RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 KDM6BO15054 1643 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 CTXN1P60606 82 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 RPL30P62888 115 aaKnown RBP3.28□□□□□ -1.88
SYNE2-202ENST00000344113 OXLD1Q5BKU9 147 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 ANKRD34AQ69YU3 496 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 GNRHR2Q96P88 292 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 IKZF5Q9H5V7 419 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 BTG4Q9NY30 223 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 IL36RNQ9UBH0 155 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 KIAA0040Q15053 153 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 TMEM219Q86XT9 240 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 METRNQ9UJH8 293 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 DAPP1Q9UN19 280 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 DICER1Q9UPY3 1922 aaKnown RBP3.28□□□□□ -1.88
SYNE2-202ENST00000344113 SNRPCP09234 159 aaKnown RBP3.28□□□□□ -1.88
SYNE2-202ENST00000344113 SOWAHAQ2M3V2 549 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 KISS1RQ969F8 398 aaPredicted RBP3.28□□□□□ -1.88
SYNE2-202ENST00000344113 MRPL32Q9BYC8 188 aaKnown RBP3.28□□□□□ -1.88
SYNE2-202ENST00000344113 C9orf118A6NHY6 69 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 SLC25A20O43772 301 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 ASAH2BP0C7U1 165 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 IER3P46695 156 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 PPP1R1AQ13522 171 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 RGMBQ6NW40 437 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 ZADH2Q8N4Q0 377 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 COQ2Q96H96 371 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 RREB1Q92766 1687 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 H2BFSP57053 126 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 ZNF117Q03924 483 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 FUT7Q11130 342 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 NCBP2-AS2Q69YL0 99 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 ANKRD26Q9UPS8 1709 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 MRPL18Q9H0U6 180 aaKnown RBP3.28□□□□□ -1.88
SYNE2-202ENST00000344113 PDLIM7Q9NR12 457 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 CXCL12P48061 93 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 KHDC1LQ5JSQ8 128 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 OR10AC1Q8NH08 325 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 EMID1Q96A84 441 aaPredicted RBP3.28□□□□□ -1.88
SYNE2-202ENST00000344113 RASL11BQ9BPW5 248 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 FAM234AQ9H0X4 552 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 CA10Q9NS85 328 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 LRP12Q9Y561 859 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 C2CD3Q4AC94 2353 aa3.28□□□□□ -1.88
SYNE2-202ENST00000344113 TNFRSF6BO95407 300 aa3.28□□□□□ -1.89
SYNE2-202ENST00000344113 F12P00748 615 aaPredicted RBP3.28□□□□□ -1.89
SYNE2-202ENST00000344113 CDC42EP5Q6NZY7 148 aa3.28□□□□□ -1.89
SYNE2-202ENST00000344113 UMODL1-AS1Q8N2C9 162 aa3.28□□□□□ -1.89
SYNE2-202ENST00000344113 OR51G1Q8NGK1 321 aa3.28□□□□□ -1.89
SYNE2-202ENST00000344113 RPS11P62280 158 aaKnown RBP eCLIP3.27□□□□□ -1.89
SYNE2-202ENST00000344113 GDF6Q6KF10 455 aaPredicted RBP3.27□□□□□ -1.89
SYNE2-202ENST00000344113 WDR83Q9BRX9 315 aaKnown RBP3.27□□□□□ -1.89
SYNE2-202ENST00000344113 SLC25A18Q9H1K4 315 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 S1PR5Q9H228 398 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 PLAGL1Q9UM63 463 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 SMIM28A0A1B0GU29 152 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 C17orf102A2RUQ5 167 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 ASPDHA6ND91 283 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 ALKBH3Q96Q83 286 aaPredicted RBP3.27□□□□□ -1.89
SYNE2-202ENST00000344113 CHST8Q9H2A9 424 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 TRAV8-1A0A0A6YYK1 113 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 GASTP01350 101 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 CD3DP04234 171 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 KIR2DL4Q99706 377 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 HOXA3O43365 443 aaPredicted RBP3.27□□□□□ -1.89
SYNE2-202ENST00000344113 TMEM91Q6ZNR0 172 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 C10orf111Q8N326 155 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 NFAM1Q8NET5 270 aaPredicted RBP3.27□□□□□ -1.89
SYNE2-202ENST00000344113 OR8A1Q8NGG7 326 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 GNG12Q9UBI6 72 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 MRPS36P82909 103 aaKnown RBP3.27□□□□□ -1.89
SYNE2-202ENST00000344113 DUSP2Q05923 314 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 C9orf50Q5SZB4 431 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 SPATA12Q7Z6I5 190 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 NXT2Q9NPJ8 142 aaKnown RBP3.27□□□□□ -1.89
SYNE2-202ENST00000344113 FER1L6-AS1Q8NA97 138 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 OCIAD1Q9NX40 245 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 CSPG4Q6UVK1 2322 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 PARP4Q9UKK3 1724 aaKnown RBP3.27□□□□□ -1.89
SYNE2-202ENST00000344113 K7EP34 96 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 WISP3O95389 354 aaPredicted RBP3.27□□□□□ -1.89
SYNE2-202ENST00000344113 DTX2Q86UW9 622 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 VSTM2LQ96N03 204 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 TMED7-TICAM2A0A0A6YYA0 188 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 COL8A1P27658 744 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 LINC00346Q8IVM7 164 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 PIFOQ8TCI5 191 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 PLA2G3Q9NZ20 509 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 ZNF443Q9Y2A4 671 aaPredicted RBP3.27□□□□□ -1.89
SYNE2-202ENST00000344113 NGFP01138 241 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 ZNF502Q8TBZ5 544 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 SCGB3A1Q96QR1 104 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 PPIAL4EA0A075B759 164 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 PPIAL4FP0DN26 164 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 SHISA6Q6ZSJ9 500 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 PPIAL4AQ9Y536 164 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 SRSF10O75494 262 aaKnown RBP3.27□□□□□ -1.89
SYNE2-202ENST00000344113 BTCP35070 178 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 GPR35Q9HC97 309 aa3.27□□□□□ -1.89
SYNE2-202ENST00000344113 N4BP2Q86UW6 1770 aaPredicted RBP3.27□□□□□ -1.89
SYNE2-202ENST00000344113 CENPVL3A0A0U1RRI6 287 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms