RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 IER3P46695 156 aa12.59□□□□□ -0.39
CLCN1-201ENST00000343257 EDDM3BP56851 147 aa12.59□□□□□ -0.39
CLCN1-201ENST00000343257 PRDX4Q13162 271 aa12.59□□□□□ -0.39
CLCN1-201ENST00000343257 TMEM42Q69YG0 159 aa12.59□□□□□ -0.39
CLCN1-201ENST00000343257 ZNF808Q8N4W9 903 aaPredicted RBP12.59□□□□□ -0.39
CLCN1-201ENST00000343257 PSMF1Q92530 271 aa12.59□□□□□ -0.39
CLCN1-201ENST00000343257 WNT5BQ9H1J7 359 aa12.59□□□□□ -0.39
CLCN1-201ENST00000343257 C20orf202A1L168 122 aa12.59□□□□□ -0.39
CLCN1-201ENST00000343257 TRAPPC2LH3BP13 241 aa12.59□□□□□ -0.39
CLCN1-201ENST00000343257 MRPS21P82921 87 aaKnown RBP12.59□□□□□ -0.39
CLCN1-201ENST00000343257 ZNF324BQ6AW86 544 aaPredicted RBP12.59□□□□□ -0.39
CLCN1-201ENST00000343257 YRDCQ86U90 279 aaKnown RBP12.59□□□□□ -0.39
CLCN1-201ENST00000343257 WNT10AQ9GZT5 417 aa12.59□□□□□ -0.39
CLCN1-201ENST00000343257 FBXL7Q9UJT9 491 aa12.59□□□□□ -0.39
CLCN1-201ENST00000343257 F6UZH7 168 aa12.58□□□□□ -0.4
CLCN1-201ENST00000343257 HINT1P49773 126 aaPredicted RBP12.58□□□□□ -0.4
CLCN1-201ENST00000343257 ZNF585BQ52M93 769 aa12.58□□□□□ -0.4
CLCN1-201ENST00000343257 TEX43Q6ZNM6 134 aa12.58□□□□□ -0.4
CLCN1-201ENST00000343257 PLXDC1Q8IUK5 500 aa12.58□□□□□ -0.4
CLCN1-201ENST00000343257 OR1L6Q8NGR2 347 aa12.58□□□□□ -0.4
CLCN1-201ENST00000343257 C20orf144Q9BQM9 153 aa12.58□□□□□ -0.4
CLCN1-201ENST00000343257 MRPL18Q9H0U6 180 aaKnown RBP12.58□□□□□ -0.4
CLCN1-201ENST00000343257 MMP17Q9ULZ9 603 aa12.58□□□□□ -0.4
CLCN1-201ENST00000343257 NBEAQ8NFP9 2946 aa12.58□□□□□ -0.4
CLCN1-201ENST00000343257 COL6A3P12111 3177 aa12.58□□□□□ -0.4
CLCN1-201ENST00000343257 CCL25O15444 150 aa12.58□□□□□ -0.4
CLCN1-201ENST00000343257 YPEL1O60688 119 aa12.58□□□□□ -0.4
CLCN1-201ENST00000343257 OR5G3P0C626 314 aa12.58□□□□□ -0.4
CLCN1-201ENST00000343257 CCL3P10147 92 aa12.58□□□□□ -0.4
CLCN1-201ENST00000343257 Q6ZN92 141 aa12.58□□□□□ -0.4
CLCN1-201ENST00000343257 Q6ZSR3 168 aa12.58□□□□□ -0.4
CLCN1-201ENST00000343257 KMT5CQ86Y97 462 aa12.58□□□□□ -0.4
CLCN1-201ENST00000343257 FGFRL1Q8N441 504 aa12.58□□□□□ -0.4
CLCN1-201ENST00000343257 SLC35E1Q96K37 410 aa12.58□□□□□ -0.4
CLCN1-201ENST00000343257 YPEL2Q96QA6 119 aa12.58□□□□□ -0.4
CLCN1-201ENST00000343257 MTIF3Q9H2K0 278 aaKnown RBP12.58□□□□□ -0.4
CLCN1-201ENST00000343257 ZNF703Q9H7S9 590 aaPredicted RBP12.58□□□□□ -0.4
CLCN1-201ENST00000343257 ZFP30Q9Y2G7 519 aa12.58□□□□□ -0.4
CLCN1-201ENST00000343257 EPOPA6NHQ4 379 aa12.57□□□□□ -0.4
CLCN1-201ENST00000343257 SPATA45Q537H7 98 aa12.57□□□□□ -0.4
CLCN1-201ENST00000343257 ANKRD39Q53RE8 183 aa12.57□□□□□ -0.4
CLCN1-201ENST00000343257 SFRP2Q96HF1 295 aa12.57□□□□□ -0.4
CLCN1-201ENST00000343257 OR2H1Q9GZK4 316 aa12.57□□□□□ -0.4
CLCN1-201ENST00000343257 FSCN3Q9NQT6 498 aa12.57□□□□□ -0.4
CLCN1-201ENST00000343257 TMEM38BQ9NVV0 291 aa12.57□□□□□ -0.4
CLCN1-201ENST00000343257 IL36GQ9NZH8 169 aa12.57□□□□□ -0.4
CLCN1-201ENST00000343257 DIRC3C9JPN6 131 aa12.57□□□□□ -0.4
CLCN1-201ENST00000343257 FCN1O00602 326 aa12.57□□□□□ -0.4
CLCN1-201ENST00000343257 DUX1O43812 170 aa12.57□□□□□ -0.4
CLCN1-201ENST00000343257 ZG16O60844 167 aa12.57□□□□□ -0.4
CLCN1-201ENST00000343257 RAMP3O60896 148 aa12.57□□□□□ -0.4
CLCN1-201ENST00000343257 COX5AP20674 150 aa12.57□□□□□ -0.4
CLCN1-201ENST00000343257 LCN2P80188 198 aa12.57□□□□□ -0.4
CLCN1-201ENST00000343257 UNQ5815/PRO19632Q6UWF5 114 aa12.57□□□□□ -0.4
CLCN1-201ENST00000343257 AAED1Q7RTV5 226 aa12.57□□□□□ -0.4
CLCN1-201ENST00000343257 MKXQ8IYA7 352 aa12.57□□□□□ -0.4
CLCN1-201ENST00000343257 GDF9O60383 454 aa12.57□□□□□ -0.4
CLCN1-201ENST00000343257 NDUFB8O95169 186 aa12.57□□□□□ -0.4
CLCN1-201ENST00000343257 CDC34P49427 236 aaPredicted RBP12.57□□□□□ -0.4
CLCN1-201ENST00000343257 LINC00205P59089 165 aa12.57□□□□□ -0.4
CLCN1-201ENST00000343257 HLA-DRB5Q30154 266 aa12.57□□□□□ -0.4
CLCN1-201ENST00000343257 CPEB3Q8NE35 698 aaKnown RBP12.57□□□□□ -0.4
CLCN1-201ENST00000343257 FOXB1Q99853 325 aa12.57□□□□□ -0.4
CLCN1-201ENST00000343257 RNF24Q9Y225 148 aa12.57□□□□□ -0.4
CLCN1-201ENST00000343257 USF3Q68DE3 2245 aa12.56□□□□□ -0.4
CLCN1-201ENST00000343257 TRBV20OR9-2A0A075B6H5 130 aa12.56□□□□□ -0.4
CLCN1-201ENST00000343257 CEACAM8P31997 349 aaPredicted RBP12.56□□□□□ -0.4
CLCN1-201ENST00000343257 CCR5P51681 352 aa12.56□□□□□ -0.4
CLCN1-201ENST00000343257 SIGLECL1Q8N7X8 197 aa12.56□□□□□ -0.4
CLCN1-201ENST00000343257 CBR3O75828 277 aa12.56□□□□□ -0.4
CLCN1-201ENST00000343257 IGHEP01854 428 aa12.56□□□□□ -0.4
CLCN1-201ENST00000343257 VEGFBP49765 207 aa12.56□□□□□ -0.4
CLCN1-201ENST00000343257 LHX2P50458 406 aa12.56□□□□□ -0.4
CLCN1-201ENST00000343257 FGF12P61328 243 aa12.56□□□□□ -0.4
CLCN1-201ENST00000343257 MAJINQ3KP22 176 aa12.56□□□□□ -0.4
CLCN1-201ENST00000343257 FBXW9Q5XUX1 488 aa12.56□□□□□ -0.4
CLCN1-201ENST00000343257 TMEM144Q7Z5S9 345 aa12.56□□□□□ -0.4
CLCN1-201ENST00000343257 C7orf61Q8IZ16 206 aa12.56□□□□□ -0.4
CLCN1-201ENST00000343257 CHCHD2Q9Y6H1 151 aaPredicted RBP12.56□□□□□ -0.4
CLCN1-201ENST00000343257 FREM1Q5H8C1 2179 aa12.56□□□□□ -0.4
CLCN1-201ENST00000343257 SCO2A0A1W2PP80 73 aa12.55□□□□□ -0.4
CLCN1-201ENST00000343257 SLC25A6P12236 298 aa12.55□□□□□ -0.4
CLCN1-201ENST00000343257 S100A7P31151 101 aa12.55□□□□□ -0.4
CLCN1-201ENST00000343257 CLDN15P56746 228 aa12.55□□□□□ -0.4
CLCN1-201ENST00000343257 SUMO1P63165 101 aaKnown RBP12.55□□□□□ -0.4
CLCN1-201ENST00000343257 COTL1Q14019 142 aa12.55□□□□□ -0.4
CLCN1-201ENST00000343257 KRTCAP3Q53RY4 240 aa12.55□□□□□ -0.4
CLCN1-201ENST00000343257 ALKBH2Q6NS38 261 aa12.55□□□□□ -0.4
CLCN1-201ENST00000343257 OR6C6A6NF89 314 aa12.55□□□□□ -0.4
CLCN1-201ENST00000343257 SNURFLB1AK76 121 aa12.55□□□□□ -0.4
CLCN1-201ENST00000343257 CXCL13O43927 109 aa12.55□□□□□ -0.4
CLCN1-201ENST00000343257 ARL6IP6Q8N6S5 226 aa12.55□□□□□ -0.4
CLCN1-201ENST00000343257 OR10P1Q8NGE3 313 aa12.55□□□□□ -0.4
CLCN1-201ENST00000343257 OCC1Q8TAD7 63 aa12.55□□□□□ -0.4
CLCN1-201ENST00000343257 NPCDR1Q9BY65 106 aa12.55□□□□□ -0.4
CLCN1-201ENST00000343257 ZNF552Q9H707 407 aaPredicted RBP12.55□□□□□ -0.4
CLCN1-201ENST00000343257 MLNRO43193 412 aa12.55□□□□□ -0.4
CLCN1-201ENST00000343257 SCRG1O75711 98 aa12.55□□□□□ -0.4
CLCN1-201ENST00000343257 IGLV2-14P01704 120 aa12.55□□□□□ -0.4
CLCN1-201ENST00000343257 CTXN2P0C2S0 81 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms