RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 J3QT63 122 aa10.45□□□□□ -0.74
COL12A1-202ENST00000345356 CA11O75493 328 aa10.45□□□□□ -0.74
COL12A1-202ENST00000345356 FAM117AQ9C073 453 aa10.45□□□□□ -0.74
COL12A1-202ENST00000345356 NRN1Q9NPD7 142 aa10.45□□□□□ -0.74
COL12A1-202ENST00000345356 K7ESF4 209 aa10.45□□□□□ -0.74
COL12A1-202ENST00000345356 SSBP3Q9BWW4 388 aaPredicted RBP10.45□□□□□ -0.74
COL12A1-202ENST00000345356 SYNGR1O43759 233 aa10.45□□□□□ -0.74
COL12A1-202ENST00000345356 OR4A8P0C604 315 aa10.45□□□□□ -0.74
COL12A1-202ENST00000345356 NUBP1P53384 320 aa10.45□□□□□ -0.74
COL12A1-202ENST00000345356 EMP1P54849 157 aa10.45□□□□□ -0.74
COL12A1-202ENST00000345356 RPL23P62829 140 aaKnown RBP10.45□□□□□ -0.74
COL12A1-202ENST00000345356 RPL30P62888 115 aaKnown RBP10.45□□□□□ -0.74
COL12A1-202ENST00000345356 ZNF818PQ6ZRF7 136 aa10.45□□□□□ -0.74
COL12A1-202ENST00000345356 CALHM1Q8IU99 346 aa10.45□□□□□ -0.74
COL12A1-202ENST00000345356 SNRNP40Q96DI7 357 aaKnown RBP10.45□□□□□ -0.74
COL12A1-202ENST00000345356 ATP23Q9Y6H3 246 aa10.45□□□□□ -0.74
COL12A1-202ENST00000345356 J3QR06 171 aa10.45□□□□□ -0.74
COL12A1-202ENST00000345356 CEACAM1P13688 526 aa10.45□□□□□ -0.74
COL12A1-202ENST00000345356 SNAI3Q3KNW1 292 aa10.45□□□□□ -0.74
COL12A1-202ENST00000345356 NEUROG3Q9Y4Z2 214 aa10.45□□□□□ -0.74
COL12A1-202ENST00000345356 SIPA1L3O60292 1781 aaPredicted RBP10.44□□□□□ -0.74
COL12A1-202ENST00000345356 MEOX1P50221 254 aa10.44□□□□□ -0.74
COL12A1-202ENST00000345356 CCL11P51671 97 aa10.44□□□□□ -0.74
COL12A1-202ENST00000345356 ZP4Q12836 540 aa10.44□□□□□ -0.74
COL12A1-202ENST00000345356 MRPL13Q9BYD1 178 aaKnown RBP10.44□□□□□ -0.74
COL12A1-202ENST00000345356 hADV38S2A0JD32 116 aa10.44□□□□□ -0.74
COL12A1-202ENST00000345356 TNFSF14O43557 240 aa10.44□□□□□ -0.74
COL12A1-202ENST00000345356 CA1P00915 261 aaPredicted RBP10.44□□□□□ -0.74
COL12A1-202ENST00000345356 CENPWQ5EE01 88 aa10.44□□□□□ -0.74
COL12A1-202ENST00000345356 TCF23Q7RTU1 214 aa10.44□□□□□ -0.74
COL12A1-202ENST00000345356 NUDT10Q8NFP7 164 aa10.44□□□□□ -0.74
COL12A1-202ENST00000345356 VSTM2AQ8TAG5 236 aa10.44□□□□□ -0.74
COL12A1-202ENST00000345356 NEU1Q99519 415 aa10.44□□□□□ -0.74
COL12A1-202ENST00000345356 SPTBP11277 2137 aa10.44□□□□□ -0.74
COL12A1-202ENST00000345356 FAM90A26D6RGX4 464 aa10.44□□□□□ -0.74
COL12A1-202ENST00000345356 C3orf80F5H4A9 247 aa10.44□□□□□ -0.74
COL12A1-202ENST00000345356 RAC3P60763 192 aa10.44□□□□□ -0.74
COL12A1-202ENST00000345356 TNXAQ16473 311 aa10.44□□□□□ -0.74
COL12A1-202ENST00000345356 OR1L1Q8NH94 360 aa10.44□□□□□ -0.74
COL12A1-202ENST00000345356 JKAMPQ9P055 326 aa10.44□□□□□ -0.74
COL12A1-202ENST00000345356 A0A1W2PRS3 328 aa10.44□□□□□ -0.74
COL12A1-202ENST00000345356 H3BUT2 72 aa10.44□□□□□ -0.74
COL12A1-202ENST00000345356 LIPFP07098 398 aa10.44□□□□□ -0.74
COL12A1-202ENST00000345356 KIR2DL1P43626 348 aaPredicted RBP10.44□□□□□ -0.74
COL12A1-202ENST00000345356 KIR2DL2P43627 348 aaPredicted RBP10.44□□□□□ -0.74
COL12A1-202ENST00000345356 FOXA3P55318 350 aaPredicted RBP10.44□□□□□ -0.74
COL12A1-202ENST00000345356 CST9Q5W186 159 aa10.44□□□□□ -0.74
COL12A1-202ENST00000345356 OR1N2Q8NGR9 330 aa10.44□□□□□ -0.74
COL12A1-202ENST00000345356 Q96M66 194 aa10.44□□□□□ -0.74
COL12A1-202ENST00000345356 TMEM208Q9BTX3 173 aa10.44□□□□□ -0.74
COL12A1-202ENST00000345356 A0A1B0GWB2 263 aa10.43□□□□□ -0.74
COL12A1-202ENST00000345356 ZG16O60844 167 aa10.43□□□□□ -0.74
COL12A1-202ENST00000345356 CELA2BP08218 269 aaPredicted RBP10.43□□□□□ -0.74
COL12A1-202ENST00000345356 UCP3P55916 312 aa10.43□□□□□ -0.74
COL12A1-202ENST00000345356 TWIST1Q15672 202 aa10.43□□□□□ -0.74
COL12A1-202ENST00000345356 TMEM177Q53S58 311 aa10.43□□□□□ -0.74
COL12A1-202ENST00000345356 GPBAR1Q8TDU6 330 aa10.43□□□□□ -0.74
COL12A1-202ENST00000345356 UCN2Q96RP3 112 aa10.43□□□□□ -0.74
COL12A1-202ENST00000345356 CXXC4Q9H2H0 198 aa10.43□□□□□ -0.74
COL12A1-202ENST00000345356 OR51B2Q9Y5P1 312 aa10.43□□□□□ -0.74
COL12A1-202ENST00000345356 CKS2P33552 79 aa10.43□□□□□ -0.74
COL12A1-202ENST00000345356 ADMP35318 185 aa10.43□□□□□ -0.74
COL12A1-202ENST00000345356 ZNFX1Q9P2E3 1918 aaKnown RBP10.43□□□□□ -0.74
COL12A1-202ENST00000345356 LINC01387J3KSC0 135 aa10.43□□□□□ -0.74
COL12A1-202ENST00000345356 NDUFB3O43676 98 aa10.43□□□□□ -0.74
COL12A1-202ENST00000345356 FGF12P61328 243 aa10.43□□□□□ -0.74
COL12A1-202ENST00000345356 C1orf194Q5T5A4 169 aa10.43□□□□□ -0.74
COL12A1-202ENST00000345356 PTCRAQ6ISU1 281 aaPredicted RBP10.43□□□□□ -0.74
COL12A1-202ENST00000345356 TRPM3Q9HCF6 1732 aaPredicted RBP10.43□□□□□ -0.74
COL12A1-202ENST00000345356 LMO7DNF2Z398 122 aa10.43□□□□□ -0.74
COL12A1-202ENST00000345356 IL9P15248 144 aa10.43□□□□□ -0.74
COL12A1-202ENST00000345356 TM4SF4P48230 202 aa10.43□□□□□ -0.74
COL12A1-202ENST00000345356 LRRC10Q5BKY1 277 aa10.43□□□□□ -0.74
COL12A1-202ENST00000345356 ZNF324BQ6AW86 544 aaPredicted RBP10.43□□□□□ -0.74
COL12A1-202ENST00000345356 SF3B5Q9BWJ5 86 aaKnown RBP10.43□□□□□ -0.74
COL12A1-202ENST00000345356 FNDC4Q9H6D8 234 aaPredicted RBP10.43□□□□□ -0.74
COL12A1-202ENST00000345356 ATXN7O15265 892 aaPredicted RBP10.43□□□□□ -0.74
COL12A1-202ENST00000345356 TNFSF13O75888 250 aa10.43□□□□□ -0.74
COL12A1-202ENST00000345356 GZMHP20718 246 aa10.43□□□□□ -0.74
COL12A1-202ENST00000345356 KCNK17Q96T54 332 aa10.43□□□□□ -0.74
COL12A1-202ENST00000345356 SCN3AQ9NY46 2000 aa10.42□□□□□ -0.74
COL12A1-202ENST00000345356 CCL20P78556 96 aa10.42□□□□□ -0.74
COL12A1-202ENST00000345356 APOBEC4Q8WW27 367 aaKnown RBP10.42□□□□□ -0.74
COL12A1-202ENST00000345356 HSPB7Q9UBY9 170 aa10.42□□□□□ -0.74
COL12A1-202ENST00000345356 SOX21Q9Y651 276 aaPredicted RBP10.42□□□□□ -0.74
COL12A1-202ENST00000345356 MNX1P50219 401 aaPredicted RBP10.42□□□□□ -0.74
COL12A1-202ENST00000345356 RTN4RQ9BZR6 473 aa10.42□□□□□ -0.74
COL12A1-202ENST00000345356 ABCA3Q99758 1704 aa10.42□□□□□ -0.74
COL12A1-202ENST00000345356 C7orf71A4D174 169 aa10.42□□□□□ -0.74
COL12A1-202ENST00000345356 ZNF716A6NP11 495 aa10.42□□□□□ -0.74
COL12A1-202ENST00000345356 RPL31P62899 125 aaKnown RBP10.42□□□□□ -0.74
COL12A1-202ENST00000345356 RNPS1Q15287 305 aaKnown RBP10.42□□□□□ -0.74
COL12A1-202ENST00000345356 C9orf40Q8IXQ3 194 aa10.42□□□□□ -0.74
COL12A1-202ENST00000345356 FAM222BQ8WU58 562 aa10.42□□□□□ -0.74
COL12A1-202ENST00000345356 RPEQ96AT9 228 aa10.42□□□□□ -0.74
COL12A1-202ENST00000345356 IGKV1D-42A0A075B6H8 117 aa10.42□□□□□ -0.74
COL12A1-202ENST00000345356 ADCYAP1P18509 176 aa10.42□□□□□ -0.74
COL12A1-202ENST00000345356 TM4SF20Q53R12 229 aa10.42□□□□□ -0.74
COL12A1-202ENST00000345356 WDR54Q9H977 334 aa10.42□□□□□ -0.74
COL12A1-202ENST00000345356 SLX4Q8IY92 1834 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms