RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 GALNT14Q96FL9 552 aa11.69□□□□□ -0.54
TRIM4-201ENST00000349062 GFOD1Q9NXC2 390 aa11.69□□□□□ -0.54
TRIM4-201ENST00000349062 TGIF2-C20orf24A0A0A6YYL0 155 aa11.68□□□□□ -0.54
TRIM4-201ENST00000349062 IGSF23A1L1A6 192 aa11.68□□□□□ -0.54
TRIM4-201ENST00000349062 RAMP3O60896 148 aa11.68□□□□□ -0.54
TRIM4-201ENST00000349062 TRGC2P03986 189 aa11.68□□□□□ -0.54
TRIM4-201ENST00000349062 G6PCP35575 357 aa11.68□□□□□ -0.54
TRIM4-201ENST00000349062 DUX4L9Q6RFH8 374 aaPredicted RBP11.68□□□□□ -0.54
TRIM4-201ENST00000349062 OR13A1Q8NGR1 328 aa11.68□□□□□ -0.54
TRIM4-201ENST00000349062 ITLN1Q8WWA0 313 aa11.68□□□□□ -0.54
TRIM4-201ENST00000349062 GPR146Q96CH1 333 aa11.68□□□□□ -0.54
TRIM4-201ENST00000349062 PKIBQ9C010 78 aa11.68□□□□□ -0.54
TRIM4-201ENST00000349062 TMED3Q9Y3Q3 217 aa11.68□□□□□ -0.54
TRIM4-201ENST00000349062 HBZP02008 142 aa11.68□□□□□ -0.54
TRIM4-201ENST00000349062 TUBG1P23258 451 aa11.68□□□□□ -0.54
TRIM4-201ENST00000349062 DYNLT3P51808 116 aa11.68□□□□□ -0.54
TRIM4-201ENST00000349062 IL15RAQ13261 267 aa11.68□□□□□ -0.54
TRIM4-201ENST00000349062 Q3ZCU0 254 aa11.68□□□□□ -0.54
TRIM4-201ENST00000349062 Q6ZRM9 215 aa11.68□□□□□ -0.54
TRIM4-201ENST00000349062 GALMQ96C23 342 aa11.68□□□□□ -0.54
TRIM4-201ENST00000349062 CXXC4Q9H2H0 198 aa11.68□□□□□ -0.54
TRIM4-201ENST00000349062 ASH1LQ9NR48 2969 aaKnown RBP11.68□□□□□ -0.54
TRIM4-201ENST00000349062 KIAA1324LA8MWY0 1029 aaPredicted RBP11.68□□□□□ -0.54
TRIM4-201ENST00000349062 IGKV3-15P01624 115 aa11.68□□□□□ -0.54
TRIM4-201ENST00000349062 GAMTQ14353 236 aa11.68□□□□□ -0.54
TRIM4-201ENST00000349062 ZNF324BQ6AW86 544 aaPredicted RBP11.68□□□□□ -0.54
TRIM4-201ENST00000349062 CA5BP1Q8WTZ4 195 aa11.68□□□□□ -0.54
TRIM4-201ENST00000349062 IQCF6A8MYZ5 107 aa11.67□□□□□ -0.54
TRIM4-201ENST00000349062 H3BQ15 152 aa11.67□□□□□ -0.54
TRIM4-201ENST00000349062 PHOX2AO14813 284 aa11.67□□□□□ -0.54
TRIM4-201ENST00000349062 PPP1R2P9O14990 202 aa11.67□□□□□ -0.54
TRIM4-201ENST00000349062 HMGB3O15347 200 aaKnown RBP11.67□□□□□ -0.54
TRIM4-201ENST00000349062 TMEM50AO95807 157 aa11.67□□□□□ -0.54
TRIM4-201ENST00000349062 CYB5R3P00387 301 aaPredicted RBP11.67□□□□□ -0.54
TRIM4-201ENST00000349062 IGHV2-5P01817 119 aa11.67□□□□□ -0.54
TRIM4-201ENST00000349062 FGFRL1Q8N441 504 aa11.67□□□□□ -0.54
TRIM4-201ENST00000349062 RAB39BQ96DA2 213 aa11.67□□□□□ -0.54
TRIM4-201ENST00000349062 PLSCR4Q9NRQ2 329 aa11.67□□□□□ -0.54
TRIM4-201ENST00000349062 TNCP24821 2201 aa11.67□□□□□ -0.54
TRIM4-201ENST00000349062 CTXN2P0C2S0 81 aa11.67□□□□□ -0.54
TRIM4-201ENST00000349062 DRAM1Q8N682 238 aa11.67□□□□□ -0.54
TRIM4-201ENST00000349062 POM121Q96HA1 1249 aa11.67□□□□□ -0.54
TRIM4-201ENST00000349062 TMEM30CPA0ZSE6 113 aa11.67□□□□□ -0.54
TRIM4-201ENST00000349062 FAM157AC9JC47 383 aa11.67□□□□□ -0.54
TRIM4-201ENST00000349062 TESK1Q15569 626 aa11.67□□□□□ -0.54
TRIM4-201ENST00000349062 AKR1C8PQ5T2L2 129 aa11.67□□□□□ -0.54
TRIM4-201ENST00000349062 C1orf185Q5T7R7 199 aa11.67□□□□□ -0.54
TRIM4-201ENST00000349062 STX12Q86Y82 276 aa11.67□□□□□ -0.54
TRIM4-201ENST00000349062 VKORC1L1Q8N0U8 176 aa11.67□□□□□ -0.54
TRIM4-201ENST00000349062 TUBD1Q9UJT1 453 aa11.67□□□□□ -0.54
TRIM4-201ENST00000349062 ZNF729A6NN14 1252 aaPredicted RBP11.66□□□□□ -0.54
TRIM4-201ENST00000349062 ZNF705GA8MUZ8 300 aaPredicted RBP11.66□□□□□ -0.54
TRIM4-201ENST00000349062 PRRG2O14669 202 aa11.66□□□□□ -0.54
TRIM4-201ENST00000349062 GATCO43716 136 aaKnown RBP11.66□□□□□ -0.54
TRIM4-201ENST00000349062 CXCL1P09341 107 aa11.66□□□□□ -0.54
TRIM4-201ENST00000349062 DANCRP0C864 163 aa11.66□□□□□ -0.54
TRIM4-201ENST00000349062 PRB3Q04118 309 aaPredicted RBP11.66□□□□□ -0.54
TRIM4-201ENST00000349062 IL13RA2Q14627 380 aa11.66□□□□□ -0.54
TRIM4-201ENST00000349062 SNRNP40Q96DI7 357 aaKnown RBP11.66□□□□□ -0.54
TRIM4-201ENST00000349062 SPIN2AQ99865 258 aa11.66□□□□□ -0.54
TRIM4-201ENST00000349062 SPIN2BQ9BPZ2 258 aa11.66□□□□□ -0.54
TRIM4-201ENST00000349062 EGLN1Q9GZT9 426 aa11.66□□□□□ -0.54
TRIM4-201ENST00000349062 FAM90A10PA6NDY2 464 aa11.66□□□□□ -0.54
TRIM4-201ENST00000349062 FAM90A18PA6NE21 464 aa11.66□□□□□ -0.54
TRIM4-201ENST00000349062 FAM90A16PA6NEW6 464 aa11.66□□□□□ -0.54
TRIM4-201ENST00000349062 FAM90A20PA6NIJ5 464 aa11.66□□□□□ -0.54
TRIM4-201ENST00000349062 FAM90A8PA6NJQ4 464 aa11.66□□□□□ -0.54
TRIM4-201ENST00000349062 FAM90A7PA6NKC0 464 aa11.66□□□□□ -0.54
TRIM4-201ENST00000349062 FAM90A22PA8MWA6 464 aa11.66□□□□□ -0.54
TRIM4-201ENST00000349062 FAM90A12PA8MX19 464 aa11.66□□□□□ -0.54
TRIM4-201ENST00000349062 FAM90A5PA8MXJ8 464 aa11.66□□□□□ -0.54
TRIM4-201ENST00000349062 FAM90A23PA8MXZ1 464 aa11.66□□□□□ -0.54
TRIM4-201ENST00000349062 GPR137BO60478 399 aa11.66□□□□□ -0.54
TRIM4-201ENST00000349062 CLDN1O95832 211 aa11.66□□□□□ -0.54
TRIM4-201ENST00000349062 FAM90A15PP0C7V4 464 aa11.66□□□□□ -0.54
TRIM4-201ENST00000349062 FAM90A13PP0C7W8 464 aa11.66□□□□□ -0.54
TRIM4-201ENST00000349062 FAM90A14PP0C7W9 464 aa11.66□□□□□ -0.54
TRIM4-201ENST00000349062 FAM90A24PP0C7X0 464 aa11.66□□□□□ -0.54
TRIM4-201ENST00000349062 VDAC1P21796 283 aa11.66□□□□□ -0.54
TRIM4-201ENST00000349062 PRDX2P32119 198 aa11.66□□□□□ -0.54
TRIM4-201ENST00000349062 KLF3P57682 345 aaPredicted RBP11.66□□□□□ -0.54
TRIM4-201ENST00000349062 DLK1P80370 383 aa11.66□□□□□ -0.54
TRIM4-201ENST00000349062 CYB5R2Q6BCY4 276 aa11.66□□□□□ -0.54
TRIM4-201ENST00000349062 IGFL2Q6UWQ7 119 aa11.66□□□□□ -0.54
TRIM4-201ENST00000349062 ACP7Q6ZNF0 438 aa11.66□□□□□ -0.54
TRIM4-201ENST00000349062 ZNF497Q6ZNH5 498 aa11.66□□□□□ -0.54
TRIM4-201ENST00000349062 C11orf53Q8IXP5 236 aa11.66□□□□□ -0.54
TRIM4-201ENST00000349062 H1FOOQ8IZA3 346 aaPredicted RBP11.66□□□□□ -0.54
TRIM4-201ENST00000349062 RIMS4Q9H426 269 aaPredicted RBP11.66□□□□□ -0.54
TRIM4-201ENST00000349062 PLEKHA2Q9HB19 425 aa11.66□□□□□ -0.54
TRIM4-201ENST00000349062 DECR2Q9NUI1 292 aa11.66□□□□□ -0.54
TRIM4-201ENST00000349062 SMIM21Q3B7S5 101 aa11.65□□□□□ -0.54
TRIM4-201ENST00000349062 UNQ6494/PRO21346Q6UXR6 183 aa11.65□□□□□ -0.54
TRIM4-201ENST00000349062 ZNF429Q86V71 674 aa11.65□□□□□ -0.54
TRIM4-201ENST00000349062 TMEM252Q8N6L7 170 aa11.65□□□□□ -0.54
TRIM4-201ENST00000349062 HINT2Q9BX68 163 aa11.65□□□□□ -0.54
TRIM4-201ENST00000349062 DMRT1Q9Y5R6 373 aa11.65□□□□□ -0.54
TRIM4-201ENST00000349062 CACNA1AO00555 2505 aa11.65□□□□□ -0.54
TRIM4-201ENST00000349062 ZFP92A6NM28 416 aa11.65□□□□□ -0.54
TRIM4-201ENST00000349062 CDS2O95674 445 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms