RNA–Protein interactions for RNA: ENST00000344791.6

LYSMD4-202, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LYSMD4, Length 2,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-202ENST00000344791 SMIM6P0DI80 62 aa16.06■□□□□ 0.16
LYSMD4-202ENST00000344791 ZNF146Q15072 292 aa16.06■□□□□ 0.16
LYSMD4-202ENST00000344791 GFI1BQ5VTD9 330 aa16.06■□□□□ 0.16
LYSMD4-202ENST00000344791 SPNS3Q6ZMD2 512 aa16.06■□□□□ 0.16
LYSMD4-202ENST00000344791 SSX9Q7RTT3 188 aa16.06■□□□□ 0.16
LYSMD4-202ENST00000344791 Q8IYB0 196 aa16.06■□□□□ 0.16
LYSMD4-202ENST00000344791 TMEM178AQ8NBL3 297 aa16.06■□□□□ 0.16
LYSMD4-202ENST00000344791 GATAD1Q8WUU5 269 aa16.06■□□□□ 0.16
LYSMD4-202ENST00000344791 GMPPAQ96IJ6 420 aaPredicted RBP16.06■□□□□ 0.16
LYSMD4-202ENST00000344791 WDR61Q9GZS3 305 aaKnown RBP16.06■□□□□ 0.16
LYSMD4-202ENST00000344791 DOK5Q9P104 306 aa16.06■□□□□ 0.16
LYSMD4-202ENST00000344791 TNFRSF9Q07011 255 aa16.05■□□□□ 0.16
LYSMD4-202ENST00000344791 FOXF2Q12947 444 aa16.05■□□□□ 0.16
LYSMD4-202ENST00000344791 LRRC75BQ2VPJ9 315 aa16.05■□□□□ 0.16
LYSMD4-202ENST00000344791 FDCSPQ8NFU4 85 aa16.05■□□□□ 0.16
LYSMD4-202ENST00000344791 RPUSD4Q96CM3 377 aaKnown RBP16.05■□□□□ 0.16
LYSMD4-202ENST00000344791 MBNL3Q9NUK0 354 aaKnown RBP16.05■□□□□ 0.16
LYSMD4-202ENST00000344791 SLC39A9Q9NUM3 307 aa16.05■□□□□ 0.16
LYSMD4-202ENST00000344791 TMEM30CPA0ZSE6 113 aa16.05■□□□□ 0.16
LYSMD4-202ENST00000344791 M0R296 226 aa16.05■□□□□ 0.16
LYSMD4-202ENST00000344791 EIF2S3P41091 472 aaKnown RBP16.05■□□□□ 0.16
LYSMD4-202ENST00000344791 TAF15Q92804 592 aaKnown RBP eCLIP16.05■□□□□ 0.16
LYSMD4-202ENST00000344791 ODAMA1E959 279 aa16.05■□□□□ 0.16
LYSMD4-202ENST00000344791 B2MP61769 119 aa16.05■□□□□ 0.16
LYSMD4-202ENST00000344791 GABRA6Q16445 453 aa16.05■□□□□ 0.16
LYSMD4-202ENST00000344791 Q3ZCU0 254 aa16.05■□□□□ 0.16
LYSMD4-202ENST00000344791 RPP25LQ8N5L8 163 aaKnown RBP16.05■□□□□ 0.16
LYSMD4-202ENST00000344791 OR5T1Q8NG75 326 aa16.05■□□□□ 0.16
LYSMD4-202ENST00000344791 PSG11Q9UQ72 335 aa16.05■□□□□ 0.16
LYSMD4-202ENST00000344791 SPTBN2O15020 2390 aa16.04■□□□□ 0.16
LYSMD4-202ENST00000344791 ROS1P08922 2347 aa16.04■□□□□ 0.16
LYSMD4-202ENST00000344791 TNFSF10P50591 281 aa16.04■□□□□ 0.16
LYSMD4-202ENST00000344791 SP5Q6BEB4 398 aaPredicted RBP16.04■□□□□ 0.16
LYSMD4-202ENST00000344791 FAM214BQ7L5A3 538 aa16.04■□□□□ 0.16
LYSMD4-202ENST00000344791 ZNF645Q8N7E2 425 aa16.04■□□□□ 0.16
LYSMD4-202ENST00000344791 COQ2Q96H96 371 aa16.04■□□□□ 0.16
LYSMD4-202ENST00000344791 TRAV20A0A0B4J274 112 aa16.04■□□□□ 0.16
LYSMD4-202ENST00000344791 SLC25A6P12236 298 aa16.04■□□□□ 0.16
LYSMD4-202ENST00000344791 ADIRFQ15847 76 aa16.04■□□□□ 0.16
LYSMD4-202ENST00000344791 CDPF1Q6NVV7 123 aa16.04■□□□□ 0.16
LYSMD4-202ENST00000344791 OR13A1Q8NGR1 328 aa16.04■□□□□ 0.16
LYSMD4-202ENST00000344791 ZNF251Q9BRH9 671 aa16.04■□□□□ 0.16
LYSMD4-202ENST00000344791 NPIPB11E5RHQ5 1161 aa16.03■□□□□ 0.16
LYSMD4-202ENST00000344791 ZNF737O75373 536 aa16.03■□□□□ 0.16
LYSMD4-202ENST00000344791 TUBG1P23258 451 aa16.03■□□□□ 0.16
LYSMD4-202ENST00000344791 TFF3Q07654 80 aa16.03■□□□□ 0.16
LYSMD4-202ENST00000344791 ACSM6Q6P461 480 aa16.03■□□□□ 0.16
LYSMD4-202ENST00000344791 FIP1L1Q6UN15 594 aaKnown RBP16.03■□□□□ 0.16
LYSMD4-202ENST00000344791 ZDHHC11Q9H8X9 412 aa16.03■□□□□ 0.16
LYSMD4-202ENST00000344791 WIPI2Q9Y4P8 454 aa16.03■□□□□ 0.16
LYSMD4-202ENST00000344791 COL10A1Q03692 680 aa16.03■□□□□ 0.16
LYSMD4-202ENST00000344791 ZNF610Q8N9Z0 462 aa16.03■□□□□ 0.16
LYSMD4-202ENST00000344791 MALSU1Q96EH3 234 aa16.03■□□□□ 0.16
LYSMD4-202ENST00000344791 SEBOXQ9HB31 216 aaPredicted RBP16.03■□□□□ 0.16
LYSMD4-202ENST00000344791 DUSP13Q9UII6 198 aa16.03■□□□□ 0.16
LYSMD4-202ENST00000344791 IQCF6A8MYZ5 107 aa16.02■□□□□ 0.16
LYSMD4-202ENST00000344791 TMEM41BQ5BJD5 291 aa16.02■□□□□ 0.16
LYSMD4-202ENST00000344791 WDR25Q64LD2 544 aaPredicted RBP16.02■□□□□ 0.16
LYSMD4-202ENST00000344791 CA5BP1Q8WTZ4 195 aa16.02■□□□□ 0.16
LYSMD4-202ENST00000344791 TREM2Q9NZC2 230 aa16.02■□□□□ 0.16
LYSMD4-202ENST00000344791 LINC00473A8K010 186 aa16.02■□□□□ 0.15
LYSMD4-202ENST00000344791 HIST1H2BKO60814 126 aa16.02■□□□□ 0.15
LYSMD4-202ENST00000344791 HIST1H2BJP06899 126 aa16.02■□□□□ 0.15
LYSMD4-202ENST00000344791 HIST1H2BOP23527 126 aa16.02■□□□□ 0.15
LYSMD4-202ENST00000344791 HIST1H2BBP33778 126 aa16.02■□□□□ 0.15
LYSMD4-202ENST00000344791 HIST1H2BDP58876 126 aa16.02■□□□□ 0.15
LYSMD4-202ENST00000344791 BRWD1-AS2P59051 145 aa16.02■□□□□ 0.15
LYSMD4-202ENST00000344791 HIST1H2BCP62807 126 aa16.02■□□□□ 0.15
LYSMD4-202ENST00000344791 HIST2H2BEQ16778 126 aa16.02■□□□□ 0.15
LYSMD4-202ENST00000344791 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.02■□□□□ 0.15
LYSMD4-202ENST00000344791 SLC35E3Q7Z769 313 aa16.02■□□□□ 0.15
LYSMD4-202ENST00000344791 C11orf53Q8IXP5 236 aa16.02■□□□□ 0.15
LYSMD4-202ENST00000344791 C9orf106Q8NAJ2 232 aa16.02■□□□□ 0.15
LYSMD4-202ENST00000344791 HIST1H2BHQ93079 126 aa16.02■□□□□ 0.15
LYSMD4-202ENST00000344791 HIST1H2BNQ99877 126 aa16.02■□□□□ 0.15
LYSMD4-202ENST00000344791 HIST1H2BMQ99879 126 aa16.02■□□□□ 0.15
LYSMD4-202ENST00000344791 RYDENQ9NUL5 291 aaKnown RBP16.02■□□□□ 0.15
LYSMD4-202ENST00000344791 IFITM10A6NMD0 228 aa16.01■□□□□ 0.15
LYSMD4-202ENST00000344791 PPIHO43447 177 aaKnown RBP16.01■□□□□ 0.15
LYSMD4-202ENST00000344791 FGF7P21781 194 aa16.01■□□□□ 0.15
LYSMD4-202ENST00000344791 CTAG1AP78358 180 aa16.01■□□□□ 0.15
LYSMD4-202ENST00000344791 DPPA3Q6W0C5 159 aa16.01■□□□□ 0.15
LYSMD4-202ENST00000344791 VKORC1L1Q8N0U8 176 aa16.01■□□□□ 0.15
LYSMD4-202ENST00000344791 CISD1Q9NZ45 108 aaKnown RBP16.01■□□□□ 0.15
LYSMD4-202ENST00000344791 WDR82Q6UXN9 313 aa16.01■□□□□ 0.15
LYSMD4-202ENST00000344791 DTD1Q8TEA8 209 aa16.01■□□□□ 0.15
LYSMD4-202ENST00000344791 SMIM7Q9BQ49 75 aa16.01■□□□□ 0.15
LYSMD4-202ENST00000344791 RNF212BA8MTL3 300 aa16.01■□□□□ 0.15
LYSMD4-202ENST00000344791 CECR9P0C854 216 aa16.01■□□□□ 0.15
LYSMD4-202ENST00000344791 PLA2G2CQ5R387 149 aa16.01■□□□□ 0.15
LYSMD4-202ENST00000344791 Q6ZT83 130 aa16.01■□□□□ 0.15
LYSMD4-202ENST00000344791 H2BFWTQ7Z2G1 175 aa16.01■□□□□ 0.15
LYSMD4-202ENST00000344791 FAM210BQ96KR6 192 aa16.01■□□□□ 0.15
LYSMD4-202ENST00000344791 TOLLIPQ9H0E2 274 aa16.01■□□□□ 0.15
LYSMD4-202ENST00000344791 IGHV3OR15-7A0A075B7D8 119 aa16■□□□□ 0.15
LYSMD4-202ENST00000344791 LRRC30A6NM36 301 aa16■□□□□ 0.15
LYSMD4-202ENST00000344791 RTP5Q14D33 572 aa16■□□□□ 0.15
LYSMD4-202ENST00000344791 VHLLQ6RSH7 139 aa16■□□□□ 0.15
LYSMD4-202ENST00000344791 ACP7Q6ZNF0 438 aa16■□□□□ 0.15
LYSMD4-202ENST00000344791 GPR61Q9BZJ8 451 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms