RNA–Protein interactions for RNA: ENST00000345512.7

PTPRU-201, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRU, Length 4,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-201ENST00000345512 HIST1H2BCP62807 126 aa13.26□□□□□ -0.29
PTPRU-201ENST00000345512 ID3Q02535 119 aa13.26□□□□□ -0.29
PTPRU-201ENST00000345512 HIST2H2BEQ16778 126 aa13.26□□□□□ -0.29
PTPRU-201ENST00000345512 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.26□□□□□ -0.29
PTPRU-201ENST00000345512 TMEM251Q8N6I4 163 aa13.26□□□□□ -0.29
PTPRU-201ENST00000345512 HIST1H2BHQ93079 126 aa13.26□□□□□ -0.29
PTPRU-201ENST00000345512 ACY3Q96HD9 319 aa13.26□□□□□ -0.29
PTPRU-201ENST00000345512 HIST1H2BNQ99877 126 aa13.26□□□□□ -0.29
PTPRU-201ENST00000345512 HIST1H2BMQ99879 126 aa13.26□□□□□ -0.29
PTPRU-201ENST00000345512 PMS2P1A4D2B8 440 aa13.26□□□□□ -0.29
PTPRU-201ENST00000345512 HBZP02008 142 aa13.26□□□□□ -0.29
PTPRU-201ENST00000345512 RTL8BQ17RB0 113 aa13.26□□□□□ -0.29
PTPRU-201ENST00000345512 ZNF826PQ6ZT77 177 aa13.26□□□□□ -0.29
PTPRU-201ENST00000345512 DRAM1Q8N682 238 aa13.26□□□□□ -0.29
PTPRU-201ENST00000345512 WFIKKN1Q96NZ8 548 aa13.26□□□□□ -0.29
PTPRU-201ENST00000345512 PSMG3Q9BT73 122 aaPredicted RBP13.26□□□□□ -0.29
PTPRU-201ENST00000345512 CXXC4Q9H2H0 198 aa13.26□□□□□ -0.29
PTPRU-201ENST00000345512 A0A1B0GV90 55 aa13.25□□□□□ -0.29
PTPRU-201ENST00000345512 C3orf80F5H4A9 247 aa13.25□□□□□ -0.29
PTPRU-201ENST00000345512 ZG16O60844 167 aa13.25□□□□□ -0.29
PTPRU-201ENST00000345512 CD1BP29016 333 aa13.25□□□□□ -0.29
PTPRU-201ENST00000345512 GNG4P50150 75 aa13.25□□□□□ -0.29
PTPRU-201ENST00000345512 UBE2G1P62253 170 aa13.25□□□□□ -0.29
PTPRU-201ENST00000345512 SCCPDHQ8NBX0 429 aa13.25□□□□□ -0.29
PTPRU-201ENST00000345512 REPIN1Q9BWE0 567 aaKnown RBP13.25□□□□□ -0.29
PTPRU-201ENST00000345512 GALR2O43603 387 aaPredicted RBP13.25□□□□□ -0.29
PTPRU-201ENST00000345512 RHBDL1O75783 438 aa13.25□□□□□ -0.29
PTPRU-201ENST00000345512 KBTBD11O94819 623 aa13.25□□□□□ -0.29
PTPRU-201ENST00000345512 EGR1P18146 543 aa13.25□□□□□ -0.29
PTPRU-201ENST00000345512 RAB4AP20338 218 aa13.25□□□□□ -0.29
PTPRU-201ENST00000345512 C1QTNF5Q9BXJ0 243 aa13.25□□□□□ -0.29
PTPRU-201ENST00000345512 GPR179Q6PRD1 2367 aa13.25□□□□□ -0.29
PTPRU-201ENST00000345512 CXCL1P09341 107 aa13.25□□□□□ -0.29
PTPRU-201ENST00000345512 GNG10P50151 68 aa13.25□□□□□ -0.29
PTPRU-201ENST00000345512 DCAF10Q5QP82 559 aa13.25□□□□□ -0.29
PTPRU-201ENST00000345512 FOXD3Q9UJU5 478 aaPredicted RBP13.25□□□□□ -0.29
PTPRU-201ENST00000345512 MYO7BQ6PIF6 2116 aa13.25□□□□□ -0.29
PTPRU-201ENST00000345512 AGFG2O95081 481 aa13.25□□□□□ -0.29
PTPRU-201ENST00000345512 UMODP07911 640 aa13.25□□□□□ -0.29
PTPRU-201ENST00000345512 OR4P4Q8NGL7 312 aa13.25□□□□□ -0.29
PTPRU-201ENST00000345512 CA5BP1Q8WTZ4 195 aa13.25□□□□□ -0.29
PTPRU-201ENST00000345512 HSD17B10Q99714 261 aaKnown RBP13.25□□□□□ -0.29
PTPRU-201ENST00000345512 CLCF1Q9UBD9 225 aa13.25□□□□□ -0.29
PTPRU-201ENST00000345512 TRAV38-1A0A0B4J264 116 aa13.24□□□□□ -0.29
PTPRU-201ENST00000345512 H0Y8G0 127 aa13.24□□□□□ -0.29
PTPRU-201ENST00000345512 MT-CO3P00414 261 aa13.24□□□□□ -0.29
PTPRU-201ENST00000345512 TCL1AP56279 114 aa13.24□□□□□ -0.29
PTPRU-201ENST00000345512 POM121L2Q96KW2 1035 aa13.24□□□□□ -0.29
PTPRU-201ENST00000345512 PKIBQ9C010 78 aa13.24□□□□□ -0.29
PTPRU-201ENST00000345512 OR5B3Q8NH48 314 aa13.24□□□□□ -0.29
PTPRU-201ENST00000345512 SRD5A3Q9H8P0 318 aa13.24□□□□□ -0.29
PTPRU-201ENST00000345512 SH2D2AQ9NP31 389 aa13.24□□□□□ -0.29
PTPRU-201ENST00000345512 DIDO1Q9BTC0 2240 aaKnown RBP13.24□□□□□ -0.29
PTPRU-201ENST00000345512 TRGV10A0A0A0MS01 117 aa13.24□□□□□ -0.29
PTPRU-201ENST00000345512 AMTP48728 403 aa13.24□□□□□ -0.29
PTPRU-201ENST00000345512 RTP5Q14D33 572 aa13.24□□□□□ -0.29
PTPRU-201ENST00000345512 HIST3H3Q16695 136 aa13.24□□□□□ -0.29
PTPRU-201ENST00000345512 C10orf91Q5T1B1 145 aa13.24□□□□□ -0.29
PTPRU-201ENST00000345512 OR5P3Q8WZ94 311 aa13.24□□□□□ -0.29
PTPRU-201ENST00000345512 PI4KAP42356 2102 aa13.23□□□□□ -0.29
PTPRU-201ENST00000345512 OBSL1O75147 1896 aa13.23□□□□□ -0.29
PTPRU-201ENST00000345512 HSBP1O75506 76 aa13.23□□□□□ -0.29
PTPRU-201ENST00000345512 STARD6P59095 220 aa13.23□□□□□ -0.29
PTPRU-201ENST00000345512 RANP62826 216 aaKnown RBP13.23□□□□□ -0.29
PTPRU-201ENST00000345512 ERHP84090 104 aaKnown RBP13.23□□□□□ -0.29
PTPRU-201ENST00000345512 TMEM183BQ1AE95 376 aa13.23□□□□□ -0.29
PTPRU-201ENST00000345512 TMEM171Q8WVE6 324 aa13.23□□□□□ -0.29
PTPRU-201ENST00000345512 SDF2L1Q9HCN8 221 aa13.23□□□□□ -0.29
PTPRU-201ENST00000345512 FAM90A26D6RGX4 464 aa13.23□□□□□ -0.29
PTPRU-201ENST00000345512 S1PR2O95136 353 aa13.23□□□□□ -0.29
PTPRU-201ENST00000345512 LRRC75BQ2VPJ9 315 aa13.23□□□□□ -0.29
PTPRU-201ENST00000345512 GFI1BQ5VTD9 330 aa13.23□□□□□ -0.29
PTPRU-201ENST00000345512 CELA3AP09093 270 aa13.23□□□□□ -0.29
PTPRU-201ENST00000345512 ACSM6Q6P461 480 aa13.23□□□□□ -0.29
PTPRU-201ENST00000345512 PPP1R32Q7Z5V6 425 aa13.23□□□□□ -0.29
PTPRU-201ENST00000345512 NOL4LQ96MY1 436 aaPredicted RBP13.23□□□□□ -0.29
PTPRU-201ENST00000345512 SLC45A2Q9UMX9 530 aa13.23□□□□□ -0.29
PTPRU-201ENST00000345512 ROS1P08922 2347 aa13.23□□□□□ -0.29
PTPRU-201ENST00000345512 EP300Q09472 2414 aaPredicted RBP13.23□□□□□ -0.29
PTPRU-201ENST00000345512 COX5BP10606 129 aa13.23□□□□□ -0.29
PTPRU-201ENST00000345512 ZNF525Q8N782 197 aa13.23□□□□□ -0.29
PTPRU-201ENST00000345512 ZNF645Q8N7E2 425 aa13.23□□□□□ -0.29
PTPRU-201ENST00000345512 ANAPC10Q9UM13 185 aa13.23□□□□□ -0.29
PTPRU-201ENST00000345512 C20orf202A1L168 122 aa13.22□□□□□ -0.29
PTPRU-201ENST00000345512 OR10J4P0C629 311 aa13.22□□□□□ -0.29
PTPRU-201ENST00000345512 IER3P46695 156 aa13.22□□□□□ -0.29
PTPRU-201ENST00000345512 ZNF83P51522 516 aa13.22□□□□□ -0.29
PTPRU-201ENST00000345512 RPEL1Q2QD12 228 aa13.22□□□□□ -0.29
PTPRU-201ENST00000345512 TRAT1Q6PIZ9 186 aa13.22□□□□□ -0.29
PTPRU-201ENST00000345512 TMEM183AQ8IXX5 376 aa13.22□□□□□ -0.29
PTPRU-201ENST00000345512 TBX15Q96SF7 602 aa13.22□□□□□ -0.29
PTPRU-201ENST00000345512 PAM16Q9Y3D7 125 aa13.22□□□□□ -0.29
PTPRU-201ENST00000345512 ZNF716A6NP11 495 aa13.22□□□□□ -0.29
PTPRU-201ENST00000345512 ERVFRD-1P60508 538 aa13.22□□□□□ -0.29
PTPRU-201ENST00000345512 SPEM2Q0P670 501 aa13.22□□□□□ -0.29
PTPRU-201ENST00000345512 PSG5Q15238 335 aa13.22□□□□□ -0.29
PTPRU-201ENST00000345512 CYYR1Q96J86 154 aa13.22□□□□□ -0.29
PTPRU-201ENST00000345512 DYNLRB1Q9NP97 96 aa13.22□□□□□ -0.29
PTPRU-201ENST00000345512 TMEM250H0YL14 139 aa13.22□□□□□ -0.29
PTPRU-201ENST00000345512 GCGP01275 180 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms