RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 C5orf24Q7Z6I8 188 aa12.11□□□□□ -0.47
SREBF1-202ENST00000355815 KCNE4Q8WWG9 221 aa12.11□□□□□ -0.47
SREBF1-202ENST00000355815 RPRMQ9NS64 109 aa12.11□□□□□ -0.47
SREBF1-202ENST00000355815 TMEM140Q9NV12 185 aa12.11□□□□□ -0.47
SREBF1-202ENST00000355815 ZNF107Q9UII5 783 aaPredicted RBP12.11□□□□□ -0.47
SREBF1-202ENST00000355815 STARD10Q9Y365 291 aa12.11□□□□□ -0.47
SREBF1-202ENST00000355815 PMS2P1A4D2B8 440 aa12.11□□□□□ -0.47
SREBF1-202ENST00000355815 UBE2CO00762 179 aa12.11□□□□□ -0.47
SREBF1-202ENST00000355815 HSPB1P04792 205 aaKnown RBP12.11□□□□□ -0.47
SREBF1-202ENST00000355815 IFI6P09912 130 aa12.11□□□□□ -0.47
SREBF1-202ENST00000355815 CD33P20138 364 aa12.11□□□□□ -0.47
SREBF1-202ENST00000355815 TNFSF10P50591 281 aa12.11□□□□□ -0.47
SREBF1-202ENST00000355815 PRSS3P2Q8NHM4 247 aa12.11□□□□□ -0.47
SREBF1-202ENST00000355815 RNF126Q9BV68 326 aa12.11□□□□□ -0.47
SREBF1-202ENST00000355815 TMEM38BQ9NVV0 291 aa12.11□□□□□ -0.47
SREBF1-202ENST00000355815 IGKV1-9A0A0C4DH69 117 aa12.11□□□□□ -0.47
SREBF1-202ENST00000355815 CT45A6P0DMU7 189 aa12.11□□□□□ -0.47
SREBF1-202ENST00000355815 CT45A5P0DMU8 189 aa12.11□□□□□ -0.47
SREBF1-202ENST00000355815 CT45A7P0DMV0 189 aa12.11□□□□□ -0.47
SREBF1-202ENST00000355815 SPEM2Q0P670 501 aa12.11□□□□□ -0.47
SREBF1-202ENST00000355815 OR8B8Q15620 311 aa12.11□□□□□ -0.47
SREBF1-202ENST00000355815 CT45A1Q5HYN5 189 aa12.11□□□□□ -0.47
SREBF1-202ENST00000355815 CT45A3Q8NHU0 189 aa12.11□□□□□ -0.47
SREBF1-202ENST00000355815 ANAPC16Q96DE5 110 aa12.11□□□□□ -0.47
SREBF1-202ENST00000355815 IMMP2LQ96T52 175 aa12.11□□□□□ -0.47
SREBF1-202ENST00000355815 S1PR3Q99500 378 aa12.11□□□□□ -0.47
SREBF1-202ENST00000355815 NGFP01138 241 aa12.11□□□□□ -0.47
SREBF1-202ENST00000355815 CBLN1P23435 193 aa12.11□□□□□ -0.47
SREBF1-202ENST00000355815 H1FOOQ8IZA3 346 aaPredicted RBP12.11□□□□□ -0.47
SREBF1-202ENST00000355815 ST6GALNAC6Q969X2 333 aa12.11□□□□□ -0.47
SREBF1-202ENST00000355815 OR2H1Q9GZK4 316 aa12.11□□□□□ -0.47
SREBF1-202ENST00000355815 GSX1Q9H4S2 264 aaPredicted RBP12.11□□□□□ -0.47
SREBF1-202ENST00000355815 GPR35Q9HC97 309 aa12.11□□□□□ -0.47
SREBF1-202ENST00000355815 PILRBQ9UKJ0 227 aa12.11□□□□□ -0.47
SREBF1-202ENST00000355815 TMEM14DPA8MWL7 114 aa12.1□□□□□ -0.47
SREBF1-202ENST00000355815 TRDCB7Z8K6 153 aa12.1□□□□□ -0.47
SREBF1-202ENST00000355815 HPRT1P00492 218 aa12.1□□□□□ -0.47
SREBF1-202ENST00000355815 BCL3P20749 454 aa12.1□□□□□ -0.47
SREBF1-202ENST00000355815 EIF3IQ13347 325 aaKnown RBP12.1□□□□□ -0.47
SREBF1-202ENST00000355815 POC1AQ8NBT0 407 aa12.1□□□□□ -0.47
SREBF1-202ENST00000355815 CORO2AQ92828 525 aa12.1□□□□□ -0.47
SREBF1-202ENST00000355815 FER1L6-AS2Q96M78 137 aa12.1□□□□□ -0.47
SREBF1-202ENST00000355815 COX6A1P12074 109 aa12.1□□□□□ -0.47
SREBF1-202ENST00000355815 MFAP2P55001 183 aa12.1□□□□□ -0.47
SREBF1-202ENST00000355815 PSG5Q15238 335 aa12.1□□□□□ -0.47
SREBF1-202ENST00000355815 OR8I2Q8N0Y5 310 aa12.1□□□□□ -0.47
SREBF1-202ENST00000355815 OIT3Q8WWZ8 545 aa12.1□□□□□ -0.47
SREBF1-202ENST00000355815 GINS3Q9BRX5 216 aa12.1□□□□□ -0.47
SREBF1-202ENST00000355815 TMEM147Q9BVK8 224 aa12.1□□□□□ -0.47
SREBF1-202ENST00000355815 RTL8AQ9BWD3 113 aa12.1□□□□□ -0.47
SREBF1-202ENST00000355815 HTR1DP28221 377 aa12.1□□□□□ -0.47
SREBF1-202ENST00000355815 HOXA6P31267 233 aa12.1□□□□□ -0.47
SREBF1-202ENST00000355815 CCL20P78556 96 aa12.1□□□□□ -0.47
SREBF1-202ENST00000355815 SSX8Q7RTT4 187 aa12.1□□□□□ -0.47
SREBF1-202ENST00000355815 NDUFAF3Q9BU61 184 aa12.1□□□□□ -0.47
SREBF1-202ENST00000355815 RFNGQ9Y644 331 aa12.1□□□□□ -0.47
SREBF1-202ENST00000355815 CT45A10P0DMU9 189 aa12.09□□□□□ -0.47
SREBF1-202ENST00000355815 SELEP16581 610 aa12.09□□□□□ -0.47
SREBF1-202ENST00000355815 ADCYAP1P18509 176 aa12.09□□□□□ -0.47
SREBF1-202ENST00000355815 PPOXP50336 477 aa12.09□□□□□ -0.47
SREBF1-202ENST00000355815 ATP6V1FQ16864 119 aa12.09□□□□□ -0.47
SREBF1-202ENST00000355815 S100A7AQ86SG5 101 aa12.09□□□□□ -0.47
SREBF1-202ENST00000355815 TMEM183AQ8IXX5 376 aa12.09□□□□□ -0.47
SREBF1-202ENST00000355815 MRGPRDQ8TDS7 321 aa12.09□□□□□ -0.47
SREBF1-202ENST00000355815 HSD17B10Q99714 261 aaKnown RBP12.09□□□□□ -0.47
SREBF1-202ENST00000355815 COMMD5Q9GZQ3 224 aa12.09□□□□□ -0.47
SREBF1-202ENST00000355815 MANBALQ9NQG1 85 aa12.09□□□□□ -0.47
SREBF1-202ENST00000355815 ZNF581Q9P0T4 197 aa12.09□□□□□ -0.47
SREBF1-202ENST00000355815 MEOX1P50221 254 aa12.09□□□□□ -0.47
SREBF1-202ENST00000355815 GNB1P62873 340 aa12.09□□□□□ -0.47
SREBF1-202ENST00000355815 FXYD3Q14802 87 aa12.09□□□□□ -0.47
SREBF1-202ENST00000355815 FAM27BQ5VT28 67 aa12.09□□□□□ -0.47
SREBF1-202ENST00000355815 TUBD1Q9UJT1 453 aa12.09□□□□□ -0.47
SREBF1-202ENST00000355815 VCANP13611 3396 aa12.09□□□□□ -0.47
SREBF1-202ENST00000355815 SPEGQ15772 3267 aa12.09□□□□□ -0.47
SREBF1-202ENST00000355815 SLC22A20A6NK97 555 aa12.09□□□□□ -0.47
SREBF1-202ENST00000355815 COX7A2P2O60397 106 aa12.09□□□□□ -0.47
SREBF1-202ENST00000355815 NEURL1O76050 574 aa12.09□□□□□ -0.47
SREBF1-202ENST00000355815 SSPNQ14714 243 aa12.09□□□□□ -0.47
SREBF1-202ENST00000355815 OR4C12Q96R67 309 aa12.09□□□□□ -0.47
SREBF1-202ENST00000355815 MRPL13Q9BYD1 178 aaKnown RBP12.09□□□□□ -0.47
SREBF1-202ENST00000355815 OBSL1O75147 1896 aa12.09□□□□□ -0.47
SREBF1-202ENST00000355815 CUL9Q8IWT3 2517 aa12.09□□□□□ -0.47
SREBF1-202ENST00000355815 IGKV1D-8A0A087WSZ0 117 aa12.08□□□□□ -0.47
SREBF1-202ENST00000355815 FCGR3AP08637 254 aa12.08□□□□□ -0.47
SREBF1-202ENST00000355815 SCTP09683 121 aa12.08□□□□□ -0.47
SREBF1-202ENST00000355815 DEFA4P12838 97 aa12.08□□□□□ -0.47
SREBF1-202ENST00000355815 IGFBP3P17936 291 aaPredicted RBP12.08□□□□□ -0.47
SREBF1-202ENST00000355815 BRS3P32247 399 aa12.08□□□□□ -0.47
SREBF1-202ENST00000355815 PARLQ9H300 379 aa12.08□□□□□ -0.47
SREBF1-202ENST00000355815 POLDIP2Q9Y2S7 368 aa12.08□□□□□ -0.47
SREBF1-202ENST00000355815 C2orf16Q68DN1 1984 aa12.08□□□□□ -0.48
SREBF1-202ENST00000355815 ASPHD2Q6ICH7 369 aa12.08□□□□□ -0.48
SREBF1-202ENST00000355815 TPRX1Q8N7U7 411 aa12.08□□□□□ -0.48
SREBF1-202ENST00000355815 BMPERQ8N8U9 685 aa12.08□□□□□ -0.48
SREBF1-202ENST00000355815 OR1L4Q8NGR5 311 aa12.08□□□□□ -0.48
SREBF1-202ENST00000355815 TRAV38-1A0A0B4J264 116 aa12.08□□□□□ -0.48
SREBF1-202ENST00000355815 CDIPTO14735 213 aa12.08□□□□□ -0.48
SREBF1-202ENST00000355815 GALR2O43603 387 aaPredicted RBP12.08□□□□□ -0.48
SREBF1-202ENST00000355815 SNAI2O43623 268 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms