RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 ODF3L1Q8IXM7 274 aa11.17□□□□□ -0.62
CDC42-202ENST00000344548 CLEC18CQ8NCF0 446 aa11.17□□□□□ -0.62
CDC42-202ENST00000344548 ST8SIA2Q92186 375 aa11.17□□□□□ -0.62
CDC42-202ENST00000344548 H1FXQ92522 213 aaKnown RBP11.17□□□□□ -0.62
CDC42-202ENST00000344548 ZNF471Q9BX82 626 aaPredicted RBP11.17□□□□□ -0.62
CDC42-202ENST00000344548 PLEKHF2Q9H8W4 249 aa11.17□□□□□ -0.62
CDC42-202ENST00000344548 ARHGAP32A7KAX9 2087 aa11.17□□□□□ -0.62
CDC42-202ENST00000344548 PITX3O75364 302 aa11.16□□□□□ -0.62
CDC42-202ENST00000344548 S1PR2O95136 353 aa11.16□□□□□ -0.62
CDC42-202ENST00000344548 GNG10P50151 68 aa11.16□□□□□ -0.62
CDC42-202ENST00000344548 SLC51BQ86UW2 128 aa11.16□□□□□ -0.62
CDC42-202ENST00000344548 SPAG16Q8N0X2 631 aa11.16□□□□□ -0.62
CDC42-202ENST00000344548 ZNF439Q8NDP4 499 aa11.16□□□□□ -0.62
CDC42-202ENST00000344548 TCTEX1D2Q8WW35 142 aa11.16□□□□□ -0.62
CDC42-202ENST00000344548 IL22RA2Q969J5 263 aa11.16□□□□□ -0.62
CDC42-202ENST00000344548 LINC00574Q9H8X3 128 aa11.16□□□□□ -0.62
CDC42-202ENST00000344548 LIN7CQ9NUP9 197 aaKnown RBP11.16□□□□□ -0.62
CDC42-202ENST00000344548 UBQLN2Q9UHD9 624 aa11.16□□□□□ -0.62
CDC42-202ENST00000344548 KANTRA0A1W2PQU2 76 aa11.16□□□□□ -0.62
CDC42-202ENST00000344548 ST8SIA3O43173 380 aa11.16□□□□□ -0.62
CDC42-202ENST00000344548 KRASP01116 189 aa11.16□□□□□ -0.62
CDC42-202ENST00000344548 RPL12P30050 165 aaKnown RBP11.16□□□□□ -0.62
CDC42-202ENST00000344548 DUTP33316 252 aaKnown RBP11.16□□□□□ -0.62
CDC42-202ENST00000344548 G6PCP35575 357 aa11.16□□□□□ -0.62
CDC42-202ENST00000344548 CDKN1AP38936 164 aa11.16□□□□□ -0.62
CDC42-202ENST00000344548 GPR12P47775 334 aa11.16□□□□□ -0.62
CDC42-202ENST00000344548 PRB3Q04118 309 aaPredicted RBP11.16□□□□□ -0.62
CDC42-202ENST00000344548 ZNF295-AS1Q8N0V1 137 aa11.16□□□□□ -0.62
CDC42-202ENST00000344548 ZNF251Q9BRH9 671 aa11.16□□□□□ -0.62
CDC42-202ENST00000344548 IDI2-AS1Q9NZ38 188 aa11.16□□□□□ -0.62
CDC42-202ENST00000344548 KAAG1Q9UBP8 84 aa11.16□□□□□ -0.62
CDC42-202ENST00000344548 POMT1Q9Y6A1 747 aa11.16□□□□□ -0.62
CDC42-202ENST00000344548 LINC00312Q9Y6C7 94 aa11.16□□□□□ -0.62
CDC42-202ENST00000344548 hADV38S2A0JD32 116 aa11.15□□□□□ -0.62
CDC42-202ENST00000344548 ZNF729A6NN14 1252 aaPredicted RBP11.15□□□□□ -0.62
CDC42-202ENST00000344548 F5H0A9 414 aaPredicted RBP11.15□□□□□ -0.62
CDC42-202ENST00000344548 NDUFB3O43676 98 aa11.15□□□□□ -0.62
CDC42-202ENST00000344548 IFNA7P01567 189 aa11.15□□□□□ -0.62
CDC42-202ENST00000344548 IGHV2-70P01814 119 aa11.15□□□□□ -0.62
CDC42-202ENST00000344548 C4BPBP20851 252 aa11.15□□□□□ -0.62
CDC42-202ENST00000344548 NKX2-1P43699 371 aaPredicted RBP11.15□□□□□ -0.62
CDC42-202ENST00000344548 ID3Q02535 119 aa11.15□□□□□ -0.62
CDC42-202ENST00000344548 ZNF841Q6ZN19 808 aa11.15□□□□□ -0.62
CDC42-202ENST00000344548 ZBTB34Q8NCN2 500 aa11.15□□□□□ -0.62
CDC42-202ENST00000344548 EDARADDQ8WWZ3 215 aa11.15□□□□□ -0.62
CDC42-202ENST00000344548 ARPC5LQ9BPX5 153 aa11.15□□□□□ -0.62
CDC42-202ENST00000344548 SMIM3Q9BZL3 60 aa11.15□□□□□ -0.62
CDC42-202ENST00000344548 CACNG5Q9UF02 275 aa11.15□□□□□ -0.62
CDC42-202ENST00000344548 C1QL1O75973 258 aa11.15□□□□□ -0.62
CDC42-202ENST00000344548 PET100P0DJ07 73 aa11.15□□□□□ -0.62
CDC42-202ENST00000344548 NHLH2Q02577 135 aa11.15□□□□□ -0.62
CDC42-202ENST00000344548 CRYBG3Q68DQ2 2970 aa11.15□□□□□ -0.62
CDC42-202ENST00000344548 DTX2Q86UW9 622 aa11.15□□□□□ -0.62
CDC42-202ENST00000344548 ABHD14AQ9BUJ0 271 aa11.15□□□□□ -0.62
CDC42-202ENST00000344548 RPUSD1Q9UJJ7 312 aaKnown RBP11.15□□□□□ -0.62
CDC42-202ENST00000344548 MED13LQ71F56 2210 aa11.14□□□□□ -0.63
CDC42-202ENST00000344548 SAA2-SAA4A0A096LPE2 208 aa11.14□□□□□ -0.63
CDC42-202ENST00000344548 DUXBA0A1W2PPF3 345 aa11.14□□□□□ -0.63
CDC42-202ENST00000344548 FAM24AA6NFZ4 105 aa11.14□□□□□ -0.63
CDC42-202ENST00000344548 M0R1X1 148 aa11.14□□□□□ -0.63
CDC42-202ENST00000344548 SSSCA1O60232 199 aa11.14□□□□□ -0.63
CDC42-202ENST00000344548 B3GALNT1O75752 331 aa11.14□□□□□ -0.63
CDC42-202ENST00000344548 SNAPC5O75971 98 aa11.14□□□□□ -0.63
CDC42-202ENST00000344548 SAA2P0DJI9 122 aaPredicted RBP11.14□□□□□ -0.63
CDC42-202ENST00000344548 AKR1C2P52895 323 aa11.14□□□□□ -0.63
CDC42-202ENST00000344548 PAX9P55771 341 aa11.14□□□□□ -0.63
CDC42-202ENST00000344548 LRRC10Q5BKY1 277 aa11.14□□□□□ -0.63
CDC42-202ENST00000344548 C11orf42Q8N5U0 333 aa11.14□□□□□ -0.63
CDC42-202ENST00000344548 GSX2Q9BZM3 304 aa11.14□□□□□ -0.63
CDC42-202ENST00000344548 VPS13CQ709C8 3753 aa11.14□□□□□ -0.63
CDC42-202ENST00000344548 P0C879 139 aa11.14□□□□□ -0.63
CDC42-202ENST00000344548 TMEM33P57088 247 aa11.14□□□□□ -0.63
CDC42-202ENST00000344548 RPL7L1Q6DKI1 246 aaKnown RBP11.14□□□□□ -0.63
CDC42-202ENST00000344548 ZNF714Q96N38 554 aa11.14□□□□□ -0.63
CDC42-202ENST00000344548 UBTD1Q9HAC8 227 aa11.14□□□□□ -0.63
CDC42-202ENST00000344548 WFDC1Q9HC57 220 aa11.14□□□□□ -0.63
CDC42-202ENST00000344548 E5RGE8 158 aa11.13□□□□□ -0.63
CDC42-202ENST00000344548 TEX46H3BTG2 121 aa11.13□□□□□ -0.63
CDC42-202ENST00000344548 CHST1O43916 411 aa11.13□□□□□ -0.63
CDC42-202ENST00000344548 DLX6P56179 175 aa11.13□□□□□ -0.63
CDC42-202ENST00000344548 MEF2CQ06413 473 aaPredicted RBP11.13□□□□□ -0.63
CDC42-202ENST00000344548 SMCO1Q147U7 214 aa11.13□□□□□ -0.63
CDC42-202ENST00000344548 NDUFA5Q16718 116 aa11.13□□□□□ -0.63
CDC42-202ENST00000344548 VKORC1L1Q8N0U8 176 aa11.13□□□□□ -0.63
CDC42-202ENST00000344548 LYG1Q8N1E2 194 aa11.13□□□□□ -0.63
CDC42-202ENST00000344548 ZNF843Q8N446 348 aa11.13□□□□□ -0.63
CDC42-202ENST00000344548 LSM10Q969L4 123 aaKnown RBP11.13□□□□□ -0.63
CDC42-202ENST00000344548 RAB1BQ9H0U4 201 aa11.13□□□□□ -0.63
CDC42-202ENST00000344548 FBXL17Q9UF56 701 aa11.13□□□□□ -0.63
CDC42-202ENST00000344548 NSG2Q9Y328 171 aa11.13□□□□□ -0.63
CDC42-202ENST00000344548 CSMD2Q7Z408 3487 aa11.13□□□□□ -0.63
CDC42-202ENST00000344548 FCGR3BO75015 233 aa11.12□□□□□ -0.63
CDC42-202ENST00000344548 NMBP08949 121 aa11.12□□□□□ -0.63
CDC42-202ENST00000344548 DAOP14920 347 aa11.12□□□□□ -0.63
CDC42-202ENST00000344548 THOC7Q6I9Y2 204 aaKnown RBP11.12□□□□□ -0.63
CDC42-202ENST00000344548 ZNF66Q6ZN08 573 aa11.12□□□□□ -0.63
CDC42-202ENST00000344548 RNASE11Q8TAA1 199 aaKnown RBP11.12□□□□□ -0.63
CDC42-202ENST00000344548 SCARB1Q8WTV0 552 aa11.12□□□□□ -0.63
CDC42-202ENST00000344548 CXorf58Q96LI9 332 aa11.12□□□□□ -0.63
CDC42-202ENST00000344548 HSD17B10Q99714 261 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms