RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 MRPL20Q9BYC9 149 aaKnown RBP20.5■□□□□ 0.87
SSBP3-202ENST00000357475 FN1P02751 2386 aaKnown RBP20.5■□□□□ 0.87
SSBP3-202ENST00000357475 NAV3Q8IVL0 2385 aa20.5■□□□□ 0.87
SSBP3-202ENST00000357475 TEP1Q99973 2627 aaKnown RBP20.5■□□□□ 0.87
SSBP3-202ENST00000357475 CENPXA8MT69 81 aa20.49■□□□□ 0.87
SSBP3-202ENST00000357475 PGAM2P15259 253 aa20.49■□□□□ 0.87
SSBP3-202ENST00000357475 RPEQ96AT9 228 aa20.49■□□□□ 0.87
SSBP3-202ENST00000357475 VSIG4Q9Y279 399 aa20.49■□□□□ 0.87
SSBP3-202ENST00000357475 M0R1X1 148 aa20.48■□□□□ 0.87
SSBP3-202ENST00000357475 UCP3P55916 312 aa20.48■□□□□ 0.87
SSBP3-202ENST00000357475 EIF4EBP1Q13541 118 aaPredicted RBP20.48■□□□□ 0.87
SSBP3-202ENST00000357475 DEFB112Q30KQ8 113 aa20.48■□□□□ 0.87
SSBP3-202ENST00000357475 PHLDA2Q53GA4 152 aa20.48■□□□□ 0.87
SSBP3-202ENST00000357475 C9orf139Q6ZV77 190 aa20.48■□□□□ 0.87
SSBP3-202ENST00000357475 POC5Q8NA72 575 aa20.48■□□□□ 0.87
SSBP3-202ENST00000357475 MALSU1Q96EH3 234 aa20.48■□□□□ 0.87
SSBP3-202ENST00000357475 ZNF48Q96MX3 618 aaPredicted RBP20.48■□□□□ 0.87
SSBP3-202ENST00000357475 RSRP1Q9BUV0 290 aa20.48■□□□□ 0.87
SSBP3-202ENST00000357475 A0A1W2PPI3 338 aa20.48■□□□□ 0.87
SSBP3-202ENST00000357475 HNF1AP20823 631 aa20.48■□□□□ 0.87
SSBP3-202ENST00000357475 IL3RAP26951 378 aa20.48■□□□□ 0.87
SSBP3-202ENST00000357475 DCTN2Q13561 401 aaKnown RBP20.48■□□□□ 0.87
SSBP3-202ENST00000357475 GLDNQ6ZMI3 551 aaPredicted RBP20.48■□□□□ 0.87
SSBP3-202ENST00000357475 FAM216AQ8WUB2 273 aa20.48■□□□□ 0.87
SSBP3-202ENST00000357475 BEX2Q9BXY8 128 aa20.48■□□□□ 0.87
SSBP3-202ENST00000357475 GAB2Q9UQC2 676 aa20.48■□□□□ 0.87
SSBP3-202ENST00000357475 SLC6A1P30531 599 aa20.47■□□□□ 0.87
SSBP3-202ENST00000357475 CEACAM3P40198 252 aa20.47■□□□□ 0.87
SSBP3-202ENST00000357475 BPIFB3P59826 476 aa20.47■□□□□ 0.87
SSBP3-202ENST00000357475 ZNF816Q0VGE8 651 aaPredicted RBP20.47■□□□□ 0.87
SSBP3-202ENST00000357475 FBLN7Q53RD9 439 aa20.47■□□□□ 0.87
SSBP3-202ENST00000357475 TGIF2LXQ8IUE1 241 aa20.47■□□□□ 0.87
SSBP3-202ENST00000357475 RTBDNQ9BSG5 229 aaPredicted RBP20.47■□□□□ 0.87
SSBP3-202ENST00000357475 C5orf66Q9H5L9 145 aa20.47■□□□□ 0.87
SSBP3-202ENST00000357475 GPR132Q9UNW8 380 aa20.47■□□□□ 0.87
SSBP3-202ENST00000357475 FLVCR2Q9UPI3 526 aa20.47■□□□□ 0.87
SSBP3-202ENST00000357475 IGHV3-72A0A0B4J1Y9 119 aa20.46■□□□□ 0.87
SSBP3-202ENST00000357475 IGHV1-3A0A0C4DH29 117 aa20.46■□□□□ 0.87
SSBP3-202ENST00000357475 LINC00473A8K010 186 aa20.46■□□□□ 0.87
SSBP3-202ENST00000357475 NDUFB6O95139 128 aa20.46■□□□□ 0.87
SSBP3-202ENST00000357475 CT45A6P0DMU7 189 aa20.46■□□□□ 0.87
SSBP3-202ENST00000357475 CT45A5P0DMU8 189 aa20.46■□□□□ 0.87
SSBP3-202ENST00000357475 CT45A7P0DMV0 189 aa20.46■□□□□ 0.87
SSBP3-202ENST00000357475 RPL30P62888 115 aaKnown RBP20.46■□□□□ 0.87
SSBP3-202ENST00000357475 NRARPQ7Z6K4 114 aa20.46■□□□□ 0.87
SSBP3-202ENST00000357475 SLC38A6Q8IZM9 456 aa20.46■□□□□ 0.87
SSBP3-202ENST00000357475 ZNF436-AS1Q8NC38 126 aaPredicted RBP20.46■□□□□ 0.87
SSBP3-202ENST00000357475 BVESQ8NE79 360 aa20.46■□□□□ 0.87
SSBP3-202ENST00000357475 S1PR3Q99500 378 aa20.46■□□□□ 0.87
SSBP3-202ENST00000357475 NABP2Q9BQ15 211 aa20.46■□□□□ 0.87
SSBP3-202ENST00000357475 PALMDQ9NP74 551 aa20.46■□□□□ 0.87
SSBP3-202ENST00000357475 GAPDHP04406 335 aaKnown RBP20.45■□□□□ 0.86
SSBP3-202ENST00000357475 RAB13P51153 203 aa20.45■□□□□ 0.86
SSBP3-202ENST00000357475 MZT2BQ6NZ67 158 aa20.45■□□□□ 0.86
SSBP3-202ENST00000357475 TEX29Q8N6K0 151 aa20.45■□□□□ 0.86
SSBP3-202ENST00000357475 ZNF383Q8NA42 475 aa20.45■□□□□ 0.86
SSBP3-202ENST00000357475 ADAD2Q8NCV1 583 aaKnown RBP20.45■□□□□ 0.86
SSBP3-202ENST00000357475 GHITMQ9H3K2 345 aa20.45■□□□□ 0.86
SSBP3-202ENST00000357475 OCEL1Q9H607 264 aa20.45■□□□□ 0.86
SSBP3-202ENST00000357475 CDC42EP3Q9UKI2 254 aa20.45■□□□□ 0.86
SSBP3-202ENST00000357475 FAM96BQ9Y3D0 163 aa20.45■□□□□ 0.86
SSBP3-202ENST00000357475 GPR31O00270 319 aa20.44■□□□□ 0.86
SSBP3-202ENST00000357475 TIMM23O14925 209 aa20.44■□□□□ 0.86
SSBP3-202ENST00000357475 SPNP16150 400 aa20.44■□□□□ 0.86
SSBP3-202ENST00000357475 CD24P25063 80 aa20.44■□□□□ 0.86
SSBP3-202ENST00000357475 RBMS2Q15434 407 aaKnown RBP20.44■□□□□ 0.86
SSBP3-202ENST00000357475 CFHR4Q92496 578 aa20.44■□□□□ 0.86
SSBP3-202ENST00000357475 SLC2A9Q9NRM0 540 aa20.44■□□□□ 0.86
SSBP3-202ENST00000357475 PGLYRP1O75594 196 aaPredicted RBP20.43■□□□□ 0.86
SSBP3-202ENST00000357475 DUTP33316 252 aaKnown RBP20.43■□□□□ 0.86
SSBP3-202ENST00000357475 DEFA1P59665 94 aa20.43■□□□□ 0.86
SSBP3-202ENST00000357475 DEFA3P59666 94 aa20.43■□□□□ 0.86
SSBP3-202ENST00000357475 FAM71F2Q6NXP2 309 aa20.43■□□□□ 0.86
SSBP3-202ENST00000357475 MOB3BQ86TA1 216 aa20.43■□□□□ 0.86
SSBP3-202ENST00000357475 FAM240BA0A1B0GVZ2 78 aa20.43■□□□□ 0.86
SSBP3-202ENST00000357475 SLC22A5O76082 557 aa20.43■□□□□ 0.86
SSBP3-202ENST00000357475 RLN1P04808 185 aa20.43■□□□□ 0.86
SSBP3-202ENST00000357475 CTSDP07339 412 aaPredicted RBP20.43■□□□□ 0.86
SSBP3-202ENST00000357475 FBP1P09467 338 aa20.43■□□□□ 0.86
SSBP3-202ENST00000357475 SRD5A1P18405 259 aa20.43■□□□□ 0.86
SSBP3-202ENST00000357475 PIGPP57054 158 aa20.43■□□□□ 0.86
SSBP3-202ENST00000357475 SURF2Q15527 256 aaPredicted RBP20.43■□□□□ 0.86
SSBP3-202ENST00000357475 TUSC1Q2TAM9 212 aa20.43■□□□□ 0.86
SSBP3-202ENST00000357475 OR2B11Q5JQS5 317 aa20.43■□□□□ 0.86
SSBP3-202ENST00000357475 TMEM230Q96A57 120 aa20.43■□□□□ 0.86
SSBP3-202ENST00000357475 AKR1E2Q96JD6 320 aa20.43■□□□□ 0.86
SSBP3-202ENST00000357475 SLC25A21Q9BQT8 299 aaPredicted RBP20.43■□□□□ 0.86
SSBP3-202ENST00000357475 MEGF9Q9H1U4 602 aa20.43■□□□□ 0.86
SSBP3-202ENST00000357475 DPAGT1Q9H3H5 408 aa20.43■□□□□ 0.86
SSBP3-202ENST00000357475 TCRBP04435 133 aa20.42■□□□□ 0.86
SSBP3-202ENST00000357475 ECI1P42126 302 aa20.42■□□□□ 0.86
SSBP3-202ENST00000357475 MSMO1Q15800 293 aa20.42■□□□□ 0.86
SSBP3-202ENST00000357475 LPCAT3Q6P1A2 487 aa20.42■□□□□ 0.86
SSBP3-202ENST00000357475 TMED4Q7Z7H5 227 aa20.42■□□□□ 0.86
SSBP3-202ENST00000357475 OR51H1Q8NH63 302 aa20.42■□□□□ 0.86
SSBP3-202ENST00000357475 ZFAND1Q8TCF1 268 aa20.42■□□□□ 0.86
SSBP3-202ENST00000357475 OOSP1A8MZH6 123 aa20.41■□□□□ 0.86
SSBP3-202ENST00000357475 BRWD1-AS2P59051 145 aa20.41■□□□□ 0.86
SSBP3-202ENST00000357475 TBC1D26Q86UD7 250 aa20.41■□□□□ 0.86
SSBP3-202ENST00000357475 OR8H3Q8N146 312 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 365.2 ms