RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 S100A7AQ86SG5 101 aa7.02□□□□□ -1.29
CDC42SE1-201ENST00000357235 ODF3L1Q8IXM7 274 aa7.02□□□□□ -1.29
CDC42SE1-201ENST00000357235 SIGLEC12Q96PQ1 595 aa7.02□□□□□ -1.29
CDC42SE1-201ENST00000357235 SMIM7Q9BQ49 75 aa7.02□□□□□ -1.29
CDC42SE1-201ENST00000357235 SF3B5Q9BWJ5 86 aaKnown RBP7.02□□□□□ -1.29
CDC42SE1-201ENST00000357235 OR2H1Q9GZK4 316 aa7.02□□□□□ -1.29
CDC42SE1-201ENST00000357235 UQCR10Q9UDW1 63 aa7.02□□□□□ -1.29
CDC42SE1-201ENST00000357235 SLC45A2Q9UMX9 530 aa7.02□□□□□ -1.29
CDC42SE1-201ENST00000357235 RNF115Q9Y4L5 304 aa7.02□□□□□ -1.29
CDC42SE1-201ENST00000357235 COL6A3P12111 3177 aa7.02□□□□□ -1.29
CDC42SE1-201ENST00000357235 TRAV30A0A087WSZ9 112 aa7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 LOC102724200A0A096LPH7 203 aaPredicted RBP7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 ZNF732B4DXR9 585 aa7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 J3QW42 95 aa7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 YPEL1O60688 119 aa7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 BCL2P10415 239 aa7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 FKBP2P26885 142 aaKnown RBP7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 ID3Q02535 119 aa7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 RTP5Q14D33 572 aa7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 MRPL21Q7Z2W9 205 aaKnown RBP7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 VASH2Q86V25 355 aa7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 RPS19BP1Q86WX3 136 aaKnown RBP7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 MCEMP1Q8IX19 187 aa7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 CISD2Q8N5K1 135 aaKnown RBP7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 OR4B1Q8NGF8 309 aa7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 CMTM2Q8TAZ6 248 aa7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 PSMF1Q92530 271 aa7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 BCL2L2Q92843 193 aaPredicted RBP7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 GPR146Q96CH1 333 aa7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 TMEM56Q96MV1 263 aa7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 YPEL2Q96QA6 119 aa7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 BET1LQ9NYM9 111 aa7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 CRIM1Q9NZV1 1036 aa7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 TAAR3PQ9P1P4 343 aa7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 TMEM56-RWDD3S4R434 201 aa7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 MUC3AQ02505 3323 aa7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 A0A1B0GUS0 222 aa7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 UBE2L5PA0A1B0GUS4 154 aa7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 CD300LBA8K4G0 201 aa7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 TRAPPC2LH3BP13 241 aa7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 PGLYRP1O75594 196 aaPredicted RBP7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 TPPP2P59282 170 aa7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 UBE2NP61088 152 aaKnown RBP7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 BAXQ07812 192 aa7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 EIF3IQ13347 325 aaKnown RBP7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 NMSQ5H8A3 153 aa7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 Q6ZWC4 215 aa7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 CADM4Q8NFZ8 388 aa7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 OR2T10Q8NGZ9 312 aa7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 LHX4Q969G2 390 aa7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 LOXL4Q96JB6 756 aa7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 PSENENQ9NZ42 101 aa7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 IGKV1-6A0A0C4DH72 117 aa7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 OR6C6A6NF89 314 aa7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 RNF212BA8MTL3 300 aa7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 SYNGR1O43759 233 aa7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 RBMXL2O75526 392 aaKnown RBP7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 HRASP01112 189 aa7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 RFPL3SP0C7P2 107 aa7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 TNFSF4P23510 183 aa7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 PAX9P55771 341 aa7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 RAC3P60763 192 aa7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 PCOLCEQ15113 449 aa7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 PRR27Q6MZM9 219 aa7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 C20orf204Q6ZNR8 217 aa7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 Q6ZRM9 215 aa7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 OR10D3Q8NH80 312 aa7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 RNF138Q8WVD3 245 aa7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 SLC25A22Q9H936 323 aa7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 PRSS50Q9UI38 385 aa7.01□□□□□ -1.29
CDC42SE1-201ENST00000357235 DOCK11Q5JSL3 2073 aa7□□□□□ -1.29
CDC42SE1-201ENST00000357235 PI4KAP42356 2102 aa7□□□□□ -1.29
CDC42SE1-201ENST00000357235 KIR2DS1A0A191URI9 304 aa7□□□□□ -1.29
CDC42SE1-201ENST00000357235 NUPR1O60356 82 aa7□□□□□ -1.29
CDC42SE1-201ENST00000357235 TUSC2O75896 110 aa7□□□□□ -1.29
CDC42SE1-201ENST00000357235 P04436 131 aa7□□□□□ -1.29
CDC42SE1-201ENST00000357235 DEFA4P12838 97 aa7□□□□□ -1.29
CDC42SE1-201ENST00000357235 F2RP25116 425 aa7□□□□□ -1.29
CDC42SE1-201ENST00000357235 UCP1P25874 307 aa7□□□□□ -1.29
CDC42SE1-201ENST00000357235 KIR2DS4P43632 304 aa7□□□□□ -1.29
CDC42SE1-201ENST00000357235 HINT1P49773 126 aaPredicted RBP7□□□□□ -1.29
CDC42SE1-201ENST00000357235 PAFAH1B2P68402 229 aa7□□□□□ -1.29
CDC42SE1-201ENST00000357235 KIR2DS1Q14954 304 aa7□□□□□ -1.29
CDC42SE1-201ENST00000357235 EXT1Q16394 746 aa7□□□□□ -1.29
CDC42SE1-201ENST00000357235 BSXQ3C1V8 233 aa7□□□□□ -1.29
CDC42SE1-201ENST00000357235 MORN2Q502X0 79 aa7□□□□□ -1.29
CDC42SE1-201ENST00000357235 MKXQ8IYA7 352 aa7□□□□□ -1.29
CDC42SE1-201ENST00000357235 HSPB9Q9BQS6 159 aa7□□□□□ -1.29
CDC42SE1-201ENST00000357235 PATZ1Q9HBE1 687 aaKnown RBP7□□□□□ -1.29
CDC42SE1-201ENST00000357235 SLC39A9Q9NUM3 307 aa7□□□□□ -1.29
CDC42SE1-201ENST00000357235 PLA2G3Q9NZ20 509 aa7□□□□□ -1.29
CDC42SE1-201ENST00000357235 DNAJC13O75165 2243 aa7□□□□□ -1.29
CDC42SE1-201ENST00000357235 NBEAQ8NFP9 2946 aa7□□□□□ -1.29
CDC42SE1-201ENST00000357235 TRAV34A0A0B4J273 112 aa7□□□□□ -1.29
CDC42SE1-201ENST00000357235 LILRA1O75019 489 aa7□□□□□ -1.29
CDC42SE1-201ENST00000357235 ZNF737O75373 536 aa7□□□□□ -1.29
CDC42SE1-201ENST00000357235 MMP23AO75900 390 aa7□□□□□ -1.29
CDC42SE1-201ENST00000357235 CLDN1O95832 211 aa7□□□□□ -1.29
CDC42SE1-201ENST00000357235 SRFP11831 508 aa7□□□□□ -1.29
CDC42SE1-201ENST00000357235 CCL4P13236 92 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms