RNA–Protein interactions for RNA: ENST00000357482.5

USP6-202, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 1 (best)

Gene USP6, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-202ENST00000357482 SERF1AO75920 110 aa12.54□□□□□ -0.4
USP6-202ENST00000357482 CTSSP25774 331 aa12.54□□□□□ -0.4
USP6-202ENST00000357482 NPBWR2P48146 333 aa12.54□□□□□ -0.4
USP6-202ENST00000357482 DCST2Q5T1A1 773 aa12.54□□□□□ -0.4
USP6-202ENST00000357482 LIAT1Q6ZQX7 453 aa12.54□□□□□ -0.4
USP6-202ENST00000357482 BAGE3Q86Y29 109 aa12.54□□□□□ -0.4
USP6-202ENST00000357482 BAGE2Q86Y30 109 aa12.54□□□□□ -0.4
USP6-202ENST00000357482 SLC22A24Q8N4F4 322 aa12.54□□□□□ -0.4
USP6-202ENST00000357482 C5orf17Q8NAS9 161 aa12.54□□□□□ -0.4
USP6-202ENST00000357482 OR1B1Q8NGR6 318 aa12.54□□□□□ -0.4
USP6-202ENST00000357482 DPF1Q92782 380 aa12.54□□□□□ -0.4
USP6-202ENST00000357482 ZDHHC11Q9H8X9 412 aa12.54□□□□□ -0.4
USP6-202ENST00000357482 LYRM4Q9HD34 91 aa12.54□□□□□ -0.4
USP6-202ENST00000357482 PGPEP1Q9NXJ5 209 aa12.54□□□□□ -0.4
USP6-202ENST00000357482 VDAC3Q9Y277 283 aa12.54□□□□□ -0.4
USP6-202ENST00000357482 PCSK5Q92824 1860 aa12.54□□□□□ -0.4
USP6-202ENST00000357482 LOC102724200A0A096LPH7 203 aaPredicted RBP12.54□□□□□ -0.4
USP6-202ENST00000357482 CEBPZOSA8MTT3 80 aa12.54□□□□□ -0.4
USP6-202ENST00000357482 ISG15P05161 165 aa12.54□□□□□ -0.4
USP6-202ENST00000357482 HIST1H1DP16402 221 aaKnown RBP12.54□□□□□ -0.4
USP6-202ENST00000357482 AZU1P20160 251 aa12.54□□□□□ -0.4
USP6-202ENST00000357482 TMEM267Q0VDI3 215 aaPredicted RBP12.54□□□□□ -0.4
USP6-202ENST00000357482 RAB31Q13636 194 aa12.54□□□□□ -0.4
USP6-202ENST00000357482 PRTGQ2VWP7 1150 aa12.54□□□□□ -0.4
USP6-202ENST00000357482 FFAR4Q5NUL3 377 aa12.54□□□□□ -0.4
USP6-202ENST00000357482 MRPL2Q5T653 305 aaKnown RBP12.54□□□□□ -0.4
USP6-202ENST00000357482 LINC00114Q6XXX2 140 aa12.54□□□□□ -0.4
USP6-202ENST00000357482 ZNF440Q8IYI8 595 aa12.54□□□□□ -0.4
USP6-202ENST00000357482 SHISA5Q8N114 240 aa12.54□□□□□ -0.4
USP6-202ENST00000357482 OR4N2Q8NGD1 307 aa12.54□□□□□ -0.4
USP6-202ENST00000357482 C18orf12Q96KH6 178 aa12.54□□□□□ -0.4
USP6-202ENST00000357482 TP53TG3Q9ULZ0 132 aa12.54□□□□□ -0.4
USP6-202ENST00000357482 SEC16AO15027 2179 aa12.54□□□□□ -0.4
USP6-202ENST00000357482 TRAV9-2A0A087WT02 112 aa12.53□□□□□ -0.4
USP6-202ENST00000357482 GAGE10A6NGK3 116 aa12.53□□□□□ -0.4
USP6-202ENST00000357482 TMEM14DPA8MWL7 114 aa12.53□□□□□ -0.4
USP6-202ENST00000357482 CD33P20138 364 aa12.53□□□□□ -0.4
USP6-202ENST00000357482 ADMP35318 185 aa12.53□□□□□ -0.4
USP6-202ENST00000357482 LHX2P50458 406 aa12.53□□□□□ -0.4
USP6-202ENST00000357482 STUMQ69YW2 141 aa12.53□□□□□ -0.4
USP6-202ENST00000357482 MFSD12Q6NUT3 480 aa12.53□□□□□ -0.4
USP6-202ENST00000357482 WDR82Q6UXN9 313 aa12.53□□□□□ -0.4
USP6-202ENST00000357482 MMABQ96EY8 250 aaPredicted RBP12.53□□□□□ -0.4
USP6-202ENST00000357482 ZNF780BQ9Y6R6 833 aa12.53□□□□□ -0.4
USP6-202ENST00000357482 MED13Q9UHV7 2174 aa12.53□□□□□ -0.4
USP6-202ENST00000357482 TRBV9A0A0B4J1U6 114 aa12.52□□□□□ -0.4
USP6-202ENST00000357482 TRAV34A0A0B4J273 112 aa12.52□□□□□ -0.4
USP6-202ENST00000357482 SERINC4A6NH21 518 aa12.52□□□□□ -0.4
USP6-202ENST00000357482 OR11H12B2RN74 326 aa12.52□□□□□ -0.4
USP6-202ENST00000357482 XRCC2O43543 280 aa12.52□□□□□ -0.4
USP6-202ENST00000357482 ZNF93P35789 620 aaPredicted RBP12.52□□□□□ -0.4
USP6-202ENST00000357482 GUCA1AP43080 201 aaPredicted RBP12.52□□□□□ -0.4
USP6-202ENST00000357482 PSG9Q00887 426 aa12.52□□□□□ -0.4
USP6-202ENST00000357482 ROM1Q03395 351 aa12.52□□□□□ -0.4
USP6-202ENST00000357482 FMODQ06828 376 aa12.52□□□□□ -0.4
USP6-202ENST00000357482 UNC119Q13432 240 aa12.52□□□□□ -0.4
USP6-202ENST00000357482 TMEM187Q14656 261 aa12.52□□□□□ -0.4
USP6-202ENST00000357482 C1orf140Q5VVS0 124 aa12.52□□□□□ -0.4
USP6-202ENST00000357482 MRPL54Q6P161 138 aaKnown RBP12.52□□□□□ -0.4
USP6-202ENST00000357482 KCTD18Q6PI47 426 aaPredicted RBP12.52□□□□□ -0.4
USP6-202ENST00000357482 CA13Q8N1Q1 262 aa12.52□□□□□ -0.4
USP6-202ENST00000357482 C17orf78Q8N4C9 275 aa12.52□□□□□ -0.4
USP6-202ENST00000357482 OR11H1Q8NG94 326 aa12.52□□□□□ -0.4
USP6-202ENST00000357482 OR10P1Q8NGE3 313 aa12.52□□□□□ -0.4
USP6-202ENST00000357482 OR11H2Q8NH07 326 aa12.52□□□□□ -0.4
USP6-202ENST00000357482 SLC25A40Q8TBP6 338 aa12.52□□□□□ -0.4
USP6-202ENST00000357482 SFRP2Q96HF1 295 aa12.52□□□□□ -0.4
USP6-202ENST00000357482 SDF2Q99470 211 aa12.52□□□□□ -0.4
USP6-202ENST00000357482 ELOVL3Q9HB03 270 aa12.52□□□□□ -0.4
USP6-202ENST00000357482 TBL2Q9Y4P3 447 aaKnown RBP12.52□□□□□ -0.4
USP6-202ENST00000357482 LRRC3CA6NJW4 275 aa12.52□□□□□ -0.41
USP6-202ENST00000357482 MPZL1O95297 269 aa12.52□□□□□ -0.41
USP6-202ENST00000357482 HAND1O96004 215 aa12.52□□□□□ -0.41
USP6-202ENST00000357482 GYPAP02724 150 aa12.52□□□□□ -0.41
USP6-202ENST00000357482 VSIG8P0DPA2 414 aa12.52□□□□□ -0.41
USP6-202ENST00000357482 LINC00310P59036 64 aa12.52□□□□□ -0.41
USP6-202ENST00000357482 RHOBP62745 196 aa12.52□□□□□ -0.41
USP6-202ENST00000357482 CSNK2A1P68400 391 aaPredicted RBP12.52□□□□□ -0.41
USP6-202ENST00000357482 RBMXL3Q8N7X1 1067 aaKnown RBP12.52□□□□□ -0.41
USP6-202ENST00000357482 CSNK2A3Q8NEV1 391 aa12.52□□□□□ -0.41
USP6-202ENST00000357482 OTOSQ8NHW6 89 aa12.52□□□□□ -0.41
USP6-202ENST00000357482 ATP5SQ99766 215 aa12.52□□□□□ -0.41
USP6-202ENST00000357482 SPIN2AQ99865 258 aa12.52□□□□□ -0.41
USP6-202ENST00000357482 SPIN2BQ9BPZ2 258 aa12.52□□□□□ -0.41
USP6-202ENST00000357482 PSMG3Q9BT73 122 aaPredicted RBP12.52□□□□□ -0.41
USP6-202ENST00000357482 NRN1Q9NPD7 142 aa12.52□□□□□ -0.41
USP6-202ENST00000357482 A0A1B0GWA3 101 aa12.51□□□□□ -0.41
USP6-202ENST00000357482 BLACEA4D250 179 aa12.51□□□□□ -0.41
USP6-202ENST00000357482 G3V3Y1 287 aa12.51□□□□□ -0.41
USP6-202ENST00000357482 S1PR2O95136 353 aa12.51□□□□□ -0.41
USP6-202ENST00000357482 IFNA5P01569 189 aa12.51□□□□□ -0.41
USP6-202ENST00000357482 MEF2BQ02080 365 aaPredicted RBP12.51□□□□□ -0.41
USP6-202ENST00000357482 OR10J3Q5JRS4 329 aa12.51□□□□□ -0.41
USP6-202ENST00000357482 PRAMEF5Q5TYX0 476 aa12.51□□□□□ -0.41
USP6-202ENST00000357482 FAM78BQ5VT40 261 aa12.51□□□□□ -0.41
USP6-202ENST00000357482 PRAMEF6Q5VXH4 476 aa12.51□□□□□ -0.41
USP6-202ENST00000357482 UFSP1Q6NVU6 142 aa12.51□□□□□ -0.41
USP6-202ENST00000357482 CALHM1Q8IU99 346 aa12.51□□□□□ -0.41
USP6-202ENST00000357482 OR4N5Q8IXE1 308 aa12.51□□□□□ -0.41
USP6-202ENST00000357482 LRRC25Q8N386 305 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms