RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 PPYP01298 95 aa15.47■□□□□ 0.07
SMAD4-201ENST00000342988 ZNF252P-AS1Q0IIN9 211 aa15.47■□□□□ 0.07
SMAD4-201ENST00000342988 A0A0U1RQS6 177 aa15.47■□□□□ 0.07
SMAD4-201ENST00000342988 KRTCAP3Q53RY4 240 aa15.47■□□□□ 0.07
SMAD4-201ENST00000342988 Q6ZSR9 355 aa15.47■□□□□ 0.07
SMAD4-201ENST00000342988 SIGMAR1Q99720 223 aa15.47■□□□□ 0.07
SMAD4-201ENST00000342988 METTL1Q9UBP6 276 aaKnown RBP15.47■□□□□ 0.07
SMAD4-201ENST00000342988 RRHO14718 337 aa15.46■□□□□ 0.07
SMAD4-201ENST00000342988 FGF17O60258 216 aa15.46■□□□□ 0.07
SMAD4-201ENST00000342988 PRF1P14222 555 aa15.46■□□□□ 0.07
SMAD4-201ENST00000342988 GLULP15104 373 aa15.46■□□□□ 0.07
SMAD4-201ENST00000342988 FOXF1Q12946 379 aa15.46■□□□□ 0.07
SMAD4-201ENST00000342988 TREM2Q9NZC2 230 aa15.46■□□□□ 0.07
SMAD4-201ENST00000342988 CLDN16Q9Y5I7 305 aa15.46■□□□□ 0.07
SMAD4-201ENST00000342988 CBLN4Q9NTU7 201 aa15.46■□□□□ 0.07
SMAD4-201ENST00000342988 TCTN3Q6NUS6 607 aa15.46■□□□□ 0.07
SMAD4-201ENST00000342988 PQLC2Q6ZP29 291 aa15.46■□□□□ 0.07
SMAD4-201ENST00000342988 ALX4Q9H161 411 aaPredicted RBP15.46■□□□□ 0.07
SMAD4-201ENST00000342988 WNT1P04628 370 aa15.46■□□□□ 0.06
SMAD4-201ENST00000342988 PRR35P0CG20 571 aa15.46■□□□□ 0.06
SMAD4-201ENST00000342988 ASCL4Q6XD76 172 aa15.46■□□□□ 0.06
SMAD4-201ENST00000342988 NTMQ9P121 344 aa15.46■□□□□ 0.06
SMAD4-201ENST00000342988 ADRA2AP08913 450 aa15.45■□□□□ 0.06
SMAD4-201ENST00000342988 Q5PR19 223 aa15.45■□□□□ 0.06
SMAD4-201ENST00000342988 SHISA5Q8N114 240 aa15.45■□□□□ 0.06
SMAD4-201ENST00000342988 OR2Y1Q8NGV0 311 aa15.45■□□□□ 0.06
SMAD4-201ENST00000342988 ABHD1Q96SE0 405 aa15.45■□□□□ 0.06
SMAD4-201ENST00000342988 PLSCR2Q9NRY7 297 aa15.45■□□□□ 0.06
SMAD4-201ENST00000342988 CGB1A6NKQ9 187 aa15.45■□□□□ 0.06
SMAD4-201ENST00000342988 C1orf185Q5T7R7 199 aa15.45■□□□□ 0.06
SMAD4-201ENST00000342988 TMEM171Q8WVE6 324 aa15.45■□□□□ 0.06
SMAD4-201ENST00000342988 PXMP4Q9Y6I8 212 aa15.45■□□□□ 0.06
SMAD4-201ENST00000342988 SLURP2P0DP57 97 aa15.45■□□□□ 0.06
SMAD4-201ENST00000342988 WDR38Q5JTN6 314 aa15.45■□□□□ 0.06
SMAD4-201ENST00000342988 FAM209BQ5JX69 171 aa15.45■□□□□ 0.06
SMAD4-201ENST00000342988 OR51M1Q9H341 326 aa15.45■□□□□ 0.06
SMAD4-201ENST00000342988 THAP10Q9P2Z0 257 aaPredicted RBP15.45■□□□□ 0.06
SMAD4-201ENST00000342988 TRBV20OR9-2A0A075B6H5 130 aa15.45■□□□□ 0.06
SMAD4-201ENST00000342988 IFNL4K9M1U5 179 aa15.45■□□□□ 0.06
SMAD4-201ENST00000342988 CBLN2Q8IUK8 224 aa15.45■□□□□ 0.06
SMAD4-201ENST00000342988 CYB561D1Q8N8Q1 229 aa15.45■□□□□ 0.06
SMAD4-201ENST00000342988 NT5CQ8TCD5 201 aa15.45■□□□□ 0.06
SMAD4-201ENST00000342988 TEX37Q96LM6 180 aa15.45■□□□□ 0.06
SMAD4-201ENST00000342988 ORAOV1Q8WV07 137 aa15.45■□□□□ 0.06
SMAD4-201ENST00000342988 RTN4RQ9BZR6 473 aa15.45■□□□□ 0.06
SMAD4-201ENST00000342988 ZNF32P17041 273 aa15.44■□□□□ 0.06
SMAD4-201ENST00000342988 TMEM50BP56557 158 aa15.44■□□□□ 0.06
SMAD4-201ENST00000342988 RNF7Q9UBF6 113 aa15.44■□□□□ 0.06
SMAD4-201ENST00000342988 FAM27D1Q5T7N8 215 aa15.44■□□□□ 0.06
SMAD4-201ENST00000342988 TBL2Q9Y4P3 447 aaKnown RBP15.44■□□□□ 0.06
SMAD4-201ENST00000342988 IGHV3-13P01766 116 aa15.44■□□□□ 0.06
SMAD4-201ENST00000342988 IGHV3-7P01780 117 aa15.44■□□□□ 0.06
SMAD4-201ENST00000342988 HPRT1P00492 218 aa15.44■□□□□ 0.06
SMAD4-201ENST00000342988 TMEM106BQ9NUM4 274 aa15.44■□□□□ 0.06
SMAD4-201ENST00000342988 GAPTQ8N292 157 aa15.44■□□□□ 0.06
SMAD4-201ENST00000342988 ELF5Q9UKW6 265 aaPredicted RBP15.44■□□□□ 0.06
SMAD4-201ENST00000342988 TNFSF18Q9UNG2 199 aa15.44■□□□□ 0.06
SMAD4-201ENST00000342988 RPL31P62899 125 aaKnown RBP15.44■□□□□ 0.06
SMAD4-201ENST00000342988 CADM4Q8NFZ8 388 aa15.44■□□□□ 0.06
SMAD4-201ENST00000342988 SF3B6Q9Y3B4 125 aaKnown RBP15.44■□□□□ 0.06
SMAD4-201ENST00000342988 CRYBG1Q9Y4K1 1723 aa15.43■□□□□ 0.06
SMAD4-201ENST00000342988 EWSR1Q01844 656 aaKnown RBP eCLIP15.43■□□□□ 0.06
SMAD4-201ENST00000342988 NUBPLQ8TB37 319 aa15.43■□□□□ 0.06
SMAD4-201ENST00000342988 APOMO95445 188 aa15.43■□□□□ 0.06
SMAD4-201ENST00000342988 CYB5R2Q6BCY4 276 aa15.43■□□□□ 0.06
SMAD4-201ENST00000342988 ZNF793Q6ZN11 406 aa15.43■□□□□ 0.06
SMAD4-201ENST00000342988 TTC9CQ8N5M4 171 aa15.43■□□□□ 0.06
SMAD4-201ENST00000342988 ANKRD20A5PA0PJZ0 165 aa15.43■□□□□ 0.06
SMAD4-201ENST00000342988 DPRXA6NFQ7 191 aa15.43■□□□□ 0.06
SMAD4-201ENST00000342988 ZNF117Q03924 483 aa15.43■□□□□ 0.06
SMAD4-201ENST00000342988 DCTN5Q9BTE1 182 aa15.43■□□□□ 0.06
SMAD4-201ENST00000342988 TRAV8-6A0A0B4J262 113 aa15.43■□□□□ 0.06
SMAD4-201ENST00000342988 PRR7Q8TB68 274 aa15.43■□□□□ 0.06
SMAD4-201ENST00000342988 IL36RNQ9UBH0 155 aa15.43■□□□□ 0.06
SMAD4-201ENST00000342988 COL16A1Q07092 1604 aaPredicted RBP15.43■□□□□ 0.06
SMAD4-201ENST00000342988 CNOT1A5YKK6 2376 aaKnown RBP15.43■□□□□ 0.06
SMAD4-201ENST00000342988 ARHGAP21Q5T5U3 1957 aa15.43■□□□□ 0.06
SMAD4-201ENST00000342988 TRAV12-3A0A0B4J271 114 aa15.43■□□□□ 0.06
SMAD4-201ENST00000342988 CD1AP06126 327 aa15.43■□□□□ 0.06
SMAD4-201ENST00000342988 FRRS1LQ9P0K9 344 aa15.43■□□□□ 0.06
SMAD4-201ENST00000342988 LILRA5A6NI73 299 aa15.42■□□□□ 0.06
SMAD4-201ENST00000342988 PTPMT1Q8WUK0 201 aaPredicted RBP15.42■□□□□ 0.06
SMAD4-201ENST00000342988 WNK1Q9H4A3 2382 aa15.42■□□□□ 0.06
SMAD4-201ENST00000342988 SH2D5Q6ZV89 423 aa15.42■□□□□ 0.06
SMAD4-201ENST00000342988 QTRT1Q9BXR0 403 aaKnown RBP15.42■□□□□ 0.06
SMAD4-201ENST00000342988 NPIPB8E9PQR5 432 aa15.42■□□□□ 0.06
SMAD4-201ENST00000342988 NPIPB9F8W1W9 429 aa15.42■□□□□ 0.06
SMAD4-201ENST00000342988 NPIPB7O75200 414 aa15.42■□□□□ 0.06
SMAD4-201ENST00000342988 CTLA4P16410 223 aa15.42■□□□□ 0.06
SMAD4-201ENST00000342988 LSM6P62312 80 aaKnown RBP15.42■□□□□ 0.06
SMAD4-201ENST00000342988 ELOVL5Q9NYP7 299 aa15.42■□□□□ 0.06
SMAD4-201ENST00000342988 ATP5G2Q06055 141 aa15.42■□□□□ 0.06
SMAD4-201ENST00000342988 SNAI3Q3KNW1 292 aa15.42■□□□□ 0.06
SMAD4-201ENST00000342988 PCGF1Q9BSM1 259 aa15.42■□□□□ 0.06
SMAD4-201ENST00000342988 ZBP1Q9H171 429 aa15.42■□□□□ 0.06
SMAD4-201ENST00000342988 WSB2Q9NYS7 404 aaPredicted RBP15.42■□□□□ 0.06
SMAD4-201ENST00000342988 GAPDHP04406 335 aaKnown RBP15.42■□□□□ 0.06
SMAD4-201ENST00000342988 ZNF98A6NK75 572 aa15.42■□□□□ 0.06
SMAD4-201ENST00000342988 LMO7DNF2Z398 122 aa15.42■□□□□ 0.06
SMAD4-201ENST00000342988 ZFPL1O95159 310 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms