RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 GPR27Q9NS67 375 aa12.05□□□□□ -0.48
RLIM-202ENST00000349225 UQCR10Q9UDW1 63 aa12.05□□□□□ -0.48
RLIM-202ENST00000349225 hCG_38984A0A1B0GV85 526 aa12.04□□□□□ -0.48
RLIM-202ENST00000349225 PMS2P5A8MQ11 134 aa12.04□□□□□ -0.48
RLIM-202ENST00000349225 DHHO43323 396 aa12.04□□□□□ -0.48
RLIM-202ENST00000349225 CBR3O75828 277 aa12.04□□□□□ -0.48
RLIM-202ENST00000349225 SPINK2P20155 84 aa12.04□□□□□ -0.48
RLIM-202ENST00000349225 HLA-BQ31612 363 aa12.04□□□□□ -0.48
RLIM-202ENST00000349225 RDH5Q92781 318 aa12.04□□□□□ -0.48
RLIM-202ENST00000349225 KLHDC7BQ96G42 594 aa12.04□□□□□ -0.48
RLIM-202ENST00000349225 GSX1Q9H4S2 264 aaPredicted RBP12.04□□□□□ -0.48
RLIM-202ENST00000349225 TP73-AS1Q9UF72 201 aa12.04□□□□□ -0.48
RLIM-202ENST00000349225 ERRFI1Q9UJM3 462 aaPredicted RBP12.04□□□□□ -0.48
RLIM-202ENST00000349225 CD300LBA8K4G0 201 aa12.04□□□□□ -0.48
RLIM-202ENST00000349225 A8MXE2 369 aa12.04□□□□□ -0.48
RLIM-202ENST00000349225 NTF4P34130 210 aa12.04□□□□□ -0.48
RLIM-202ENST00000349225 OR1D5P58170 312 aa12.04□□□□□ -0.48
RLIM-202ENST00000349225 RHBDD2Q6NTF9 364 aa12.04□□□□□ -0.48
RLIM-202ENST00000349225 BAGE3Q86Y29 109 aa12.04□□□□□ -0.48
RLIM-202ENST00000349225 BAGE2Q86Y30 109 aa12.04□□□□□ -0.48
RLIM-202ENST00000349225 ATOH7Q8N100 152 aa12.04□□□□□ -0.48
RLIM-202ENST00000349225 NFAM1Q8NET5 270 aaPredicted RBP12.04□□□□□ -0.48
RLIM-202ENST00000349225 OR1A1Q9P1Q5 309 aa12.04□□□□□ -0.48
RLIM-202ENST00000349225 ATP23Q9Y6H3 246 aa12.04□□□□□ -0.48
RLIM-202ENST00000349225 IGHV2OR16-5A0A0B4J2B6 119 aa12.03□□□□□ -0.48
RLIM-202ENST00000349225 IGHV2-70DA0A0C4DH43 119 aa12.03□□□□□ -0.48
RLIM-202ENST00000349225 TIMP3P35625 211 aa12.03□□□□□ -0.48
RLIM-202ENST00000349225 HNRNPA3P51991 378 aaKnown RBP12.03□□□□□ -0.48
RLIM-202ENST00000349225 FUT6P51993 359 aa12.03□□□□□ -0.48
RLIM-202ENST00000349225 FGFBP3Q8TAT2 258 aa12.03□□□□□ -0.48
RLIM-202ENST00000349225 STARD4Q96DR4 205 aa12.03□□□□□ -0.48
RLIM-202ENST00000349225 NRN1Q9NPD7 142 aa12.03□□□□□ -0.48
RLIM-202ENST00000349225 HS3ST3A1Q9Y663 406 aa12.03□□□□□ -0.48
RLIM-202ENST00000349225 K7EN84 100 aa12.03□□□□□ -0.48
RLIM-202ENST00000349225 GUCA1AP43080 201 aaPredicted RBP12.03□□□□□ -0.48
RLIM-202ENST00000349225 SUMO1P63165 101 aaKnown RBP12.03□□□□□ -0.48
RLIM-202ENST00000349225 OCC1Q8TAD7 63 aa12.03□□□□□ -0.48
RLIM-202ENST00000349225 LSM10Q969L4 123 aaKnown RBP12.03□□□□□ -0.48
RLIM-202ENST00000349225 TXN2Q99757 166 aa12.03□□□□□ -0.48
RLIM-202ENST00000349225 RAC1P63000 192 aa12.03□□□□□ -0.48
RLIM-202ENST00000349225 Q0VG73 95 aa12.03□□□□□ -0.48
RLIM-202ENST00000349225 OR10G8Q8NGN5 311 aa12.03□□□□□ -0.48
RLIM-202ENST00000349225 ZPBPQ9BS86 351 aa12.03□□□□□ -0.48
RLIM-202ENST00000349225 STRADBQ9C0K7 418 aa12.03□□□□□ -0.48
RLIM-202ENST00000349225 KRASP01116 189 aa12.02□□□□□ -0.48
RLIM-202ENST00000349225 PPBPP02775 128 aa12.02□□□□□ -0.48
RLIM-202ENST00000349225 TSPOP30536 169 aa12.02□□□□□ -0.48
RLIM-202ENST00000349225 FASLGP48023 281 aa12.02□□□□□ -0.48
RLIM-202ENST00000349225 MORN2Q502X0 79 aa12.02□□□□□ -0.48
RLIM-202ENST00000349225 ZIC4Q8N9L1 334 aa12.02□□□□□ -0.48
RLIM-202ENST00000349225 NPCDR1Q9BY65 106 aa12.02□□□□□ -0.48
RLIM-202ENST00000349225 RNF24Q9Y225 148 aa12.02□□□□□ -0.48
RLIM-202ENST00000349225 OR2W1Q9Y3N9 320 aa12.02□□□□□ -0.48
RLIM-202ENST00000349225 CELSR3Q9NYQ7 3312 aa12.02□□□□□ -0.48
RLIM-202ENST00000349225 TRAV38-1A0A0B4J264 116 aa12.02□□□□□ -0.49
RLIM-202ENST00000349225 C10orf142B7Z368 130 aa12.02□□□□□ -0.49
RLIM-202ENST00000349225 GDF9O60383 454 aa12.02□□□□□ -0.49
RLIM-202ENST00000349225 SRSF7Q16629 238 aaKnown RBP eCLIP12.02□□□□□ -0.49
RLIM-202ENST00000349225 FBLN7Q53RD9 439 aa12.02□□□□□ -0.49
RLIM-202ENST00000349225 Q8NFD4 153 aa12.02□□□□□ -0.49
RLIM-202ENST00000349225 PPP1R3CQ9UQK1 317 aa12.02□□□□□ -0.49
RLIM-202ENST00000349225 IER3P46695 156 aa12.02□□□□□ -0.49
RLIM-202ENST00000349225 CARD18P57730 90 aa12.02□□□□□ -0.49
RLIM-202ENST00000349225 SIGLECL1Q8N7X8 197 aa12.02□□□□□ -0.49
RLIM-202ENST00000349225 KCNE4Q8WWG9 221 aa12.02□□□□□ -0.49
RLIM-202ENST00000349225 RNF208Q9H0X6 261 aa12.02□□□□□ -0.49
RLIM-202ENST00000349225 A0A1W2PS18 150 aa12.01□□□□□ -0.49
RLIM-202ENST00000349225 TLX3O43711 291 aaPredicted RBP12.01□□□□□ -0.49
RLIM-202ENST00000349225 TIAF1O95411 115 aa12.01□□□□□ -0.49
RLIM-202ENST00000349225 CLDN1O95832 211 aa12.01□□□□□ -0.49
RLIM-202ENST00000349225 CA3P07451 260 aa12.01□□□□□ -0.49
RLIM-202ENST00000349225 ZNF83P51522 516 aa12.01□□□□□ -0.49
RLIM-202ENST00000349225 FAM27BQ5VT28 67 aa12.01□□□□□ -0.49
RLIM-202ENST00000349225 NIT1Q86X76 327 aa12.01□□□□□ -0.49
RLIM-202ENST00000349225 ZNF784Q8NCA9 323 aaPredicted RBP12.01□□□□□ -0.49
RLIM-202ENST00000349225 LOXL4Q96JB6 756 aa12.01□□□□□ -0.49
RLIM-202ENST00000349225 CLN8Q9UBY8 286 aa12.01□□□□□ -0.49
RLIM-202ENST00000349225 CABIN1Q9Y6J0 2220 aa12.01□□□□□ -0.49
RLIM-202ENST00000349225 C3orf79P0CE67 100 aa12.01□□□□□ -0.49
RLIM-202ENST00000349225 ST6GALNAC3Q8NDV1 305 aa12.01□□□□□ -0.49
RLIM-202ENST00000349225 OR2M7Q8NG81 312 aa12.01□□□□□ -0.49
RLIM-202ENST00000349225 A0A1W2PN81 502 aa12.01□□□□□ -0.49
RLIM-202ENST00000349225 F6UZH7 168 aa12.01□□□□□ -0.49
RLIM-202ENST00000349225 FCN1O00602 326 aa12.01□□□□□ -0.49
RLIM-202ENST00000349225 KITLGP21583 273 aa12.01□□□□□ -0.49
RLIM-202ENST00000349225 GFRA1P56159 465 aa12.01□□□□□ -0.49
RLIM-202ENST00000349225 CFHR1Q03591 330 aa12.01□□□□□ -0.49
RLIM-202ENST00000349225 KRTAP27-1Q3LI81 207 aa12.01□□□□□ -0.49
RLIM-202ENST00000349225 FAM69BQ5VUD6 431 aa12.01□□□□□ -0.49
RLIM-202ENST00000349225 VHLLQ6RSH7 139 aa12.01□□□□□ -0.49
RLIM-202ENST00000349225 ZNF738Q8NE65 137 aa12.01□□□□□ -0.49
RLIM-202ENST00000349225 OR1F12Q8NHA8 337 aa12.01□□□□□ -0.49
RLIM-202ENST00000349225 MRGPRDQ8TDS7 321 aa12.01□□□□□ -0.49
RLIM-202ENST00000349225 APOBEC3DQ96AK3 386 aaPredicted RBP12.01□□□□□ -0.49
RLIM-202ENST00000349225 CCDC74BQ96LY2 380 aa12.01□□□□□ -0.49
RLIM-202ENST00000349225 MTCH1Q9NZJ7 389 aa12.01□□□□□ -0.49
RLIM-202ENST00000349225 PRUNE2Q8WUY3 3088 aa12□□□□□ -0.49
RLIM-202ENST00000349225 IGLV3-32A0A0A0MS00 114 aa12□□□□□ -0.49
RLIM-202ENST00000349225 SCO2A0A1W2PP80 73 aa12□□□□□ -0.49
RLIM-202ENST00000349225 KIAA1644Q3SXP7 199 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms