RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 CD34P28906 385 aa11.3□□□□□ -0.6
PMS1-201ENST00000342075 EIF4EBP1Q13541 118 aaPredicted RBP11.3□□□□□ -0.6
PMS1-201ENST00000342075 IZUMO4Q1ZYL8 232 aa11.3□□□□□ -0.6
PMS1-201ENST00000342075 CD276Q5ZPR3 534 aa11.3□□□□□ -0.6
PMS1-201ENST00000342075 NCR3LG1Q68D85 454 aa11.3□□□□□ -0.6
PMS1-201ENST00000342075 LHFPL4Q7Z7J7 247 aa11.3□□□□□ -0.6
PMS1-201ENST00000342075 EDARADDQ8WWZ3 215 aa11.3□□□□□ -0.6
PMS1-201ENST00000342075 TNFRSF14Q92956 283 aa11.3□□□□□ -0.6
PMS1-201ENST00000342075 DMRTB1Q96MA1 342 aa11.3□□□□□ -0.6
PMS1-201ENST00000342075 SCGB3A2Q96PL1 93 aa11.3□□□□□ -0.6
PMS1-201ENST00000342075 ITGB1BP2Q9UKP3 347 aa11.3□□□□□ -0.6
PMS1-201ENST00000342075 RNASEK-C17orf49H0YIS7 233 aa11.3□□□□□ -0.6
PMS1-201ENST00000342075 PFDN1O60925 122 aa11.3□□□□□ -0.6
PMS1-201ENST00000342075 IFNA2P01563 188 aa11.3□□□□□ -0.6
PMS1-201ENST00000342075 ECI1P42126 302 aa11.3□□□□□ -0.6
PMS1-201ENST00000342075 H2BFSP57053 126 aa11.3□□□□□ -0.6
PMS1-201ENST00000342075 CMTM1Q8IZ96 169 aa11.3□□□□□ -0.6
PMS1-201ENST00000342075 C12orf45Q8N5I9 185 aaPredicted RBP11.3□□□□□ -0.6
PMS1-201ENST00000342075 OR52M1Q8NGK5 317 aa11.3□□□□□ -0.6
PMS1-201ENST00000342075 REG4Q9BYZ8 158 aa11.3□□□□□ -0.6
PMS1-201ENST00000342075 SIRPDQ9H106 197 aa11.3□□□□□ -0.6
PMS1-201ENST00000342075 MGAT4CQ9UBM8 478 aa11.3□□□□□ -0.6
PMS1-201ENST00000342075 HOXB5P09067 269 aa11.29□□□□□ -0.6
PMS1-201ENST00000342075 MMP9P14780 707 aa11.29□□□□□ -0.6
PMS1-201ENST00000342075 TAS2R31P59538 309 aa11.29□□□□□ -0.6
PMS1-201ENST00000342075 TMEM187Q14656 261 aa11.29□□□□□ -0.6
PMS1-201ENST00000342075 OR10X1Q8NGY0 326 aa11.29□□□□□ -0.6
PMS1-201ENST00000342075 MITD1Q8WV92 249 aa11.29□□□□□ -0.6
PMS1-201ENST00000342075 MBD6Q96DN6 1003 aa11.29□□□□□ -0.6
PMS1-201ENST00000342075 TBX15Q96SF7 602 aa11.29□□□□□ -0.6
PMS1-201ENST00000342075 GPN1Q9HCN4 374 aaPredicted RBP11.29□□□□□ -0.6
PMS1-201ENST00000342075 RGS11O94810 467 aa11.29□□□□□ -0.6
PMS1-201ENST00000342075 F2RP25116 425 aa11.29□□□□□ -0.6
PMS1-201ENST00000342075 ZNF816Q0VGE8 651 aaPredicted RBP11.29□□□□□ -0.6
PMS1-201ENST00000342075 LYZL2Q7Z4W2 148 aa11.29□□□□□ -0.6
PMS1-201ENST00000342075 TCTEX1D2Q8WW35 142 aa11.29□□□□□ -0.6
PMS1-201ENST00000342075 IGHV3-72A0A0B4J1Y9 119 aa11.28□□□□□ -0.6
PMS1-201ENST00000342075 FAM25EA8MYX2 175 aa11.28□□□□□ -0.6
PMS1-201ENST00000342075 SMAD7O15105 426 aaKnown RBP11.28□□□□□ -0.6
PMS1-201ENST00000342075 FOXH1O75593 365 aa11.28□□□□□ -0.6
PMS1-201ENST00000342075 DUS4LO95620 317 aaKnown RBP11.28□□□□□ -0.6
PMS1-201ENST00000342075 SLC25A16P16260 332 aa11.28□□□□□ -0.6
PMS1-201ENST00000342075 HOXB4P17483 251 aaPredicted RBP11.28□□□□□ -0.6
PMS1-201ENST00000342075 DVL1P1P54792 670 aaPredicted RBP11.28□□□□□ -0.6
PMS1-201ENST00000342075 DSCR9P59020 149 aa11.28□□□□□ -0.6
PMS1-201ENST00000342075 LY6G6FQ5SQ64 297 aa11.28□□□□□ -0.6
PMS1-201ENST00000342075 LPCAT3Q6P1A2 487 aa11.28□□□□□ -0.6
PMS1-201ENST00000342075 LRRC75A-AS1Q8N1F1 130 aa11.28□□□□□ -0.6
PMS1-201ENST00000342075 LHX4Q969G2 390 aa11.28□□□□□ -0.6
PMS1-201ENST00000342075 MSI2Q96DH6 328 aaKnown RBP11.28□□□□□ -0.6
PMS1-201ENST00000342075 SEC22AQ96IW7 307 aa11.28□□□□□ -0.6
PMS1-201ENST00000342075 SOX21Q9Y651 276 aaPredicted RBP11.28□□□□□ -0.6
PMS1-201ENST00000342075 PLXNB1O43157 2135 aa11.28□□□□□ -0.6
PMS1-201ENST00000342075 SNRPGP15A8MWD9 76 aa11.28□□□□□ -0.6
PMS1-201ENST00000342075 BOLA2-SMG1P6H3BVE0 249 aa11.28□□□□□ -0.6
PMS1-201ENST00000342075 TOX4O94842 621 aa11.28□□□□□ -0.6
PMS1-201ENST00000342075 AVPP01185 164 aa11.28□□□□□ -0.6
PMS1-201ENST00000342075 IGKV1-39P01597 117 aa11.28□□□□□ -0.6
PMS1-201ENST00000342075 IGKV1D-39P04432 117 aa11.28□□□□□ -0.6
PMS1-201ENST00000342075 DUTP33316 252 aaKnown RBP11.28□□□□□ -0.6
PMS1-201ENST00000342075 ZNF585BQ52M93 769 aa11.28□□□□□ -0.6
PMS1-201ENST00000342075 Q5BKY6 102 aa11.28□□□□□ -0.6
PMS1-201ENST00000342075 OR4P4Q8NGL7 312 aa11.28□□□□□ -0.6
PMS1-201ENST00000342075 ZNF486Q96H40 463 aaPredicted RBP11.28□□□□□ -0.6
PMS1-201ENST00000342075 ST6GAL2Q96JF0 529 aa11.28□□□□□ -0.6
PMS1-201ENST00000342075 MRPL20Q9BYC9 149 aaKnown RBP11.28□□□□□ -0.6
PMS1-201ENST00000342075 METTL8Q9H825 291 aaKnown RBP11.28□□□□□ -0.6
PMS1-201ENST00000342075 A0A087X0M5 115 aa11.27□□□□□ -0.6
PMS1-201ENST00000342075 A0A1B0GX30 115 aa11.27□□□□□ -0.6
PMS1-201ENST00000342075 SLC22A5O76082 557 aa11.27□□□□□ -0.6
PMS1-201ENST00000342075 IGLV1-47P01700 117 aa11.27□□□□□ -0.6
PMS1-201ENST00000342075 ARG1P05089 322 aa11.27□□□□□ -0.6
PMS1-201ENST00000342075 MSMBP08118 114 aa11.27□□□□□ -0.6
PMS1-201ENST00000342075 SULT1A3P0DMM9 295 aa11.27□□□□□ -0.6
PMS1-201ENST00000342075 SULT1A4P0DMN0 295 aa11.27□□□□□ -0.6
PMS1-201ENST00000342075 FAHD2BQ6P2I3 314 aaPredicted RBP11.27□□□□□ -0.6
PMS1-201ENST00000342075 CCDC71LQ8N9Z2 235 aa11.27□□□□□ -0.6
PMS1-201ENST00000342075 OR9G1Q8NH87 305 aa11.27□□□□□ -0.6
PMS1-201ENST00000342075 FAHD2AQ96GK7 314 aa11.27□□□□□ -0.6
PMS1-201ENST00000342075 CLEC7AQ9BXN2 247 aa11.27□□□□□ -0.6
PMS1-201ENST00000342075 HIF1ANQ9NWT6 349 aa11.27□□□□□ -0.6
PMS1-201ENST00000342075 A0A1W2PPH5 198 aa11.27□□□□□ -0.61
PMS1-201ENST00000342075 HMX3A6NHT5 357 aa11.27□□□□□ -0.61
PMS1-201ENST00000342075 RAB29O14966 203 aa11.27□□□□□ -0.61
PMS1-201ENST00000342075 CCNKO75909 580 aa11.27□□□□□ -0.61
PMS1-201ENST00000342075 FBLN7Q53RD9 439 aa11.27□□□□□ -0.61
PMS1-201ENST00000342075 TMEM268Q5VZI3 342 aa11.27□□□□□ -0.61
PMS1-201ENST00000342075 C11orf88Q6PI97 169 aa11.27□□□□□ -0.61
PMS1-201ENST00000342075 VKORC1L1Q8N0U8 176 aa11.27□□□□□ -0.61
PMS1-201ENST00000342075 SLC35G3Q8N808 338 aa11.27□□□□□ -0.61
PMS1-201ENST00000342075 ZNF383Q8NA42 475 aa11.27□□□□□ -0.61
PMS1-201ENST00000342075 OR10A7Q8NGE5 316 aa11.27□□□□□ -0.61
PMS1-201ENST00000342075 PHB2Q99623 299 aa11.27□□□□□ -0.61
PMS1-201ENST00000342075 TMEM222Q9H0R3 208 aa11.27□□□□□ -0.61
PMS1-201ENST00000342075 RAB9BQ9NP90 201 aa11.27□□□□□ -0.61
PMS1-201ENST00000342075 INSIG2Q9Y5U4 225 aa11.27□□□□□ -0.61
PMS1-201ENST00000342075 TNCP24821 2201 aa11.27□□□□□ -0.61
PMS1-201ENST00000342075 A0A0G2JRQ6 117 aa11.27□□□□□ -0.61
PMS1-201ENST00000342075 NXPH3O95157 252 aa11.27□□□□□ -0.61
PMS1-201ENST00000342075 RND3P61587 244 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms