
CAPN3-205ENST00000357568 NXPH3O95157 252 aa9□□□□□ -0.97
CAPN3-205ENST00000357568 KRASP01116 189 aa9□□□□□ -0.97
CAPN3-205ENST00000357568 LIFP15018 202 aa9□□□□□ -0.97
CAPN3-205ENST00000357568 Q0VG73 95 aa9□□□□□ -0.97
CAPN3-205ENST00000357568 MSMO1Q15800 293 aa9□□□□□ -0.97
CAPN3-205ENST00000357568 ARSJQ5FYB0 599 aaPredicted RBP9□□□□□ -0.97
CAPN3-205ENST00000357568 SHISA6Q6ZSJ9 500 aa9□□□□□ -0.97
CAPN3-205ENST00000357568 CCL4P13236 92 aa9□□□□□ -0.97
CAPN3-205ENST00000357568 RAC3P60763 192 aa9□□□□□ -0.97
CAPN3-205ENST00000357568 FOXC1Q12948 553 aa9□□□□□ -0.97
CAPN3-205ENST00000357568 CEACAM21Q3KPI0 293 aa9□□□□□ -0.97
CAPN3-205ENST00000357568 NUFIP2Q7Z417 695 aaKnown RBP9□□□□□ -0.97
CAPN3-205ENST00000357568 ZBTB34Q8NCN2 500 aa9□□□□□ -0.97
CAPN3-205ENST00000357568 CIB3Q96Q77 187 aaPredicted RBP9□□□□□ -0.97
CAPN3-205ENST00000357568 DEFB126Q9BYW3 111 aa9□□□□□ -0.97
CAPN3-205ENST00000357568 MSRB2Q9Y3D2 182 aa9□□□□□ -0.97
CAPN3-205ENST00000357568 C11orf94C9JXX5 98 aa8.99□□□□□ -0.97
CAPN3-205ENST00000357568 TRAPPC2LH3BP13 241 aa8.99□□□□□ -0.97
CAPN3-205ENST00000357568 PDCD1Q15116 288 aa8.99□□□□□ -0.97
CAPN3-205ENST00000357568 TMEM256Q8N2U0 113 aa8.99□□□□□ -0.97
CAPN3-205ENST00000357568 VAMP8Q9BV40 100 aa8.99□□□□□ -0.97
CAPN3-205ENST00000357568 SLC25A22Q9H936 323 aa8.99□□□□□ -0.97
CAPN3-205ENST00000357568 MSL2Q9HCI7 577 aa8.99□□□□□ -0.97
CAPN3-205ENST00000357568 LY96Q9Y6Y9 160 aa8.99□□□□□ -0.97
CAPN3-205ENST00000357568 YLPM1P49750 1951 aaKnown RBP8.99□□□□□ -0.97
CAPN3-205ENST00000357568 A0A1W2PNU3 283 aaPredicted RBP8.99□□□□□ -0.97
CAPN3-205ENST00000357568 TNFSF12O43508 249 aa8.99□□□□□ -0.97
CAPN3-205ENST00000357568 P0C879 139 aa8.99□□□□□ -0.97
CAPN3-205ENST00000357568 GCH1P30793 250 aa8.99□□□□□ -0.97
CAPN3-205ENST00000357568 TESK1Q15569 626 aa8.99□□□□□ -0.97
CAPN3-205ENST00000357568 ZNF585BQ52M93 769 aa8.99□□□□□ -0.97
CAPN3-205ENST00000357568 SPANXN5Q5MJ07 72 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms