RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 F2Z2F3 143 aa15.73■□□□□ 0.11
SMPD1-201ENST00000342245 KIR2DS3K7RE56 304 aa15.73■□□□□ 0.11
SMPD1-201ENST00000342245 CORTO00230 105 aa15.73■□□□□ 0.11
SMPD1-201ENST00000342245 TNFSF15O95150 251 aa15.73■□□□□ 0.11
SMPD1-201ENST00000342245 TLE1Q04724 770 aa15.73■□□□□ 0.11
SMPD1-201ENST00000342245 KIR2DS5Q14953 304 aa15.73■□□□□ 0.11
SMPD1-201ENST00000342245 DCAF12Q5T6F0 453 aa15.73■□□□□ 0.11
SMPD1-201ENST00000342245 ABHD3Q8WU67 409 aa15.73■□□□□ 0.11
SMPD1-201ENST00000342245 FAM131CQ96AQ9 280 aa15.73■□□□□ 0.11
SMPD1-201ENST00000342245 SOHLH2Q9NX45 425 aa15.73■□□□□ 0.11
SMPD1-201ENST00000342245 COPS7AQ9UBW8 275 aa15.73■□□□□ 0.11
SMPD1-201ENST00000342245 IGKV1-27A0A075B6S5 117 aa15.72■□□□□ 0.11
SMPD1-201ENST00000342245 IGKV1D-13A0A0B4J2D9 117 aa15.72■□□□□ 0.11
SMPD1-201ENST00000342245 M0R135 149 aa15.72■□□□□ 0.11
SMPD1-201ENST00000342245 IGKV1-13P0DP09 117 aa15.72■□□□□ 0.11
SMPD1-201ENST00000342245 PPP1CAP62136 330 aa15.72■□□□□ 0.11
SMPD1-201ENST00000342245 RPEL1Q2QD12 228 aa15.72■□□□□ 0.11
SMPD1-201ENST00000342245 RAB1CQ92928 201 aa15.72■□□□□ 0.11
SMPD1-201ENST00000342245 ZNF799Q96GE5 643 aa15.72■□□□□ 0.11
SMPD1-201ENST00000342245 MTIF3Q9H2K0 278 aaKnown RBP15.72■□□□□ 0.11
SMPD1-201ENST00000342245 CLEC1BQ9P126 229 aa15.72■□□□□ 0.11
SMPD1-201ENST00000342245 LY96Q9Y6Y9 160 aa15.72■□□□□ 0.11
SMPD1-201ENST00000342245 NAPSAO96009 420 aa15.72■□□□□ 0.11
SMPD1-201ENST00000342245 IER3P46695 156 aa15.72■□□□□ 0.11
SMPD1-201ENST00000342245 CDC34P49427 236 aaPredicted RBP15.72■□□□□ 0.11
SMPD1-201ENST00000342245 TAX1BP3O14907 124 aa15.71■□□□□ 0.11
SMPD1-201ENST00000342245 PMCHP20382 165 aa15.71■□□□□ 0.11
SMPD1-201ENST00000342245 SRD5A2P31213 254 aa15.71■□□□□ 0.11
SMPD1-201ENST00000342245 FUT6P51993 359 aa15.71■□□□□ 0.11
SMPD1-201ENST00000342245 CLDN17P56750 224 aa15.71■□□□□ 0.11
SMPD1-201ENST00000342245 HTD2P86397 168 aa15.71■□□□□ 0.11
SMPD1-201ENST00000342245 CARD17Q5XLA6 110 aa15.71■□□□□ 0.11
SMPD1-201ENST00000342245 OR10P1Q8NGE3 313 aa15.71■□□□□ 0.11
SMPD1-201ENST00000342245 OR52L2PQ8NGH6 319 aa15.71■□□□□ 0.11
SMPD1-201ENST00000342245 OXGR1Q96P68 337 aa15.71■□□□□ 0.11
SMPD1-201ENST00000342245 MEGF9Q9H1U4 602 aa15.71■□□□□ 0.11
SMPD1-201ENST00000342245 CAPZBP47756 277 aa15.71■□□□□ 0.1
SMPD1-201ENST00000342245 CLDN15P56746 228 aa15.71■□□□□ 0.1
SMPD1-201ENST00000342245 PSG4Q00888 419 aa15.71■□□□□ 0.1
SMPD1-201ENST00000342245 KRTCAP3Q53RY4 240 aa15.71■□□□□ 0.1
SMPD1-201ENST00000342245 APOBEC3DQ96AK3 386 aaPredicted RBP15.71■□□□□ 0.1
SMPD1-201ENST00000342245 WNT10AQ9GZT5 417 aa15.71■□□□□ 0.1
SMPD1-201ENST00000342245 THADAQ6YHU6 1953 aa15.7■□□□□ 0.1
SMPD1-201ENST00000342245 IGKV1-12A0A0C4DH73 117 aa15.7■□□□□ 0.1
SMPD1-201ENST00000342245 CA2P00918 260 aa15.7■□□□□ 0.1
SMPD1-201ENST00000342245 IGKV1D-12P01611 117 aa15.7■□□□□ 0.1
SMPD1-201ENST00000342245 ZNF83P51522 516 aa15.7■□□□□ 0.1
SMPD1-201ENST00000342245 MLF1P58340 268 aa15.7■□□□□ 0.1
SMPD1-201ENST00000342245 Q6ZRM9 215 aa15.7■□□□□ 0.1
SMPD1-201ENST00000342245 FAM58AQ8N1B3 248 aa15.7■□□□□ 0.1
SMPD1-201ENST00000342245 OR2M3Q8NG83 312 aa15.7■□□□□ 0.1
SMPD1-201ENST00000342245 TMEM204Q9BSN7 226 aa15.7■□□□□ 0.1
SMPD1-201ENST00000342245 IGKV3D-11A0A0A0MRZ8 115 aa15.7■□□□□ 0.1
SMPD1-201ENST00000342245 CD46P15529 392 aa15.7■□□□□ 0.1
SMPD1-201ENST00000342245 ZNF114Q8NC26 417 aa15.7■□□□□ 0.1
SMPD1-201ENST00000342245 THAP3Q8WTV1 239 aaPredicted RBP15.7■□□□□ 0.1
SMPD1-201ENST00000342245 SHANK1Q9Y566 2161 aa15.69■□□□□ 0.1
SMPD1-201ENST00000342245 GAGE12BA1L429 117 aa15.69■□□□□ 0.1
SMPD1-201ENST00000342245 OR7C1O76099 320 aaPredicted RBP15.69■□□□□ 0.1
SMPD1-201ENST00000342245 TNFP01375 233 aa15.69■□□□□ 0.1
SMPD1-201ENST00000342245 PSG2P11465 335 aa15.69■□□□□ 0.1
SMPD1-201ENST00000342245 CCR5P51681 352 aa15.69■□□□□ 0.1
SMPD1-201ENST00000342245 GFRA1P56159 465 aa15.69■□□□□ 0.1
SMPD1-201ENST00000342245 ZNF324BQ6AW86 544 aaPredicted RBP15.69■□□□□ 0.1
SMPD1-201ENST00000342245 VASH2Q86V25 355 aa15.69■□□□□ 0.1
SMPD1-201ENST00000342245 DEFB125Q8N687 156 aa15.69■□□□□ 0.1
SMPD1-201ENST00000342245 ZNF441Q8N8Z8 693 aa15.69■□□□□ 0.1
SMPD1-201ENST00000342245 OR4S2Q8NH73 311 aa15.69■□□□□ 0.1
SMPD1-201ENST00000342245 ZNF501Q96CX3 271 aaPredicted RBP15.69■□□□□ 0.1
SMPD1-201ENST00000342245 CD207Q9UJ71 328 aa15.69■□□□□ 0.1
SMPD1-201ENST00000342245 ZNF391Q9UJN7 358 aa15.69■□□□□ 0.1
SMPD1-201ENST00000342245 ATG2BQ96BY7 2078 aa15.69■□□□□ 0.1
SMPD1-201ENST00000342245 C9orf172C9J069 976 aa15.69■□□□□ 0.1
SMPD1-201ENST00000342245 H3BML4 177 aa15.69■□□□□ 0.1
SMPD1-201ENST00000342245 MRPL49Q13405 166 aaKnown RBP15.69■□□□□ 0.1
SMPD1-201ENST00000342245 TMEM42Q69YG0 159 aa15.69■□□□□ 0.1
SMPD1-201ENST00000342245 GPHA2Q96T91 129 aa15.69■□□□□ 0.1
SMPD1-201ENST00000342245 ATP23Q9Y6H3 246 aa15.69■□□□□ 0.1
SMPD1-201ENST00000342245 H0YJW9 148 aa15.68■□□□□ 0.1
SMPD1-201ENST00000342245 SCTP09683 121 aa15.68■□□□□ 0.1
SMPD1-201ENST00000342245 C12orf54Q6X4T0 127 aa15.68■□□□□ 0.1
SMPD1-201ENST00000342245 PATE1Q8WXA2 126 aa15.68■□□□□ 0.1
SMPD1-201ENST00000342245 RDH5Q92781 318 aa15.68■□□□□ 0.1
SMPD1-201ENST00000342245 BADQ92934 168 aa15.68■□□□□ 0.1
SMPD1-201ENST00000342245 SF3B5Q9BWJ5 86 aaKnown RBP15.68■□□□□ 0.1
SMPD1-201ENST00000342245 NAT8BQ9UHF3 227 aa15.68■□□□□ 0.1
SMPD1-201ENST00000342245 CRYAAP02489 173 aa15.68■□□□□ 0.1
SMPD1-201ENST00000342245 FBXW4P57775 412 aa15.68■□□□□ 0.1
SMPD1-201ENST00000342245 PMP22Q01453 160 aa15.68■□□□□ 0.1
SMPD1-201ENST00000342245 TRIP6Q15654 476 aaKnown RBP15.68■□□□□ 0.1
SMPD1-201ENST00000342245 FOXL2NBQ6ZUU3 175 aa15.68■□□□□ 0.1
SMPD1-201ENST00000342245 SCCPDHQ8NBX0 429 aa15.68■□□□□ 0.1
SMPD1-201ENST00000342245 NPCDR1Q9BY65 106 aa15.68■□□□□ 0.1
SMPD1-201ENST00000342245 ATP5G3P48201 142 aa15.67■□□□□ 0.1
SMPD1-201ENST00000342245 RSPO1Q2MKA7 263 aaPredicted RBP15.67■□□□□ 0.1
SMPD1-201ENST00000342245 SLC25A53Q5H9E4 307 aa15.67■□□□□ 0.1
SMPD1-201ENST00000342245 C10orf128Q5T292 105 aa15.67■□□□□ 0.1
SMPD1-201ENST00000342245 PRSS57Q6UWY2 283 aa15.67■□□□□ 0.1
SMPD1-201ENST00000342245 DTX1Q86Y01 620 aa15.67■□□□□ 0.1
SMPD1-201ENST00000342245 OCC1Q8TAD7 63 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms