RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 MC5RP33032 325 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 C1QL3Q5VWW1 255 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 ZNF645Q8N7E2 425 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 NEU1Q99519 415 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 KIF13AQ9H1H9 1805 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 SLC25A17O43808 307 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 CCL3P10147 92 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 ZNF506Q5JVG8 444 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 UCN2Q96RP3 112 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 DMRTA2Q96SC8 542 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 SCN11AQ9UI33 1791 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 NUTF2P61970 127 aaKnown RBP5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 SLX4Q8IY92 1834 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 IGHV5-10-1A0A0J9YXX1 117 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 TFF2Q03403 129 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 ATG4DQ86TL0 474 aaPredicted RBP5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 ST6GAL2Q96JF0 529 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 C7orf77A4D0Y5 90 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 OTX1P32242 354 aaPredicted RBP5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 NPBWR2P48146 333 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 PLPPR5Q32ZL2 321 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 MEGF10Q96KG7 1140 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 CTGFP29279 349 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 ATP5J2P56134 94 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 PQLC2Q6ZP29 291 aa5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 ZNF107Q9UII5 783 aaPredicted RBP5.03□□□□□ -1.6
SRGAP1-201ENST00000355086 SPAARA0A1B0GVQ0 90 aa5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 IGFBP6P24592 240 aaPredicted RBP5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 SERF2P84101 59 aa5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 KIAA2026Q5HYC2 2103 aa5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 OGG1O15527 345 aa5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 HOXD4P09016 255 aaPredicted RBP5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 RPL8P62917 257 aaKnown RBP5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 FAM60AQ9NP50 221 aa5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 LEUTXA8MZ59 168 aa5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 PMCHL1Q16048 86 aa5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 LINC00470Q9BZP3 86 aa5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 SLC6A13Q9NSD5 602 aa5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 IFNL4K9M1U5 179 aa5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 STARD6P59095 220 aa5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 LINC01465Q8N7H1 131 aa5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 A0A1B0GTL3 188 aa5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 CDC42EP2O14613 210 aa5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 IL9P15248 144 aa5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 TMEM229AB2RXF0 380 aa5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 FAM159AQ6UWV7 190 aa5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 OR10AG1Q8NH19 301 aa5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 RNF133Q8WVZ7 376 aa5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 FXYD1O00168 92 aa5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 COL9A1P20849 921 aa5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 EEF1AKMT3Q96AZ1 226 aa5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 TMEM30AQ9NV96 361 aa5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 KIAA1217Q5T5P2 1943 aa5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 IGLV3-16A0A075B6K0 115 aa5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 B4E171 279 aa5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 MT-ND6P03923 174 aa5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 HOXB3P14651 431 aaPredicted RBP5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 RCC1P18754 421 aaPredicted RBP5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 QTRT1Q9BXR0 403 aaKnown RBP5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 PARLQ9H300 379 aa5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 TMEM160Q9NX00 188 aa5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 LOC105371242A0A075B767 164 aa5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 LIFP15018 202 aa5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 FOXB2Q5VYV0 432 aa5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 H1FOOQ8IZA3 346 aaPredicted RBP5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 SRSF12Q8WXF0 261 aaKnown RBP5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 IGF2P01344 180 aa5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 CISD1Q9NZ45 108 aaKnown RBP5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 MESTQ5EB52 335 aa5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 MRPL16Q9NX20 251 aaKnown RBP5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 UQCR10Q9UDW1 63 aa5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 MTCL1Q9Y4B5 1905 aaKnown RBP5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 RGPD5Q99666 1765 aa5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 TRAV30A0A087WSZ9 112 aa5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 SLC25A20O43772 301 aa5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 DMKNQ6E0U4 476 aaPredicted RBP5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 NTN1O95631 604 aa5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 MTURNQ8N3F0 131 aa5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 GCSAMQ8N6F7 178 aa5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 ZCCHC14Q8WYQ9 949 aaKnown RBP5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 PARD6GQ9BYG4 376 aaPredicted RBP5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 ZNF430Q9H8G1 570 aaPredicted RBP5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 C9JCJ5 164 aa5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 BCL2P10415 239 aa5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 MMD2Q8IY49 270 aa5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 STPG2Q8N412 459 aa5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 CYB561D1Q8N8Q1 229 aa5.02□□□□□ -1.61
SRGAP1-201ENST00000355086 CFDP00746 253 aaPredicted RBP5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 UCP2P55851 309 aa5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 EDIL3O43854 480 aa5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 ZNF324BQ6AW86 544 aaPredicted RBP5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 TRAF4Q9BUZ4 470 aaPredicted RBP5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 MARVELD3Q96A59 401 aa5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 HLA-DRB1P01911 266 aa5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 AMY1AP04745 511 aa5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 TPRX1Q8N7U7 411 aa5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 FAM169BQ8N8A8 192 aa5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 CACNA1SQ13698 1873 aa5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 SPOCK3Q9BQ16 436 aa5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 PMCHL2Q9BQD1 86 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms