RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 MPV17P39210 176 aa9.34□□□□□ -0.91
CLCN6-202ENST00000346436 TFPI2P48307 235 aa9.34□□□□□ -0.91
CLCN6-202ENST00000346436 HLA-DRB3P79483 266 aa9.34□□□□□ -0.91
CLCN6-202ENST00000346436 PRR27Q6MZM9 219 aa9.34□□□□□ -0.91
CLCN6-202ENST00000346436 LRRC75AQ8NAA5 344 aa9.34□□□□□ -0.91
CLCN6-202ENST00000346436 C5orf66Q9H5L9 145 aa9.34□□□□□ -0.91
CLCN6-202ENST00000346436 TMEM106BQ9NUM4 274 aa9.34□□□□□ -0.91
CLCN6-202ENST00000346436 SLC2A8Q9NY64 477 aa9.34□□□□□ -0.91
CLCN6-202ENST00000346436 TIAF1O95411 115 aa9.34□□□□□ -0.91
CLCN6-202ENST00000346436 USF1P22415 310 aaPredicted RBP9.34□□□□□ -0.91
CLCN6-202ENST00000346436 BSPH1Q075Z2 132 aa9.34□□□□□ -0.91
CLCN6-202ENST00000346436 RTN4RL2Q86UN3 420 aa9.34□□□□□ -0.91
CLCN6-202ENST00000346436 RBM14Q96PK6 669 aaKnown RBP9.34□□□□□ -0.91
CLCN6-202ENST00000346436 TRAV30A0A087WSZ9 112 aa9.34□□□□□ -0.91
CLCN6-202ENST00000346436 NKX2-6A6NCS4 301 aa9.34□□□□□ -0.91
CLCN6-202ENST00000346436 PGA4P0DJD7 388 aa9.34□□□□□ -0.91
CLCN6-202ENST00000346436 DYNLT3P51808 116 aa9.34□□□□□ -0.91
CLCN6-202ENST00000346436 IGLV3-21P80748 117 aaPredicted RBP9.34□□□□□ -0.91
CLCN6-202ENST00000346436 ZNF154Q13106 437 aa9.34□□□□□ -0.91
CLCN6-202ENST00000346436 UNC119Q13432 240 aa9.34□□□□□ -0.91
CLCN6-202ENST00000346436 SMIM7Q9BQ49 75 aa9.34□□□□□ -0.91
CLCN6-202ENST00000346436 CABLES2Q9BTV7 478 aa9.34□□□□□ -0.91
CLCN6-202ENST00000346436 MPTX1A8MV57 137 aa9.34□□□□□ -0.91
CLCN6-202ENST00000346436 S1PR2O95136 353 aa9.34□□□□□ -0.91
CLCN6-202ENST00000346436 LCN2P80188 198 aa9.34□□□□□ -0.91
CLCN6-202ENST00000346436 ENDOGQ14249 297 aaKnown RBP9.34□□□□□ -0.91
CLCN6-202ENST00000346436 DEFB121Q5J5C9 76 aa9.34□□□□□ -0.91
CLCN6-202ENST00000346436 PDPNQ86YL7 162 aa9.34□□□□□ -0.91
CLCN6-202ENST00000346436 LINC00470Q9BZP3 86 aa9.34□□□□□ -0.91
CLCN6-202ENST00000346436 SLC35B3Q9H1N7 401 aa9.34□□□□□ -0.91
CLCN6-202ENST00000346436 IDI2-AS1Q9NZ38 188 aa9.34□□□□□ -0.91
CLCN6-202ENST00000346436 C7orf77A4D0Y5 90 aa9.34□□□□□ -0.91
CLCN6-202ENST00000346436 IGKV3-11P04433 115 aa9.34□□□□□ -0.91
CLCN6-202ENST00000346436 AMTP48728 403 aa9.34□□□□□ -0.91
CLCN6-202ENST00000346436 MEOX2P50222 304 aa9.34□□□□□ -0.91
CLCN6-202ENST00000346436 C1orf100Q5SVJ3 147 aa9.34□□□□□ -0.91
CLCN6-202ENST00000346436 LDLRAD3Q86YD5 345 aa9.34□□□□□ -0.91
CLCN6-202ENST00000346436 OR4A4PQ8NGN8 299 aa9.34□□□□□ -0.91
CLCN6-202ENST00000346436 SEC11CQ9BY50 192 aa9.34□□□□□ -0.91
CLCN6-202ENST00000346436 RNF114Q9Y508 228 aa9.34□□□□□ -0.91
CLCN6-202ENST00000346436 WSB1Q9Y6I7 421 aa9.34□□□□□ -0.91
CLCN6-202ENST00000346436 CEACAM21Q3KPI0 293 aa9.33□□□□□ -0.92
CLCN6-202ENST00000346436 GAPTQ8N292 157 aa9.33□□□□□ -0.92
CLCN6-202ENST00000346436 VOPP1Q96AW1 172 aa9.33□□□□□ -0.92
CLCN6-202ENST00000346436 TMEM186Q96B77 213 aa9.33□□□□□ -0.92
CLCN6-202ENST00000346436 TVP23CQ96ET8 276 aa9.33□□□□□ -0.92
CLCN6-202ENST00000346436 SIGLEC12Q96PQ1 595 aa9.33□□□□□ -0.92
CLCN6-202ENST00000346436 IFT22Q9H7X7 185 aa9.33□□□□□ -0.92
CLCN6-202ENST00000346436 GPR27Q9NS67 375 aa9.33□□□□□ -0.92
CLCN6-202ENST00000346436 GPR132Q9UNW8 380 aa9.33□□□□□ -0.92
CLCN6-202ENST00000346436 A0A1W2PPQ1 181 aa9.33□□□□□ -0.92
CLCN6-202ENST00000346436 PCNTO95613 3336 aa9.33□□□□□ -0.92
CLCN6-202ENST00000346436 P2RY4P51582 365 aa9.33□□□□□ -0.92
CLCN6-202ENST00000346436 KIF26BQ2KJY2 2108 aa9.33□□□□□ -0.92
CLCN6-202ENST00000346436 ZNF488Q96MN9 340 aa9.33□□□□□ -0.92
CLCN6-202ENST00000346436 TRPM7Q96QT4 1865 aa9.33□□□□□ -0.92
CLCN6-202ENST00000346436 CCL28Q9NRJ3 127 aa9.33□□□□□ -0.92
CLCN6-202ENST00000346436 STARD10Q9Y365 291 aa9.33□□□□□ -0.92
CLCN6-202ENST00000346436 IGHV3OR16-10A0A075B7F0 116 aa9.33□□□□□ -0.92
CLCN6-202ENST00000346436 ZNF729A6NN14 1252 aaPredicted RBP9.33□□□□□ -0.92
CLCN6-202ENST00000346436 H7BYZ3 331 aa9.33□□□□□ -0.92
CLCN6-202ENST00000346436 UBE2L6O14933 153 aa9.33□□□□□ -0.92
CLCN6-202ENST00000346436 THBDP07204 575 aa9.33□□□□□ -0.92
CLCN6-202ENST00000346436 MMP7P09237 267 aaPredicted RBP9.33□□□□□ -0.92
CLCN6-202ENST00000346436 CDKN1AP38936 164 aa9.33□□□□□ -0.92
CLCN6-202ENST00000346436 SNAI3Q3KNW1 292 aa9.33□□□□□ -0.92
CLCN6-202ENST00000346436 SLC35E3Q7Z769 313 aa9.33□□□□□ -0.92
CLCN6-202ENST00000346436 SNRNP40Q96DI7 357 aaKnown RBP9.33□□□□□ -0.92
CLCN6-202ENST00000346436 CHST5Q9GZS9 411 aa9.33□□□□□ -0.92
CLCN6-202ENST00000346436 CACNG5Q9UF02 275 aa9.33□□□□□ -0.92
CLCN6-202ENST00000346436 ZNF107Q9UII5 783 aaPredicted RBP9.33□□□□□ -0.92
CLCN6-202ENST00000346436 AHCTF1Q8WYP5 2266 aa9.33□□□□□ -0.92
CLCN6-202ENST00000346436 MDC1Q14676 2089 aaKnown RBP9.33□□□□□ -0.92
CLCN6-202ENST00000346436 IGHV3OR16-12A0A075B7B8 117 aa9.33□□□□□ -0.92
CLCN6-202ENST00000346436 CMC4P56277 68 aaPredicted RBP9.33□□□□□ -0.92
CLCN6-202ENST00000346436 PSG4Q00888 419 aa9.33□□□□□ -0.92
CLCN6-202ENST00000346436 ZNF90Q03938 601 aa9.33□□□□□ -0.92
CLCN6-202ENST00000346436 ZFP36L1Q07352 338 aaKnown RBP9.33□□□□□ -0.92
CLCN6-202ENST00000346436 C1QL2Q7Z5L3 287 aa9.33□□□□□ -0.92
CLCN6-202ENST00000346436 GTSCR1Q86UQ5 136 aa9.33□□□□□ -0.92
CLCN6-202ENST00000346436 TMEM45BQ96B21 275 aa9.33□□□□□ -0.92
CLCN6-202ENST00000346436 TRAV14DV4A0A0A6YYC5 116 aa9.32□□□□□ -0.92
CLCN6-202ENST00000346436 MSGN1A6NI15 193 aa9.32□□□□□ -0.92
CLCN6-202ENST00000346436 EIF3GO75821 320 aaKnown RBP eCLIP9.32□□□□□ -0.92
CLCN6-202ENST00000346436 C16orf92Q96LL3 132 aa9.32□□□□□ -0.92
CLCN6-202ENST00000346436 NRIP2Q9BQI9 281 aa9.32□□□□□ -0.92
CLCN6-202ENST00000346436 HELTA6NFD8 242 aa9.32□□□□□ -0.92
CLCN6-202ENST00000346436 FABP4P15090 132 aa9.32□□□□□ -0.92
CLCN6-202ENST00000346436 IGSF11Q5DX21 431 aa9.32□□□□□ -0.92
CLCN6-202ENST00000346436 LIAT1Q6ZQX7 453 aa9.32□□□□□ -0.92
CLCN6-202ENST00000346436 ABHD12Q8N2K0 398 aa9.32□□□□□ -0.92
CLCN6-202ENST00000346436 OR10D4PQ8NGN7 298 aa9.32□□□□□ -0.92
CLCN6-202ENST00000346436 PTX4Q96A99 478 aa9.32□□□□□ -0.92
CLCN6-202ENST00000346436 PKIBQ9C010 78 aa9.32□□□□□ -0.92
CLCN6-202ENST00000346436 SCN8AQ9UQD0 1980 aa9.32□□□□□ -0.92
CLCN6-202ENST00000346436 PPP5D1E7EU14 171 aa9.32□□□□□ -0.92
CLCN6-202ENST00000346436 PPYP01298 95 aa9.32□□□□□ -0.92
CLCN6-202ENST00000346436 ISG15P05161 165 aa9.32□□□□□ -0.92
CLCN6-202ENST00000346436 TPPP2P59282 170 aa9.32□□□□□ -0.92
CLCN6-202ENST00000346436 SLC38A11Q08AI6 406 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms