RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 MMD2Q8IY49 270 aa12.87□□□□□ -0.35
LMX1B-201ENST00000355497 PARLQ9H300 379 aa12.87□□□□□ -0.35
LMX1B-201ENST00000355497 KCNK7Q9Y2U2 307 aa12.87□□□□□ -0.35
LMX1B-201ENST00000355497 C7orf71A4D174 169 aa12.87□□□□□ -0.35
LMX1B-201ENST00000355497 HLA-DRB1P01911 266 aa12.87□□□□□ -0.35
LMX1B-201ENST00000355497 HKR1P10072 659 aa12.87□□□□□ -0.35
LMX1B-201ENST00000355497 ZNF658BQ4V348 819 aaPredicted RBP12.87□□□□□ -0.35
LMX1B-201ENST00000355497 FAM27BQ5VT28 67 aa12.87□□□□□ -0.35
LMX1B-201ENST00000355497 MIC13Q5XKP0 118 aa12.87□□□□□ -0.35
LMX1B-201ENST00000355497 A0A1W2PPV9 198 aa12.87□□□□□ -0.35
LMX1B-201ENST00000355497 FCGR2BP31994 310 aaPredicted RBP12.87□□□□□ -0.35
LMX1B-201ENST00000355497 OTX1P32242 354 aaPredicted RBP12.87□□□□□ -0.35
LMX1B-201ENST00000355497 PSG4Q00888 419 aa12.87□□□□□ -0.35
LMX1B-201ENST00000355497 UNQ5815/PRO19632Q6UWF5 114 aa12.87□□□□□ -0.35
LMX1B-201ENST00000355497 RHOVQ96L33 236 aa12.87□□□□□ -0.35
LMX1B-201ENST00000355497 C11orf68Q9H3H3 251 aaKnown RBP12.87□□□□□ -0.35
LMX1B-201ENST00000355497 A0A0B4J293 547 aa12.87□□□□□ -0.35
LMX1B-201ENST00000355497 UPK3AO75631 287 aa12.87□□□□□ -0.35
LMX1B-201ENST00000355497 IL4P05112 153 aa12.87□□□□□ -0.35
LMX1B-201ENST00000355497 LEMD1Q68G75 181 aa12.87□□□□□ -0.35
LMX1B-201ENST00000355497 LAMTOR1Q6IAA8 161 aa12.87□□□□□ -0.35
LMX1B-201ENST00000355497 CLEC2AQ6UVW9 174 aa12.87□□□□□ -0.35
LMX1B-201ENST00000355497 OR10AG1Q8NH19 301 aa12.87□□□□□ -0.35
LMX1B-201ENST00000355497 TAF15Q92804 592 aaKnown RBP eCLIP12.87□□□□□ -0.35
LMX1B-201ENST00000355497 TRAV30A0A087WSZ9 112 aa12.86□□□□□ -0.35
LMX1B-201ENST00000355497 TRBV5-3A0A0A0MS03 114 aa12.86□□□□□ -0.35
LMX1B-201ENST00000355497 CDX1P47902 265 aaPredicted RBP12.86□□□□□ -0.35
LMX1B-201ENST00000355497 ZNF506Q5JVG8 444 aa12.86□□□□□ -0.35
LMX1B-201ENST00000355497 SHISA5Q8N114 240 aa12.86□□□□□ -0.35
LMX1B-201ENST00000355497 SLC25A17O43808 307 aa12.86□□□□□ -0.35
LMX1B-201ENST00000355497 ZFP36L2P47974 494 aaKnown RBP12.86□□□□□ -0.35
LMX1B-201ENST00000355497 MFAP4P55083 255 aa12.86□□□□□ -0.35
LMX1B-201ENST00000355497 FXYD3Q14802 87 aa12.86□□□□□ -0.35
LMX1B-201ENST00000355497 PGPEP1Q9NXJ5 209 aa12.86□□□□□ -0.35
LMX1B-201ENST00000355497 ZCCHC14Q8WYQ9 949 aaKnown RBP12.86□□□□□ -0.35
LMX1B-201ENST00000355497 NEU1Q99519 415 aa12.86□□□□□ -0.35
LMX1B-201ENST00000355497 LAMA4Q16363 1823 aa12.86□□□□□ -0.35
LMX1B-201ENST00000355497 SOD3P08294 240 aa12.86□□□□□ -0.35
LMX1B-201ENST00000355497 SCTP09683 121 aa12.86□□□□□ -0.35
LMX1B-201ENST00000355497 FCARP24071 287 aa12.86□□□□□ -0.35
LMX1B-201ENST00000355497 OPN3Q9H1Y3 402 aaPredicted RBP12.86□□□□□ -0.35
LMX1B-201ENST00000355497 AHDC1Q5TGY3 1603 aaPredicted RBP12.86□□□□□ -0.35
LMX1B-201ENST00000355497 SHROOM3Q8TF72 1996 aa12.86□□□□□ -0.35
LMX1B-201ENST00000355497 hCG_38984A0A1B0GV85 526 aa12.86□□□□□ -0.35
LMX1B-201ENST00000355497 MS4A3Q96HJ5 214 aa12.86□□□□□ -0.35
LMX1B-201ENST00000355497 IGKV3OR2-268A0A0C4DH90 116 aa12.85□□□□□ -0.35
LMX1B-201ENST00000355497 PGLYRP1O75594 196 aaPredicted RBP12.85□□□□□ -0.35
LMX1B-201ENST00000355497 SFTPCP11686 197 aa12.85□□□□□ -0.35
LMX1B-201ENST00000355497 MPV17P39210 176 aa12.85□□□□□ -0.35
LMX1B-201ENST00000355497 RND2P52198 227 aa12.85□□□□□ -0.35
LMX1B-201ENST00000355497 FAM209AQ5JX71 171 aa12.85□□□□□ -0.35
LMX1B-201ENST00000355497 SELENOHQ8IZQ5 122 aaKnown RBP12.85□□□□□ -0.35
LMX1B-201ENST00000355497 IDI2-AS1Q9NZ38 188 aa12.85□□□□□ -0.35
LMX1B-201ENST00000355497 PDE4DIPQ5VU43 2346 aa12.85□□□□□ -0.35
LMX1B-201ENST00000355497 SLC25A53Q5H9E4 307 aa12.85□□□□□ -0.35
LMX1B-201ENST00000355497 TCF24Q7RTU0 167 aa12.85□□□□□ -0.35
LMX1B-201ENST00000355497 SRSF12Q8WXF0 261 aaKnown RBP12.85□□□□□ -0.35
LMX1B-201ENST00000355497 DTX4Q9Y2E6 619 aa12.85□□□□□ -0.35
LMX1B-201ENST00000355497 SMIM13P0DJ93 91 aa12.85□□□□□ -0.35
LMX1B-201ENST00000355497 SRIP30626 198 aa12.85□□□□□ -0.35
LMX1B-201ENST00000355497 FAM169BQ8N8A8 192 aa12.85□□□□□ -0.35
LMX1B-201ENST00000355497 OR52M1Q8NGK5 317 aa12.85□□□□□ -0.35
LMX1B-201ENST00000355497 SPAG8Q99932 426 aaPredicted RBP12.85□□□□□ -0.35
LMX1B-201ENST00000355497 WNT5BQ9H1J7 359 aa12.85□□□□□ -0.35
LMX1B-201ENST00000355497 CCL27Q9Y4X3 112 aa12.85□□□□□ -0.35
LMX1B-201ENST00000355497 ADAMTSL3P82987 1691 aa12.85□□□□□ -0.35
LMX1B-201ENST00000355497 DDTP30046 118 aa12.85□□□□□ -0.35
LMX1B-201ENST00000355497 A0A1B0GV72 72 aa12.84□□□□□ -0.35
LMX1B-201ENST00000355497 ARL14EPLP0DKL9 152 aa12.84□□□□□ -0.35
LMX1B-201ENST00000355497 TNFSF10P50591 281 aa12.84□□□□□ -0.35
LMX1B-201ENST00000355497 FAM106AQ4KMX7 169 aa12.84□□□□□ -0.35
LMX1B-201ENST00000355497 GEMIN7Q9H840 131 aaKnown RBP12.84□□□□□ -0.35
LMX1B-201ENST00000355497 ASAH2BP0C7U1 165 aa12.84□□□□□ -0.35
LMX1B-201ENST00000355497 FAM209BQ5JX69 171 aa12.84□□□□□ -0.35
LMX1B-201ENST00000355497 PUSL1Q8N0Z8 303 aaKnown RBP12.84□□□□□ -0.35
LMX1B-201ENST00000355497 QTRT1Q9BXR0 403 aaKnown RBP12.84□□□□□ -0.35
LMX1B-201ENST00000355497 OR51M1Q9H341 326 aa12.84□□□□□ -0.35
LMX1B-201ENST00000355497 DNAJC4Q9NNZ3 241 aa12.84□□□□□ -0.35
LMX1B-201ENST00000355497 FAM90A10PA6NDY2 464 aa12.84□□□□□ -0.35
LMX1B-201ENST00000355497 FAM90A18PA6NE21 464 aa12.84□□□□□ -0.35
LMX1B-201ENST00000355497 FAM90A16PA6NEW6 464 aa12.84□□□□□ -0.35
LMX1B-201ENST00000355497 FAM90A20PA6NIJ5 464 aa12.84□□□□□ -0.35
LMX1B-201ENST00000355497 FAM90A8PA6NJQ4 464 aa12.84□□□□□ -0.35
LMX1B-201ENST00000355497 FAM90A7PA6NKC0 464 aa12.84□□□□□ -0.35
LMX1B-201ENST00000355497 FAM90A22PA8MWA6 464 aa12.84□□□□□ -0.35
LMX1B-201ENST00000355497 FAM90A12PA8MX19 464 aa12.84□□□□□ -0.35
LMX1B-201ENST00000355497 FAM90A5PA8MXJ8 464 aa12.84□□□□□ -0.35
LMX1B-201ENST00000355497 FAM90A23PA8MXZ1 464 aa12.84□□□□□ -0.35
LMX1B-201ENST00000355497 FAM90A15PP0C7V4 464 aa12.84□□□□□ -0.35
LMX1B-201ENST00000355497 FAM90A13PP0C7W8 464 aa12.84□□□□□ -0.35
LMX1B-201ENST00000355497 FAM90A14PP0C7W9 464 aa12.84□□□□□ -0.35
LMX1B-201ENST00000355497 FAM90A24PP0C7X0 464 aa12.84□□□□□ -0.35
LMX1B-201ENST00000355497 TRGC1P0CF51 173 aa12.84□□□□□ -0.35
LMX1B-201ENST00000355497 RFLNBQ8N5W9 214 aa12.84□□□□□ -0.35
LMX1B-201ENST00000355497 OR4D5Q8NGN0 318 aa12.84□□□□□ -0.35
LMX1B-201ENST00000355497 DUX5Q96PT3 197 aa12.84□□□□□ -0.35
LMX1B-201ENST00000355497 ATP5G2Q06055 141 aa12.84□□□□□ -0.35
LMX1B-201ENST00000355497 ZNF56Q15929 161 aa12.84□□□□□ -0.35
LMX1B-201ENST00000355497 TEX29Q8N6K0 151 aa12.84□□□□□ -0.35
LMX1B-201ENST00000355497 GPR146Q96CH1 333 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms