RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 TMED7Q9Y3B3 224 aa6.14□□□□□ -1.43
ZNF540-202ENST00000343599 P2RY10O00398 339 aa6.14□□□□□ -1.43
ZNF540-202ENST00000343599 MT-ATP6P00846 226 aa6.14□□□□□ -1.43
ZNF540-202ENST00000343599 EFNB2P52799 333 aa6.14□□□□□ -1.43
ZNF540-202ENST00000343599 GNB2P62879 340 aa6.14□□□□□ -1.43
ZNF540-202ENST00000343599 FOXF2Q12947 444 aa6.14□□□□□ -1.43
ZNF540-202ENST00000343599 ICAM4Q14773 271 aa6.14□□□□□ -1.43
ZNF540-202ENST00000343599 C2orf76Q3KRA6 126 aa6.14□□□□□ -1.43
ZNF540-202ENST00000343599 TP53I3Q53FA7 332 aa6.14□□□□□ -1.43
ZNF540-202ENST00000343599 UNQ5815/PRO19632Q6UWF5 114 aa6.14□□□□□ -1.43
ZNF540-202ENST00000343599 TOMM20LQ6UXN7 152 aa6.14□□□□□ -1.43
ZNF540-202ENST00000343599 ZNF66Q6ZN08 573 aa6.14□□□□□ -1.43
ZNF540-202ENST00000343599 ADAD2Q8NCV1 583 aaKnown RBP6.14□□□□□ -1.43
ZNF540-202ENST00000343599 OR4B1Q8NGF8 309 aa6.14□□□□□ -1.43
ZNF540-202ENST00000343599 OR1K1Q8NGR3 316 aa6.14□□□□□ -1.43
ZNF540-202ENST00000343599 OR11L1Q8NGX0 322 aa6.14□□□□□ -1.43
ZNF540-202ENST00000343599 C2orf50Q96LR7 162 aa6.14□□□□□ -1.43
ZNF540-202ENST00000343599 PDCD1LG2Q9BQ51 273 aa6.14□□□□□ -1.43
ZNF540-202ENST00000343599 ALKBH4Q9NXW9 302 aa6.14□□□□□ -1.43
ZNF540-202ENST00000343599 CLN8Q9UBY8 286 aa6.14□□□□□ -1.43
ZNF540-202ENST00000343599 UQCR10Q9UDW1 63 aa6.14□□□□□ -1.43
ZNF540-202ENST00000343599 C14orf166Q9Y224 244 aaKnown RBP6.14□□□□□ -1.43
ZNF540-202ENST00000343599 TPRP12270 2363 aaKnown RBP6.14□□□□□ -1.43
ZNF540-202ENST00000343599 G3V4G9 280 aa6.14□□□□□ -1.43
ZNF540-202ENST00000343599 HMGN4O00479 90 aa6.14□□□□□ -1.43
ZNF540-202ENST00000343599 RAMP3O60896 148 aa6.14□□□□□ -1.43
ZNF540-202ENST00000343599 CYB5AP00167 134 aa6.14□□□□□ -1.43
ZNF540-202ENST00000343599 LIPFP07098 398 aa6.14□□□□□ -1.43
ZNF540-202ENST00000343599 PFN1P07737 140 aaKnown RBP6.14□□□□□ -1.43
ZNF540-202ENST00000343599 MRPL3P09001 348 aaKnown RBP6.14□□□□□ -1.43
ZNF540-202ENST00000343599 EDN2P20800 178 aa6.14□□□□□ -1.43
ZNF540-202ENST00000343599 RPL12P30050 165 aaKnown RBP6.14□□□□□ -1.43
ZNF540-202ENST00000343599 RAB32Q13637 225 aa6.14□□□□□ -1.43
ZNF540-202ENST00000343599 FAM220AQ7Z4H9 259 aa6.14□□□□□ -1.43
ZNF540-202ENST00000343599 CYB561D1Q8N8Q1 229 aa6.14□□□□□ -1.43
ZNF540-202ENST00000343599 OR10S1Q8NGN2 331 aa6.14□□□□□ -1.43
ZNF540-202ENST00000343599 PTX4Q96A99 478 aa6.14□□□□□ -1.43
ZNF540-202ENST00000343599 CNRIP1Q96F85 164 aaPredicted RBP6.14□□□□□ -1.43
ZNF540-202ENST00000343599 FLRT3Q9NZU0 649 aa6.14□□□□□ -1.43
ZNF540-202ENST00000343599 KIAA1456Q9P272 454 aa6.14□□□□□ -1.43
ZNF540-202ENST00000343599 MRPS16Q9Y3D3 137 aaKnown RBP6.14□□□□□ -1.43
ZNF540-202ENST00000343599 E7EQL1 145 aa6.13□□□□□ -1.43
ZNF540-202ENST00000343599 FOXH1O75593 365 aa6.13□□□□□ -1.43
ZNF540-202ENST00000343599 APCP25054 2843 aa6.13□□□□□ -1.43
ZNF540-202ENST00000343599 FCGR2CP31995 323 aa6.13□□□□□ -1.43
ZNF540-202ENST00000343599 SOAT1P35610 550 aa6.13□□□□□ -1.43
ZNF540-202ENST00000343599 RAB11AP62491 216 aa6.13□□□□□ -1.43
ZNF540-202ENST00000343599 OR10W1Q8NGF6 305 aa6.13□□□□□ -1.43
ZNF540-202ENST00000343599 UBTD1Q9HAC8 227 aa6.13□□□□□ -1.43
ZNF540-202ENST00000343599 PAM16Q9Y3D7 125 aa6.13□□□□□ -1.43
ZNF540-202ENST00000343599 WIPI2Q9Y4P8 454 aa6.13□□□□□ -1.43
ZNF540-202ENST00000343599 HRKO00198 91 aa6.13□□□□□ -1.43
ZNF540-202ENST00000343599 PSG1P11464 419 aa6.13□□□□□ -1.43
ZNF540-202ENST00000343599 TNFRSF1AP19438 455 aa6.13□□□□□ -1.43
ZNF540-202ENST00000343599 P2RY1P47900 373 aa6.13□□□□□ -1.43
ZNF540-202ENST00000343599 ZNF92Q03936 586 aa6.13□□□□□ -1.43
ZNF540-202ENST00000343599 OR4A47Q6IF82 309 aa6.13□□□□□ -1.43
ZNF540-202ENST00000343599 SPSB3Q6PJ21 355 aa6.13□□□□□ -1.43
ZNF540-202ENST00000343599 SHISA6Q6ZSJ9 500 aa6.13□□□□□ -1.43
ZNF540-202ENST00000343599 ZNF550Q7Z398 422 aa6.13□□□□□ -1.43
ZNF540-202ENST00000343599 CENPVQ7Z7K6 275 aaPredicted RBP6.13□□□□□ -1.43
ZNF540-202ENST00000343599 LRP11Q86VZ4 500 aa6.13□□□□□ -1.43
ZNF540-202ENST00000343599 WFDC8Q8IUA0 241 aa6.13□□□□□ -1.43
ZNF540-202ENST00000343599 ZNF679Q8IYX0 411 aa6.13□□□□□ -1.43
ZNF540-202ENST00000343599 Q8N2B8 174 aa6.13□□□□□ -1.43
ZNF540-202ENST00000343599 METTL27Q8N6F8 245 aaPredicted RBP6.13□□□□□ -1.43
ZNF540-202ENST00000343599 OR13C9Q8NGT0 318 aa6.13□□□□□ -1.43
ZNF540-202ENST00000343599 OR2T27Q8NH04 317 aa6.13□□□□□ -1.43
ZNF540-202ENST00000343599 DYRK2Q92630 601 aa6.13□□□□□ -1.43
ZNF540-202ENST00000343599 TMEM54Q969K7 222 aa6.13□□□□□ -1.43
ZNF540-202ENST00000343599 MRPL24Q96A35 216 aaKnown RBP6.13□□□□□ -1.43
ZNF540-202ENST00000343599 TMEM186Q96B77 213 aa6.13□□□□□ -1.43
ZNF540-202ENST00000343599 APH1AQ96BI3 265 aa6.13□□□□□ -1.43
ZNF540-202ENST00000343599 DNAJA3Q96EY1 480 aa6.13□□□□□ -1.43
ZNF540-202ENST00000343599 AJUBAQ96IF1 538 aa6.13□□□□□ -1.43
ZNF540-202ENST00000343599 CITED1Q99966 193 aa6.13□□□□□ -1.43
ZNF540-202ENST00000343599 BET1LQ9NYM9 111 aa6.13□□□□□ -1.43
ZNF540-202ENST00000343599 PLEK2Q9NYT0 353 aa6.13□□□□□ -1.43
ZNF540-202ENST00000343599 TRBV5-5A0A0J9YX44 114 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 SYNGR3O43761 229 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 TYMSP04818 313 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 CT62P0C5K7 136 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 MDKP21741 143 aaPredicted RBP6.12□□□□□ -1.43
ZNF540-202ENST00000343599 IGHV1-2P23083 117 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 CCL20P78556 96 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 PAX2Q02962 417 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 ZNF260Q3ZCT1 412 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 DGAT2L6Q6ZPD8 337 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 Q6ZVH6 145 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 BATF2Q8N1L9 274 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 MUC15Q8N387 334 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 OR52L2PQ8NGH6 319 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 LINC01560Q8TB33 94 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 HS3ST6Q96QI5 342 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 WDR45Q9Y484 360 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 WSB1Q9Y6I7 421 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 DSPP15924 2871 aaKnown RBP6.12□□□□□ -1.43
ZNF540-202ENST00000343599 ANK3Q12955 4377 aaKnown RBP6.12□□□□□ -1.43
ZNF540-202ENST00000343599 NBPF19A0A087WUL8 3843 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 BORCS7-ASMTA0A0B4J1R7 106 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms