RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 M0R1W7 72 aa12.76□□□□□ -0.37
CTSA-202ENST00000354880 ENSAO43768 121 aaKnown RBP12.76□□□□□ -0.37
CTSA-202ENST00000354880 ADAP1O75689 374 aa12.76□□□□□ -0.37
CTSA-202ENST00000354880 HOXB5P09067 269 aa12.76□□□□□ -0.37
CTSA-202ENST00000354880 GIPP09681 153 aaPredicted RBP12.76□□□□□ -0.37
CTSA-202ENST00000354880 SAA2P0DJI9 122 aaPredicted RBP12.76□□□□□ -0.37
CTSA-202ENST00000354880 ZNF16P17020 682 aaPredicted RBP12.76□□□□□ -0.37
CTSA-202ENST00000354880 ARF6P62330 175 aa12.76□□□□□ -0.37
CTSA-202ENST00000354880 RPL39P5Q59GN2 51 aa12.76□□□□□ -0.37
CTSA-202ENST00000354880 ODF3L1Q8IXM7 274 aa12.76□□□□□ -0.37
CTSA-202ENST00000354880 ABHD12Q8N2K0 398 aa12.76□□□□□ -0.37
CTSA-202ENST00000354880 LHFPL5Q8TAF8 219 aa12.76□□□□□ -0.37
CTSA-202ENST00000354880 TMEM56Q96MV1 263 aa12.76□□□□□ -0.37
CTSA-202ENST00000354880 METTL8Q9H825 291 aaKnown RBP12.76□□□□□ -0.37
CTSA-202ENST00000354880 TMEM56-RWDD3S4R434 201 aa12.76□□□□□ -0.37
CTSA-202ENST00000354880 WNK2Q9Y3S1 2297 aa12.75□□□□□ -0.37
CTSA-202ENST00000354880 J3QR06 171 aa12.75□□□□□ -0.37
CTSA-202ENST00000354880 FOXH1O75593 365 aa12.75□□□□□ -0.37
CTSA-202ENST00000354880 CDS2O95674 445 aa12.75□□□□□ -0.37
CTSA-202ENST00000354880 SERPINE2P07093 398 aa12.75□□□□□ -0.37
CTSA-202ENST00000354880 RPL30P62888 115 aaKnown RBP12.75□□□□□ -0.37
CTSA-202ENST00000354880 LRRC75A-AS1Q8N1F1 130 aa12.75□□□□□ -0.37
CTSA-202ENST00000354880 LINC00311Q8N616 119 aa12.75□□□□□ -0.37
CTSA-202ENST00000354880 Q8N7P7 452 aa12.75□□□□□ -0.37
CTSA-202ENST00000354880 OR9G1Q8NH87 305 aa12.75□□□□□ -0.37
CTSA-202ENST00000354880 ZNF596Q8TC21 504 aa12.75□□□□□ -0.37
CTSA-202ENST00000354880 ZNRD1Q9P1U0 126 aa12.75□□□□□ -0.37
CTSA-202ENST00000354880 CSMD1Q96PZ7 3565 aa12.75□□□□□ -0.37
CTSA-202ENST00000354880 M0R1X1 148 aa12.74□□□□□ -0.37
CTSA-202ENST00000354880 SLC25A16P16260 332 aa12.74□□□□□ -0.37
CTSA-202ENST00000354880 DUTP33316 252 aaKnown RBP12.74□□□□□ -0.37
CTSA-202ENST00000354880 RAP2BP61225 183 aa12.74□□□□□ -0.37
CTSA-202ENST00000354880 PAX2Q02962 417 aa12.74□□□□□ -0.37
CTSA-202ENST00000354880 TMEM268Q5VZI3 342 aa12.74□□□□□ -0.37
CTSA-202ENST00000354880 GSG1LQ6UXU4 331 aa12.74□□□□□ -0.37
CTSA-202ENST00000354880 ZNF695Q8IW36 515 aa12.74□□□□□ -0.37
CTSA-202ENST00000354880 KIR3DL3Q8N743 410 aa12.74□□□□□ -0.37
CTSA-202ENST00000354880 OR10X1Q8NGY0 326 aa12.74□□□□□ -0.37
CTSA-202ENST00000354880 TCTEX1D2Q8WW35 142 aa12.74□□□□□ -0.37
CTSA-202ENST00000354880 ASB13Q8WXK3 278 aa12.74□□□□□ -0.37
CTSA-202ENST00000354880 C18orf12Q96KH6 178 aa12.74□□□□□ -0.37
CTSA-202ENST00000354880 PDCD10Q9BUL8 212 aa12.74□□□□□ -0.37
CTSA-202ENST00000354880 IGHV2-26A0A0B4J1V2 119 aa12.74□□□□□ -0.37
CTSA-202ENST00000354880 IGHV2-70DA0A0C4DH43 119 aa12.74□□□□□ -0.37
CTSA-202ENST00000354880 C13orf42A0A1B0GVH6 325 aa12.74□□□□□ -0.37
CTSA-202ENST00000354880 C5orf51A6NDU8 294 aa12.74□□□□□ -0.37
CTSA-202ENST00000354880 LINC00473A8K010 186 aa12.74□□□□□ -0.37
CTSA-202ENST00000354880 IFNA21P01568 189 aa12.74□□□□□ -0.37
CTSA-202ENST00000354880 DLX1P56177 255 aa12.74□□□□□ -0.37
CTSA-202ENST00000354880 ZFP69Q49AA0 526 aa12.74□□□□□ -0.37
CTSA-202ENST00000354880 C1orf229Q6ZS94 237 aaPredicted RBP12.74□□□□□ -0.37
CTSA-202ENST00000354880 C1orf122Q6ZSJ8 110 aa12.74□□□□□ -0.37
CTSA-202ENST00000354880 LYZL2Q7Z4W2 148 aa12.74□□□□□ -0.37
CTSA-202ENST00000354880 TCTEX1D1Q8N7M0 179 aa12.74□□□□□ -0.37
CTSA-202ENST00000354880 OR2T35Q8NGX2 323 aa12.74□□□□□ -0.37
CTSA-202ENST00000354880 RBPMSQ93062 196 aaKnown RBP12.74□□□□□ -0.37
CTSA-202ENST00000354880 IL22RA2Q969J5 263 aa12.74□□□□□ -0.37
CTSA-202ENST00000354880 WDR89Q96FK6 387 aaPredicted RBP12.74□□□□□ -0.37
CTSA-202ENST00000354880 SEC22AQ96IW7 307 aa12.74□□□□□ -0.37
CTSA-202ENST00000354880 S1PR3Q99500 378 aa12.74□□□□□ -0.37
CTSA-202ENST00000354880 ZNF251Q9BRH9 671 aa12.74□□□□□ -0.37
CTSA-202ENST00000354880 FAM157AC9JC47 383 aa12.73□□□□□ -0.37
CTSA-202ENST00000354880 SMLR1H3BR10 107 aa12.73□□□□□ -0.37
CTSA-202ENST00000354880 TOR1AO14656 332 aa12.73□□□□□ -0.37
CTSA-202ENST00000354880 LINC00205P59089 165 aa12.73□□□□□ -0.37
CTSA-202ENST00000354880 GGNBP1Q5YKI7 109 aa12.73□□□□□ -0.37
CTSA-202ENST00000354880 SELENOHQ8IZQ5 122 aaKnown RBP12.73□□□□□ -0.37
CTSA-202ENST00000354880 SLC35G3Q8N808 338 aa12.73□□□□□ -0.37
CTSA-202ENST00000354880 DRAXINQ8NBI3 349 aaPredicted RBP12.73□□□□□ -0.37
CTSA-202ENST00000354880 TNFRSF14Q92956 283 aa12.73□□□□□ -0.37
CTSA-202ENST00000354880 MBD6Q96DN6 1003 aa12.73□□□□□ -0.37
CTSA-202ENST00000354880 CLEC7AQ9BXN2 247 aa12.73□□□□□ -0.37
CTSA-202ENST00000354880 MMP26Q9NRE1 261 aa12.73□□□□□ -0.37
CTSA-202ENST00000354880 FAM212BQ9NTI7 297 aaPredicted RBP12.73□□□□□ -0.37
CTSA-202ENST00000354880 POLR3KQ9Y2Y1 108 aaPredicted RBP12.73□□□□□ -0.37
CTSA-202ENST00000354880 TMED3Q9Y3Q3 217 aa12.73□□□□□ -0.37
CTSA-202ENST00000354880 KPTNQ9Y664 436 aa12.73□□□□□ -0.37
CTSA-202ENST00000354880 SVEP1Q4LDE5 3571 aa12.73□□□□□ -0.37
CTSA-202ENST00000354880 PIGBOS1A0A0B4J2F0 54 aa12.72□□□□□ -0.37
CTSA-202ENST00000354880 DUXBA0A1W2PPF3 345 aa12.72□□□□□ -0.37
CTSA-202ENST00000354880 MPTX1A8MV57 137 aa12.72□□□□□ -0.37
CTSA-202ENST00000354880 C1QBP02746 253 aa12.72□□□□□ -0.37
CTSA-202ENST00000354880 PRTN3P24158 256 aa12.72□□□□□ -0.37
CTSA-202ENST00000354880 SRSF4Q08170 494 aaKnown RBP12.72□□□□□ -0.37
CTSA-202ENST00000354880 ZNF585BQ52M93 769 aa12.72□□□□□ -0.37
CTSA-202ENST00000354880 NCR3LG1Q68D85 454 aa12.72□□□□□ -0.37
CTSA-202ENST00000354880 SPAG16Q8N0X2 631 aa12.72□□□□□ -0.37
CTSA-202ENST00000354880 OR13D1Q8NGV5 346 aa12.72□□□□□ -0.37
CTSA-202ENST00000354880 SIRT7Q9NRC8 400 aa12.72□□□□□ -0.37
CTSA-202ENST00000354880 UNC79Q9P2D8 2635 aa12.72□□□□□ -0.37
CTSA-202ENST00000354880 ABCA2Q9BZC7 2435 aa12.72□□□□□ -0.37
CTSA-202ENST00000354880 IGLV1-47P01700 117 aa12.72□□□□□ -0.37
CTSA-202ENST00000354880 RPA2P15927 270 aa12.72□□□□□ -0.37
CTSA-202ENST00000354880 USF1P22415 310 aaPredicted RBP12.72□□□□□ -0.37
CTSA-202ENST00000354880 PRRX1P54821 245 aa12.72□□□□□ -0.37
CTSA-202ENST00000354880 BRWD1-AS2P59051 145 aa12.72□□□□□ -0.37
CTSA-202ENST00000354880 PRB3Q04118 309 aaPredicted RBP12.72□□□□□ -0.37
CTSA-202ENST00000354880 OR2B11Q5JQS5 317 aa12.72□□□□□ -0.37
CTSA-202ENST00000354880 TMEM186Q96B77 213 aa12.72□□□□□ -0.37
CTSA-202ENST00000354880 OR10C1Q96KK4 312 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms