RNA–Protein interactions for RNA: ENST00000344951.8

CUL3-202, Transcript of cullin 3, humanhuman

TSL 2 BASIC

Gene CUL3, Length 6,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-202ENST00000344951 FAM74A3Q4VXF1 159 aa13.05□□□□□ -0.32
CUL3-202ENST00000344951 PRB4P10163 310 aaPredicted RBP13.04□□□□□ -0.32
CUL3-202ENST00000344951 PRB3Q04118 309 aaPredicted RBP13.04□□□□□ -0.32
CUL3-202ENST00000344951 LHX8Q68G74 356 aa13.04□□□□□ -0.32
CUL3-202ENST00000344951 TBX21Q9UL17 535 aa13.04□□□□□ -0.32
CUL3-202ENST00000344951 PRRC2BQ5JSZ5 2229 aaKnown RBP13.04□□□□□ -0.32
CUL3-202ENST00000344951 IGHV3OR16-8A0A075B7F1 116 aa13.04□□□□□ -0.32
CUL3-202ENST00000344951 PGPA6NDG6 321 aa13.04□□□□□ -0.32
CUL3-202ENST00000344951 SAA1P0DJI8 122 aaPredicted RBP13.04□□□□□ -0.32
CUL3-202ENST00000344951 NANOS3P60323 173 aaKnown RBP13.04□□□□□ -0.32
CUL3-202ENST00000344951 UBE2V2Q15819 145 aa13.04□□□□□ -0.32
CUL3-202ENST00000344951 IL11P20809 199 aa13.04□□□□□ -0.32
CUL3-202ENST00000344951 FAM3BP58499 235 aaPredicted RBP13.04□□□□□ -0.32
CUL3-202ENST00000344951 HIST1H1AQ02539 215 aaPredicted RBP13.04□□□□□ -0.32
CUL3-202ENST00000344951 VKORC1L1Q8N0U8 176 aa13.04□□□□□ -0.32
CUL3-202ENST00000344951 TRAV12-3A0A0B4J271 114 aa13.04□□□□□ -0.32
CUL3-202ENST00000344951 CENPVL1A0A0U1RR11 272 aa13.04□□□□□ -0.32
CUL3-202ENST00000344951 GAGE10A6NGK3 116 aa13.04□□□□□ -0.32
CUL3-202ENST00000344951 GZMHP20718 246 aa13.04□□□□□ -0.32
CUL3-202ENST00000344951 RUNX1Q01196 453 aa13.04□□□□□ -0.32
CUL3-202ENST00000344951 BEND2Q8NDZ0 799 aa13.04□□□□□ -0.32
CUL3-202ENST00000344951 ADAMTSL3P82987 1691 aa13.04□□□□□ -0.32
CUL3-202ENST00000344951 ST6GALNAC3Q8NDV1 305 aa13.04□□□□□ -0.32
CUL3-202ENST00000344951 ITLN1Q8WWA0 313 aa13.04□□□□□ -0.32
CUL3-202ENST00000344951 MFAP4P55083 255 aa13.04□□□□□ -0.32
CUL3-202ENST00000344951 C11orf44Q8N8P7 122 aa13.04□□□□□ -0.32
CUL3-202ENST00000344951 GPBAR1Q8TDU6 330 aa13.04□□□□□ -0.32
CUL3-202ENST00000344951 PXMP4Q9Y6I8 212 aa13.04□□□□□ -0.32
CUL3-202ENST00000344951 RPL27AP46776 148 aaKnown RBP13.03□□□□□ -0.32
CUL3-202ENST00000344951 ANGPTL4Q9BY76 406 aa13.03□□□□□ -0.32
CUL3-202ENST00000344951 NMBP08949 121 aa13.03□□□□□ -0.32
CUL3-202ENST00000344951 ATP1A1-AS1Q5TC04 95 aa13.03□□□□□ -0.32
CUL3-202ENST00000344951 HSPB9Q9BQS6 159 aa13.03□□□□□ -0.32
CUL3-202ENST00000344951 A0A1W2PS18 150 aa13.03□□□□□ -0.32
CUL3-202ENST00000344951 DRD3P35462 400 aa13.03□□□□□ -0.32
CUL3-202ENST00000344951 MRPS18AQ9NVS2 196 aaKnown RBP13.03□□□□□ -0.32
CUL3-202ENST00000344951 OR5AC2Q9NZP5 309 aa13.03□□□□□ -0.32
CUL3-202ENST00000344951 M0QZK8 103 aa13.03□□□□□ -0.32
CUL3-202ENST00000344951 GGCTO75223 188 aaKnown RBP13.03□□□□□ -0.32
CUL3-202ENST00000344951 CTGFP29279 349 aa13.03□□□□□ -0.32
CUL3-202ENST00000344951 PGLYRP3Q96LB9 341 aa13.03□□□□□ -0.32
CUL3-202ENST00000344951 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.03□□□□□ -0.32
CUL3-202ENST00000344951 CDX1P47902 265 aaPredicted RBP13.03□□□□□ -0.32
CUL3-202ENST00000344951 ABLIM2Q6H8Q1 611 aa13.03□□□□□ -0.32
CUL3-202ENST00000344951 LINC01560Q8TB33 94 aa13.03□□□□□ -0.32
CUL3-202ENST00000344951 LSM10Q969L4 123 aaKnown RBP13.03□□□□□ -0.32
CUL3-202ENST00000344951 LIPT2A6NK58 231 aa13.02□□□□□ -0.32
CUL3-202ENST00000344951 NDUFB4O95168 129 aa13.02□□□□□ -0.32
CUL3-202ENST00000344951 TDGF1P13385 188 aa13.02□□□□□ -0.32
CUL3-202ENST00000344951 TMEM160Q9NX00 188 aa13.02□□□□□ -0.32
CUL3-202ENST00000344951 FOXI3A8MTJ6 420 aaPredicted RBP13.02□□□□□ -0.32
CUL3-202ENST00000344951 OR2Y1Q8NGV0 311 aa13.02□□□□□ -0.32
CUL3-202ENST00000344951 NRIP2Q9BQI9 281 aa13.02□□□□□ -0.32
CUL3-202ENST00000344951 ZNF107Q9UII5 783 aaPredicted RBP13.02□□□□□ -0.32
CUL3-202ENST00000344951 ISG15P05161 165 aa13.02□□□□□ -0.33
CUL3-202ENST00000344951 LINC00869P0C866 280 aa13.02□□□□□ -0.33
CUL3-202ENST00000344951 ATP6V0CP27449 155 aa13.02□□□□□ -0.33
CUL3-202ENST00000344951 FAM106AQ4KMX7 169 aa13.02□□□□□ -0.33
CUL3-202ENST00000344951 FAM209BQ5JX69 171 aa13.02□□□□□ -0.33
CUL3-202ENST00000344951 UNQ9370/PRO34162Q6UXP9 181 aa13.02□□□□□ -0.33
CUL3-202ENST00000344951 TRIP11Q15643 1979 aa13.02□□□□□ -0.33
CUL3-202ENST00000344951 SLC25A17O43808 307 aa13.02□□□□□ -0.33
CUL3-202ENST00000344951 FABP2P12104 132 aa13.02□□□□□ -0.33
CUL3-202ENST00000344951 MRPL30Q8TCC3 161 aaKnown RBP13.02□□□□□ -0.33
CUL3-202ENST00000344951 SRSF12Q8WXF0 261 aaKnown RBP13.02□□□□□ -0.33
CUL3-202ENST00000344951 RHOVQ96L33 236 aa13.02□□□□□ -0.33
CUL3-202ENST00000344951 A0A1W2PPV9 198 aa13.02□□□□□ -0.33
CUL3-202ENST00000344951 CFDP00746 253 aaPredicted RBP13.02□□□□□ -0.33
CUL3-202ENST00000344951 BGLAPP02818 100 aa13.02□□□□□ -0.33
CUL3-202ENST00000344951 PUSL1Q8N0Z8 303 aaKnown RBP13.02□□□□□ -0.33
CUL3-202ENST00000344951 WISP3O95389 354 aaPredicted RBP13.01□□□□□ -0.33
CUL3-202ENST00000344951 PGA4P0DJD7 388 aa13.01□□□□□ -0.33
CUL3-202ENST00000344951 PGA5P0DJD9 388 aa13.01□□□□□ -0.33
CUL3-202ENST00000344951 RBM11P57052 281 aaKnown RBP13.01□□□□□ -0.33
CUL3-202ENST00000344951 PQLC2Q6ZP29 291 aa13.01□□□□□ -0.33
CUL3-202ENST00000344951 ZNF385AQ96PM9 386 aaKnown RBP13.01□□□□□ -0.33
CUL3-202ENST00000344951 TMEM170BQ5T4T1 132 aa13.01□□□□□ -0.33
CUL3-202ENST00000344951 C18orf15Q96N68 181 aa13.01□□□□□ -0.33
CUL3-202ENST00000344951 SPAG17Q6Q759 2223 aa13.01□□□□□ -0.33
CUL3-202ENST00000344951 KIAA1644Q3SXP7 199 aa13.01□□□□□ -0.33
CUL3-202ENST00000344951 FHL5Q5TD97 284 aa13.01□□□□□ -0.33
CUL3-202ENST00000344951 ZNF660Q6AZW8 331 aaPredicted RBP13.01□□□□□ -0.33
CUL3-202ENST00000344951 SNAI2O43623 268 aa13.01□□□□□ -0.33
CUL3-202ENST00000344951 AMY1AP04745 511 aa13.01□□□□□ -0.33
CUL3-202ENST00000344951 GAB4Q2WGN9 574 aa13.01□□□□□ -0.33
CUL3-202ENST00000344951 C10orf126Q8N4M7 172 aa13.01□□□□□ -0.33
CUL3-202ENST00000344951 RNASEH2CQ8TDP1 164 aaKnown RBP13.01□□□□□ -0.33
CUL3-202ENST00000344951 LCN2P80188 198 aa13.01□□□□□ -0.33
CUL3-202ENST00000344951 TMEM101Q96IK0 257 aa13.01□□□□□ -0.33
CUL3-202ENST00000344951 FOCADQ5VW36 1801 aa13.01□□□□□ -0.33
CUL3-202ENST00000344951 SCN1AP35498 2009 aa13.01□□□□□ -0.33
CUL3-202ENST00000344951 SCN3AQ9NY46 2000 aa13.01□□□□□ -0.33
CUL3-202ENST00000344951 SEC11BP0C7V7 166 aa13□□□□□ -0.33
CUL3-202ENST00000344951 DCAF10Q5QP82 559 aa13□□□□□ -0.33
CUL3-202ENST00000344951 HBZP02008 142 aa13□□□□□ -0.33
CUL3-202ENST00000344951 LTBRP36941 435 aa13□□□□□ -0.33
CUL3-202ENST00000344951 LBHQ53QV2 105 aaPredicted RBP13□□□□□ -0.33
CUL3-202ENST00000344951 IBA57Q5T440 356 aaKnown RBP13□□□□□ -0.33
CUL3-202ENST00000344951 MRGPRGQ86SM5 289 aa13□□□□□ -0.33
CUL3-202ENST00000344951 GDF9O60383 454 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms