RNA–Protein interactions for RNA: ENST00000341594.9

SYNE1-201, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNE1, Length 26,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-201ENST00000341594 MMDQ15546 238 aa3.09□□□□□ -1.92
SYNE1-201ENST00000341594 OR1Q1Q15612 314 aa3.09□□□□□ -1.92
SYNE1-201ENST00000341594 DCAF4L2Q8NA75 395 aa3.09□□□□□ -1.92
SYNE1-201ENST00000341594 HOXB13Q92826 284 aaPredicted RBP3.09□□□□□ -1.92
SYNE1-201ENST00000341594 A4GNTQ9UNA3 340 aa3.09□□□□□ -1.92
SYNE1-201ENST00000341594 A0A0U1RRA0 63 aa3.09□□□□□ -1.92
SYNE1-201ENST00000341594 LINC01545Q5VT33 79 aa3.09□□□□□ -1.92
SYNE1-201ENST00000341594 SLC22A24Q8N4F4 322 aa3.09□□□□□ -1.92
SYNE1-201ENST00000341594 LGALS14Q8TCE9 139 aa3.09□□□□□ -1.92
SYNE1-201ENST00000341594 HRKO00198 91 aa3.09□□□□□ -1.92
SYNE1-201ENST00000341594 PWWP2BQ6NUJ5 590 aa3.09□□□□□ -1.92
SYNE1-201ENST00000341594 ZNF714Q96N38 554 aa3.09□□□□□ -1.92
SYNE1-201ENST00000341594 TXNIPQ9H3M7 391 aa3.09□□□□□ -1.92
SYNE1-201ENST00000341594 RPL36A-HNRNPH2H7BZ11 118 aa3.09□□□□□ -1.92
SYNE1-201ENST00000341594 CLEC20AQ6ZU45 233 aa3.09□□□□□ -1.92
SYNE1-201ENST00000341594 SLC35E1Q96K37 410 aa3.09□□□□□ -1.92
SYNE1-201ENST00000341594 DEFB118Q96PH6 123 aa3.09□□□□□ -1.92
SYNE1-201ENST00000341594 ZNF385AQ96PM9 386 aaKnown RBP3.09□□□□□ -1.92
SYNE1-201ENST00000341594 ICAM5Q9UMF0 924 aa3.09□□□□□ -1.92
SYNE1-201ENST00000341594 HLA-DRB1P01911 266 aa3.09□□□□□ -1.92
SYNE1-201ENST00000341594 PRNPP04156 253 aa3.09□□□□□ -1.92
SYNE1-201ENST00000341594 H2BFWTQ7Z2G1 175 aa3.09□□□□□ -1.92
SYNE1-201ENST00000341594 HS3ST2Q9Y278 367 aa3.09□□□□□ -1.92
SYNE1-201ENST00000341594 IGHV1-69-2A0A0G2JMI3 117 aa3.09□□□□□ -1.92
SYNE1-201ENST00000341594 RPL11P62913 178 aaKnown RBP3.09□□□□□ -1.92
SYNE1-201ENST00000341594 MSI2Q96DH6 328 aaKnown RBP3.09□□□□□ -1.92
SYNE1-201ENST00000341594 MS4A6AQ9H2W1 248 aa3.09□□□□□ -1.92
SYNE1-201ENST00000341594 PRLHRP49683 370 aa3.09□□□□□ -1.92
SYNE1-201ENST00000341594 KLRB1Q12918 225 aa3.09□□□□□ -1.92
SYNE1-201ENST00000341594 TBX15Q96SF7 602 aa3.09□□□□□ -1.92
SYNE1-201ENST00000341594 SOX7Q9BT81 388 aa3.09□□□□□ -1.92
SYNE1-201ENST00000341594 MAP1LC3AQ9H492 121 aa3.09□□□□□ -1.92
SYNE1-201ENST00000341594 SLC25A37Q9NYZ2 338 aa3.09□□□□□ -1.92
SYNE1-201ENST00000341594 B3GALT5Q9Y2C3 310 aa3.09□□□□□ -1.92
SYNE1-201ENST00000341594 CENPEQ02224 2701 aa3.09□□□□□ -1.92
SYNE1-201ENST00000341594 FAM231BA6NCW3 169 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 PTOV1Q86YD1 416 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 PLAUP00749 431 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 CT83Q5H943 113 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 TNFSF13O75888 250 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 TRGC2P03986 189 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 LY6G5CQ5SRR4 150 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 IL22RA1Q8N6P7 574 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 SRD5A3Q9H8P0 318 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 SPTBN4Q9H254 2564 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 M0QZ24 198 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 HCRTR1O43613 425 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 PPBPP02775 128 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 SRD5A1P18405 259 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 DRD1P21728 446 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 FZD2Q14332 565 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 OR2T10Q8NGZ9 312 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 FAM3DQ96BQ1 224 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 FAM181BA6NEQ2 426 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 OR10G7Q8NGN6 311 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.08□□□□□ -1.92
SYNE1-201ENST00000341594 NECAP2Q9NVZ3 263 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 CA7P43166 264 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 NUTF2P61970 127 aaKnown RBP3.08□□□□□ -1.92
SYNE1-201ENST00000341594 C9J4A7 227 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 ADGRE4PQ86SQ3 457 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 WFDC5Q8TCV5 224 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 PRSS16Q9NQE7 514 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 C9JQL5 133 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 EML2O95834 649 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 FRMD6-AS1P0C7T7 363 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 SMRP1Q8NCR6 262 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 MARCH1Q8TCQ1 289 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 PTPMT1Q8WUK0 201 aaPredicted RBP3.08□□□□□ -1.92
SYNE1-201ENST00000341594 MRGPRFQ96AM1 343 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 C16orf70Q9BSU1 422 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 AP5S1Q9NUS5 200 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 TMEM136Q6ZRR5 245 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 LINC01551Q86U37 167 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 APOBEC4Q8WW27 367 aaKnown RBP3.08□□□□□ -1.92
SYNE1-201ENST00000341594 RBKSQ9H477 322 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 SPINT3P49223 89 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 SHBQ15464 509 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 TIMD4Q96H15 378 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 UMODP07911 640 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 FAM87AP0C7U9 286 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 HTR1DP28221 377 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 ZNF766Q5HY98 468 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 C17orf105B2RV13 164 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 MAGEA5P43359 124 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 SPATA45Q537H7 98 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 MUC20Q8N307 709 aaPredicted RBP3.08□□□□□ -1.92
SYNE1-201ENST00000341594 LINC00477Q96M19 166 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 B4GALT6Q9UBX8 382 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 C7orf77A4D0Y5 90 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 ASPDHA6ND91 283 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 MOSPD3O75425 235 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 AMTP48728 403 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 SLC35E4Q6ICL7 350 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 ERGP11308 486 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 PNLIPRP2P54317 469 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 HERPUD1Q15011 391 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 LGI3Q8N145 548 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 ZNF355PQ9NSJ1 428 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 ACRV1P26436 265 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms