RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 OTPQ5XKR4 325 aa16.92■□□□□ 0.3
HDAC4-201ENST00000345617 ALKBH6Q3KRA9 238 aa16.92■□□□□ 0.3
HDAC4-201ENST00000345617 HIKESHIQ53FT3 197 aa16.92■□□□□ 0.3
HDAC4-201ENST00000345617 LYPD8Q6UX82 237 aa16.92■□□□□ 0.3
HDAC4-201ENST00000345617 ZFP64Q9NPA5 681 aa16.92■□□□□ 0.3
HDAC4-201ENST00000345617 UBR3Q6ZT12 1888 aa16.92■□□□□ 0.3
HDAC4-201ENST00000345617 IFNL4K9M1U5 179 aa16.92■□□□□ 0.3
HDAC4-201ENST00000345617 KCNMB1Q16558 191 aa16.92■□□□□ 0.3
HDAC4-201ENST00000345617 Q6AWC8 147 aa16.92■□□□□ 0.3
HDAC4-201ENST00000345617 CADM4Q8NFZ8 388 aa16.92■□□□□ 0.3
HDAC4-201ENST00000345617 OR11G2Q8NGC1 345 aa16.92■□□□□ 0.3
HDAC4-201ENST00000345617 OR2A4O95047 310 aa16.92■□□□□ 0.3
HDAC4-201ENST00000345617 NDUFB4O95168 129 aa16.92■□□□□ 0.3
HDAC4-201ENST00000345617 ZNF660Q6AZW8 331 aaPredicted RBP16.92■□□□□ 0.3
HDAC4-201ENST00000345617 OR2A7Q96R45 310 aa16.92■□□□□ 0.3
HDAC4-201ENST00000345617 LRRC61Q9BV99 259 aa16.92■□□□□ 0.3
HDAC4-201ENST00000345617 ZNF83P51522 516 aa16.91■□□□□ 0.3
HDAC4-201ENST00000345617 OR10AC1Q8NH08 325 aa16.91■□□□□ 0.3
HDAC4-201ENST00000345617 MRPL32Q9BYC8 188 aaKnown RBP16.91■□□□□ 0.3
HDAC4-201ENST00000345617 AICDAQ9GZX7 198 aa16.91■□□□□ 0.3
HDAC4-201ENST00000345617 HCFC1P51610 2035 aa16.91■□□□□ 0.3
HDAC4-201ENST00000345617 HLA-DQB1P01920 261 aa16.91■□□□□ 0.3
HDAC4-201ENST00000345617 HBBP68871 147 aa16.91■□□□□ 0.3
HDAC4-201ENST00000345617 ZNF414Q96IQ9 312 aa16.91■□□□□ 0.3
HDAC4-201ENST00000345617 SH3BGRL3Q9H299 93 aa16.91■□□□□ 0.3
HDAC4-201ENST00000345617 NPIPB9F8W1W9 429 aa16.91■□□□□ 0.3
HDAC4-201ENST00000345617 GFERP55789 205 aa16.91■□□□□ 0.3
HDAC4-201ENST00000345617 DPRXA6NFQ7 191 aa16.91■□□□□ 0.3
HDAC4-201ENST00000345617 PSG2P11465 335 aa16.91■□□□□ 0.3
HDAC4-201ENST00000345617 TMEM177Q53S58 311 aa16.91■□□□□ 0.3
HDAC4-201ENST00000345617 RGP1Q92546 391 aaPredicted RBP16.91■□□□□ 0.3
HDAC4-201ENST00000345617 INSIG2Q9Y5U4 225 aa16.91■□□□□ 0.3
HDAC4-201ENST00000345617 PNLIPP16233 465 aa16.91■□□□□ 0.3
HDAC4-201ENST00000345617 ATG4DQ86TL0 474 aaPredicted RBP16.91■□□□□ 0.3
HDAC4-201ENST00000345617 NPIPB8E9PQR5 432 aa16.91■□□□□ 0.3
HDAC4-201ENST00000345617 NPIPB7O75200 414 aa16.91■□□□□ 0.3
HDAC4-201ENST00000345617 MC5RP33032 325 aa16.91■□□□□ 0.3
HDAC4-201ENST00000345617 RBM11P57052 281 aaKnown RBP16.91■□□□□ 0.3
HDAC4-201ENST00000345617 SFXN3Q9BWM7 321 aa16.91■□□□□ 0.3
HDAC4-201ENST00000345617 ATP5LO75964 103 aa16.9■□□□□ 0.3
HDAC4-201ENST00000345617 MRPL24Q96A35 216 aaKnown RBP16.9■□□□□ 0.3
HDAC4-201ENST00000345617 RCC1P18754 421 aaPredicted RBP16.9■□□□□ 0.3
HDAC4-201ENST00000345617 CXCL2P19875 107 aa16.9■□□□□ 0.3
HDAC4-201ENST00000345617 CEACAM18A8MTB9 384 aa16.9■□□□□ 0.3
HDAC4-201ENST00000345617 PUSL1Q8N0Z8 303 aaKnown RBP16.9■□□□□ 0.3
HDAC4-201ENST00000345617 AKIRIN1Q9H9L7 192 aaPredicted RBP16.9■□□□□ 0.3
HDAC4-201ENST00000345617 ZNF137PP52743 207 aa16.9■□□□□ 0.3
HDAC4-201ENST00000345617 B4GALNT1Q00973 533 aa16.9■□□□□ 0.3
HDAC4-201ENST00000345617 OR5A1Q8NGJ0 315 aa16.9■□□□□ 0.3
HDAC4-201ENST00000345617 A0A087WWC5 75 aa16.9■□□□□ 0.3
HDAC4-201ENST00000345617 PRDX2P32119 198 aa16.9■□□□□ 0.3
HDAC4-201ENST00000345617 CCL17Q92583 94 aa16.9■□□□□ 0.3
HDAC4-201ENST00000345617 NUDT10Q8NFP7 164 aa16.9■□□□□ 0.3
HDAC4-201ENST00000345617 PLXND1Q9Y4D7 1925 aa16.89■□□□□ 0.3
HDAC4-201ENST00000345617 SOCS1O15524 211 aa16.89■□□□□ 0.29
HDAC4-201ENST00000345617 PRSS8Q16651 343 aa16.89■□□□□ 0.29
HDAC4-201ENST00000345617 ATOH1Q92858 354 aaPredicted RBP16.89■□□□□ 0.29
HDAC4-201ENST00000345617 SPANXDQ9BXN6 97 aa16.89■□□□□ 0.29
HDAC4-201ENST00000345617 CBLN4Q9NTU7 201 aa16.89■□□□□ 0.29
HDAC4-201ENST00000345617 J3QT63 122 aa16.89■□□□□ 0.29
HDAC4-201ENST00000345617 EML2O95834 649 aa16.89■□□□□ 0.29
HDAC4-201ENST00000345617 SPSB4Q96A44 273 aa16.89■□□□□ 0.29
HDAC4-201ENST00000345617 GEMIN7Q9H840 131 aaKnown RBP16.89■□□□□ 0.29
HDAC4-201ENST00000345617 SMAD4Q13485 552 aaKnown RBP16.89■□□□□ 0.29
HDAC4-201ENST00000345617 VSTM2LQ96N03 204 aa16.89■□□□□ 0.29
HDAC4-201ENST00000345617 FGF5P12034 268 aa16.89■□□□□ 0.29
HDAC4-201ENST00000345617 TRAV30A0A087WSZ9 112 aa16.89■□□□□ 0.29
HDAC4-201ENST00000345617 OR11H12B2RN74 326 aa16.89■□□□□ 0.29
HDAC4-201ENST00000345617 ISG15P05161 165 aa16.89■□□□□ 0.29
HDAC4-201ENST00000345617 OR11H1Q8NG94 326 aa16.89■□□□□ 0.29
HDAC4-201ENST00000345617 OR11H2Q8NH07 326 aa16.89■□□□□ 0.29
HDAC4-201ENST00000345617 ABHD3Q8WU67 409 aa16.89■□□□□ 0.29
HDAC4-201ENST00000345617 DLX6P56179 175 aa16.89■□□□□ 0.29
HDAC4-201ENST00000345617 RRN3P1Q2M238 152 aa16.89■□□□□ 0.29
HDAC4-201ENST00000345617 MOGAT3Q86VF5 341 aa16.89■□□□□ 0.29
HDAC4-201ENST00000345617 HEXA-AS1Q9H8Q6 139 aa16.89■□□□□ 0.29
HDAC4-201ENST00000345617 H7C1H1 209 aa16.88■□□□□ 0.29
HDAC4-201ENST00000345617 TSPOP30536 169 aa16.88■□□□□ 0.29
HDAC4-201ENST00000345617 WDR25Q64LD2 544 aaPredicted RBP16.88■□□□□ 0.29
HDAC4-201ENST00000345617 C8orf82Q6P1X6 216 aaPredicted RBP16.88■□□□□ 0.29
HDAC4-201ENST00000345617 C3orf80F5H4A9 247 aa16.88■□□□□ 0.29
HDAC4-201ENST00000345617 OR2H1Q9GZK4 316 aa16.88■□□□□ 0.29
HDAC4-201ENST00000345617 MESTQ5EB52 335 aa16.88■□□□□ 0.29
HDAC4-201ENST00000345617 KCNS1Q96KK3 526 aa16.88■□□□□ 0.29
HDAC4-201ENST00000345617 ARL14EPLP0DKL9 152 aa16.88■□□□□ 0.29
HDAC4-201ENST00000345617 DYNLRB2Q8TF09 96 aa16.88■□□□□ 0.29
HDAC4-201ENST00000345617 TMEM56-RWDD3S4R434 201 aa16.88■□□□□ 0.29
HDAC4-201ENST00000345617 ANKRD33Q7Z3H0 272 aa16.88■□□□□ 0.29
HDAC4-201ENST00000345617 SPEM1Q8N4L4 309 aa16.88■□□□□ 0.29
HDAC4-201ENST00000345617 WNT5BQ9H1J7 359 aa16.88■□□□□ 0.29
HDAC4-201ENST00000345617 MED13LQ71F56 2210 aa16.88■□□□□ 0.29
HDAC4-201ENST00000345617 PATE1Q8WXA2 126 aa16.88■□□□□ 0.29
HDAC4-201ENST00000345617 PPP1R3EQ9H7J1 279 aa16.88■□□□□ 0.29
HDAC4-201ENST00000345617 KLK13Q9UKR3 277 aa16.88■□□□□ 0.29
HDAC4-201ENST00000345617 TNFSF15O95150 251 aa16.87■□□□□ 0.29
HDAC4-201ENST00000345617 TM4SF20Q53R12 229 aa16.87■□□□□ 0.29
HDAC4-201ENST00000345617 ZNF714Q96N38 554 aa16.87■□□□□ 0.29
HDAC4-201ENST00000345617 CCL28Q9NRJ3 127 aa16.87■□□□□ 0.29
HDAC4-201ENST00000345617 PLSCR2Q9NRY7 297 aa16.87■□□□□ 0.29
HDAC4-201ENST00000345617 SRIP30626 198 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms