RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 RPL30P62888 115 aaKnown RBP12.53□□□□□ -0.4
TPM3-208ENST00000341485 VHLLQ6RSH7 139 aa12.53□□□□□ -0.4
TPM3-208ENST00000341485 C22orf34Q6ZV56 151 aa12.53□□□□□ -0.4
TPM3-208ENST00000341485 ZNF525Q8N782 197 aa12.53□□□□□ -0.4
TPM3-208ENST00000341485 CD300LFQ8TDQ1 290 aa12.53□□□□□ -0.4
TPM3-208ENST00000341485 MRGPRDQ8TDS7 321 aa12.53□□□□□ -0.4
TPM3-208ENST00000341485 HIST1H2BAQ96A08 127 aa12.53□□□□□ -0.4
TPM3-208ENST00000341485 EGLN1Q9GZT9 426 aa12.53□□□□□ -0.4
TPM3-208ENST00000341485 SMDT1Q9H4I9 107 aa12.53□□□□□ -0.4
TPM3-208ENST00000341485 KLF2Q9Y5W3 355 aaPredicted RBP12.53□□□□□ -0.4
TPM3-208ENST00000341485 CHD3Q12873 2000 aaKnown RBP12.53□□□□□ -0.4
TPM3-208ENST00000341485 RAMP3O60896 148 aa12.53□□□□□ -0.4
TPM3-208ENST00000341485 FOLR2P14207 255 aa12.53□□□□□ -0.4
TPM3-208ENST00000341485 DAOP14920 347 aa12.53□□□□□ -0.4
TPM3-208ENST00000341485 CD40P25942 277 aa12.53□□□□□ -0.4
TPM3-208ENST00000341485 GABRA2P47869 451 aa12.53□□□□□ -0.4
TPM3-208ENST00000341485 COL10A1Q03692 680 aa12.53□□□□□ -0.4
TPM3-208ENST00000341485 TMEM108Q6UXF1 575 aa12.53□□□□□ -0.4
TPM3-208ENST00000341485 DPPA3Q6W0C5 159 aa12.53□□□□□ -0.4
TPM3-208ENST00000341485 SSX8Q7RTT4 187 aa12.53□□□□□ -0.4
TPM3-208ENST00000341485 ZNF808Q8N4W9 903 aaPredicted RBP12.53□□□□□ -0.4
TPM3-208ENST00000341485 ZBTB34Q8NCN2 500 aa12.53□□□□□ -0.4
TPM3-208ENST00000341485 RSG1Q9BU20 258 aa12.53□□□□□ -0.4
TPM3-208ENST00000341485 TOLLIPQ9H0E2 274 aa12.53□□□□□ -0.4
TPM3-208ENST00000341485 DUSP13Q9UII6 198 aa12.53□□□□□ -0.4
TPM3-208ENST00000341485 GLIPR1P48060 266 aa12.52□□□□□ -0.4
TPM3-208ENST00000341485 RPS23P62266 143 aaKnown RBP12.52□□□□□ -0.4
TPM3-208ENST00000341485 HAGHQ16775 308 aa12.52□□□□□ -0.4
TPM3-208ENST00000341485 OR2B11Q5JQS5 317 aa12.52□□□□□ -0.4
TPM3-208ENST00000341485 SLC25A24Q6NUK1 477 aa12.52□□□□□ -0.4
TPM3-208ENST00000341485 ZFP82Q8N141 532 aa12.52□□□□□ -0.4
TPM3-208ENST00000341485 TPRX1Q8N7U7 411 aa12.52□□□□□ -0.4
TPM3-208ENST00000341485 SFT2D1Q8WV19 159 aa12.52□□□□□ -0.4
TPM3-208ENST00000341485 HIPK2Q9H2X6 1198 aa12.52□□□□□ -0.4
TPM3-208ENST00000341485 MMP24Q9Y5R2 645 aa12.52□□□□□ -0.4
TPM3-208ENST00000341485 A0A1B0GWJ7 208 aa12.52□□□□□ -0.41
TPM3-208ENST00000341485 FAM90A27PA6NNH2 459 aa12.52□□□□□ -0.41
TPM3-208ENST00000341485 CHRNB4P30926 498 aa12.52□□□□□ -0.41
TPM3-208ENST00000341485 GLRXP35754 106 aa12.52□□□□□ -0.41
TPM3-208ENST00000341485 MSMPQ1L6U9 139 aa12.52□□□□□ -0.41
TPM3-208ENST00000341485 SMIM21Q3B7S5 101 aa12.52□□□□□ -0.41
TPM3-208ENST00000341485 SOHLH1Q5JUK2 328 aa12.52□□□□□ -0.41
TPM3-208ENST00000341485 KRBOX4Q5JUW0 171 aa12.52□□□□□ -0.41
TPM3-208ENST00000341485 OR13A1Q8NGR1 328 aa12.52□□□□□ -0.41
TPM3-208ENST00000341485 HEATR1Q9H583 2144 aaKnown RBP12.52□□□□□ -0.41
TPM3-208ENST00000341485 IFNL4K9M1U5 179 aa12.51□□□□□ -0.41
TPM3-208ENST00000341485 SRP19P09132 144 aaKnown RBP12.51□□□□□ -0.41
TPM3-208ENST00000341485 P0C879 139 aa12.51□□□□□ -0.41
TPM3-208ENST00000341485 SSTR5P35346 364 aa12.51□□□□□ -0.41
TPM3-208ENST00000341485 BRWD1-AS2P59051 145 aa12.51□□□□□ -0.41
TPM3-208ENST00000341485 TLE4Q04727 773 aa12.51□□□□□ -0.41
TPM3-208ENST00000341485 ZNF816Q0VGE8 651 aaPredicted RBP12.51□□□□□ -0.41
TPM3-208ENST00000341485 ICAM4Q14773 271 aa12.51□□□□□ -0.41
TPM3-208ENST00000341485 RHEBQ15382 184 aa12.51□□□□□ -0.41
TPM3-208ENST00000341485 ZNF506Q5JVG8 444 aa12.51□□□□□ -0.41
TPM3-208ENST00000341485 CD177Q8N6Q3 437 aa12.51□□□□□ -0.41
TPM3-208ENST00000341485 C2CD4CQ8TF44 421 aa12.51□□□□□ -0.41
TPM3-208ENST00000341485 LRRC29Q8WV35 223 aa12.51□□□□□ -0.41
TPM3-208ENST00000341485 ISOC2Q96AB3 205 aa12.51□□□□□ -0.41
TPM3-208ENST00000341485 TUBA4BQ9H853 241 aa12.51□□□□□ -0.41
TPM3-208ENST00000341485 COA4Q9NYJ1 87 aa12.51□□□□□ -0.41
TPM3-208ENST00000341485 A0A1W2PPH5 198 aa12.5□□□□□ -0.41
TPM3-208ENST00000341485 FAM90A26D6RGX4 464 aa12.5□□□□□ -0.41
TPM3-208ENST00000341485 SCAF4O95104 1147 aaKnown RBP12.5□□□□□ -0.41
TPM3-208ENST00000341485 PTAFRP25105 342 aa12.5□□□□□ -0.41
TPM3-208ENST00000341485 G6PCP35575 357 aa12.5□□□□□ -0.41
TPM3-208ENST00000341485 KLF3P57682 345 aaPredicted RBP12.5□□□□□ -0.41
TPM3-208ENST00000341485 UBE2KP61086 200 aa12.5□□□□□ -0.41
TPM3-208ENST00000341485 NKX6-1P78426 367 aaPredicted RBP12.5□□□□□ -0.41
TPM3-208ENST00000341485 HABP2Q14520 560 aaPredicted RBP12.5□□□□□ -0.41
TPM3-208ENST00000341485 SPANXN5Q5MJ07 72 aa12.5□□□□□ -0.41
TPM3-208ENST00000341485 LINC00518Q8N0U6 118 aa12.5□□□□□ -0.41
TPM3-208ENST00000341485 CLDND2Q8NHS1 167 aa12.5□□□□□ -0.41
TPM3-208ENST00000341485 SCGB1C1Q8TD33 95 aa12.5□□□□□ -0.41
TPM3-208ENST00000341485 RBKSQ9H477 322 aa12.5□□□□□ -0.41
TPM3-208ENST00000341485 BIN3Q9NQY0 253 aa12.5□□□□□ -0.41
TPM3-208ENST00000341485 PUS1Q9Y606 427 aaKnown RBP eCLIP12.5□□□□□ -0.41
TPM3-208ENST00000341485 DIDO1Q9BTC0 2240 aaKnown RBP12.5□□□□□ -0.41
TPM3-208ENST00000341485 MAP1BP46821 2468 aaKnown RBP12.5□□□□□ -0.41
TPM3-208ENST00000341485 IGHV3-43A0A0B4J1X8 118 aa12.5□□□□□ -0.41
TPM3-208ENST00000341485 C17orf98A8MV24 154 aa12.5□□□□□ -0.41
TPM3-208ENST00000341485 PPIHO43447 177 aaKnown RBP12.5□□□□□ -0.41
TPM3-208ENST00000341485 S1PR2O95136 353 aa12.5□□□□□ -0.41
TPM3-208ENST00000341485 HBE1P02100 147 aa12.5□□□□□ -0.41
TPM3-208ENST00000341485 THBDP07204 575 aa12.5□□□□□ -0.41
TPM3-208ENST00000341485 IGHV3-43DP0DP04 118 aa12.5□□□□□ -0.41
TPM3-208ENST00000341485 EGR1P18146 543 aa12.5□□□□□ -0.41
TPM3-208ENST00000341485 TNFRSF9Q07011 255 aa12.5□□□□□ -0.41
TPM3-208ENST00000341485 LRRC75BQ2VPJ9 315 aa12.5□□□□□ -0.41
TPM3-208ENST00000341485 BTNL3Q6UXE8 466 aa12.5□□□□□ -0.41
TPM3-208ENST00000341485 LRP11Q86VZ4 500 aa12.5□□□□□ -0.41
TPM3-208ENST00000341485 NINJ1Q92982 152 aa12.5□□□□□ -0.41
TPM3-208ENST00000341485 LURAP1Q96LR2 239 aa12.5□□□□□ -0.41
TPM3-208ENST00000341485 DCTN5Q9BTE1 182 aa12.5□□□□□ -0.41
TPM3-208ENST00000341485 VSIRQ9H7M9 311 aa12.5□□□□□ -0.41
TPM3-208ENST00000341485 NGBQ9NPG2 151 aa12.5□□□□□ -0.41
TPM3-208ENST00000341485 TRAV1-1A0A0B4J248 108 aa12.49□□□□□ -0.41
TPM3-208ENST00000341485 A0A1W2PPE2 198 aa12.49□□□□□ -0.41
TPM3-208ENST00000341485 KRASP01116 189 aa12.49□□□□□ -0.41
TPM3-208ENST00000341485 FBP1P09467 338 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms