RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 DOT1LQ8TEK3 1739 aa7.04□□□□□ -1.28
SCN8A-201ENST00000354534 LTBP3Q9NS15 1303 aa7.04□□□□□ -1.28
SCN8A-201ENST00000354534 PGPEP1LA6NFU8 196 aa7.04□□□□□ -1.28
SCN8A-201ENST00000354534 A8MWV9 139 aa7.04□□□□□ -1.28
SCN8A-201ENST00000354534 BGLAPP02818 100 aa7.04□□□□□ -1.28
SCN8A-201ENST00000354534 KLK2P20151 261 aa7.04□□□□□ -1.28
SCN8A-201ENST00000354534 LINC00518Q8N0U6 118 aa7.04□□□□□ -1.28
SCN8A-201ENST00000354534 C1orf43Q9BWL3 253 aa7.04□□□□□ -1.28
SCN8A-201ENST00000354534 FAM159AQ6UWV7 190 aa7.04□□□□□ -1.28
SCN8A-201ENST00000354534 WNT2BQ93097 391 aa7.04□□□□□ -1.28
SCN8A-201ENST00000354534 LRP6O75581 1613 aa7.04□□□□□ -1.28
SCN8A-201ENST00000354534 MYF5P13349 255 aa7.04□□□□□ -1.28
SCN8A-201ENST00000354534 NPPBP16860 134 aa7.04□□□□□ -1.28
SCN8A-201ENST00000354534 RPS20P60866 119 aaKnown RBP7.04□□□□□ -1.28
SCN8A-201ENST00000354534 RNPS1Q15287 305 aaKnown RBP7.04□□□□□ -1.28
SCN8A-201ENST00000354534 C5orf30Q96GV9 206 aa7.04□□□□□ -1.28
SCN8A-201ENST00000354534 CST9LQ9H4G1 147 aa7.04□□□□□ -1.28
SCN8A-201ENST00000354534 NHP2Q9NX24 153 aaKnown RBP7.04□□□□□ -1.28
SCN8A-201ENST00000354534 A0A1W2PS18 150 aa7.04□□□□□ -1.28
SCN8A-201ENST00000354534 NKX2-6A6NCS4 301 aa7.04□□□□□ -1.28
SCN8A-201ENST00000354534 PSG2P11465 335 aa7.04□□□□□ -1.28
SCN8A-201ENST00000354534 TMEM50BP56557 158 aa7.04□□□□□ -1.28
SCN8A-201ENST00000354534 IDSB3KWA1 339 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 TNFSF14O43557 240 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 BCL2P10415 239 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 ASCL5Q7RTU5 278 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 C4orf45Q96LM5 186 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 DUX5Q96PT3 197 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 A0A087WUJ7 227 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 VWC2LB2RUY7 222 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 CRPP02741 224 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 SCAND1P57086 179 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 DEFB103AP81534 67 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 C5orf47Q569G3 176 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 LYZL2Q7Z4W2 148 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 C9JCJ5 164 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 VSIG10L2P0DP72 767 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 SSBP2P81877 361 aaPredicted RBP7.03□□□□□ -1.28
SCN8A-201ENST00000354534 MESTQ5EB52 335 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 OR10W1Q8NGF6 305 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 SCN5AQ14524 2016 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 TRGV5A0A0B4J1U4 118 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 TRAV2A0A0B4J234 112 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 REG1BP48304 166 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 TIMM23BQ5SRD1 257 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 C9orf153Q5TBE3 101 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 PDXPQ96GD0 296 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 CLPSL1A2RUU4 121 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 EML2O95834 649 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 C1QTNF12Q5T7M4 302 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 CA10Q9NS85 328 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 ABCA4P78363 2273 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 CTSVO60911 334 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 SELENOTP62341 195 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 C9orf62Q8N4C0 152 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 TMEM45BQ96B21 275 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 GTSF1LQ9H1H1 148 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 MTCH2Q9Y6C9 303 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 ANKRD36A6QL64 1941 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 DHHO43323 396 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 PLPP2O43688 288 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 VDAC1P21796 283 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 MORN4Q8NDC4 146 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 SLC37A2Q8TED4 501 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 LAMTOR3Q9UHA4 124 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 LINC01387J3KSC0 135 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 CD300CQ08708 224 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 ZNF774Q6NX45 483 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 LILRA3Q8N6C8 439 aaPredicted RBP7.03□□□□□ -1.28
SCN8A-201ENST00000354534 STPG3Q8N7X2 389 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 HMGCLL1Q8TB92 370 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 SPSB4Q96A44 273 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 NABP2Q9BQ15 211 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 FSCN3Q9NQT6 498 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 EFNB2P52799 333 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 CCSMST1Q4G0I0 132 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 C16orf52Q8NHV5 167 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 RHNO1Q9BSD3 238 aa7.03□□□□□ -1.28
SCN8A-201ENST00000354534 KLK10O43240 276 aa7.02□□□□□ -1.28
SCN8A-201ENST00000354534 LAMTOR1Q6IAA8 161 aa7.02□□□□□ -1.28
SCN8A-201ENST00000354534 OR11G2Q8NGC1 345 aa7.02□□□□□ -1.28
SCN8A-201ENST00000354534 PTPMT1Q8WUK0 201 aaPredicted RBP7.02□□□□□ -1.28
SCN8A-201ENST00000354534 DOCK2Q92608 1830 aa7.02□□□□□ -1.29
SCN8A-201ENST00000354534 TRAV5A0A0B4J249 113 aa7.02□□□□□ -1.29
SCN8A-201ENST00000354534 MKRN2OSH3BPM6 223 aa7.02□□□□□ -1.29
SCN8A-201ENST00000354534 ARL14EPLP0DKL9 152 aa7.02□□□□□ -1.29
SCN8A-201ENST00000354534 CRYBB2P43320 205 aa7.02□□□□□ -1.29
SCN8A-201ENST00000354534 OR10J3Q5JRS4 329 aa7.02□□□□□ -1.29
SCN8A-201ENST00000354534 TMEM174Q8WUU8 243 aa7.02□□□□□ -1.29
SCN8A-201ENST00000354534 MS4A6EQ96DS6 147 aa7.02□□□□□ -1.29
SCN8A-201ENST00000354534 DXOO77932 396 aaKnown RBP7.02□□□□□ -1.29
SCN8A-201ENST00000354534 CTSDP07339 412 aaPredicted RBP7.02□□□□□ -1.29
SCN8A-201ENST00000354534 SPNS2Q8IVW8 549 aa7.02□□□□□ -1.29
SCN8A-201ENST00000354534 SVIPQ8NHG7 77 aa7.02□□□□□ -1.29
SCN8A-201ENST00000354534 RAX2Q96IS3 184 aa7.02□□□□□ -1.29
SCN8A-201ENST00000354534 SCNM1Q9BWG6 230 aa7.02□□□□□ -1.29
SCN8A-201ENST00000354534 DAPP1Q9UN19 280 aa7.02□□□□□ -1.29
SCN8A-201ENST00000354534 CACNA1EQ15878 2313 aa7.02□□□□□ -1.29
SCN8A-201ENST00000354534 C7orf66A4D0T2 115 aa7.02□□□□□ -1.29
SCN8A-201ENST00000354534 TARM1B6A8C7 271 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms