RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 RAB29O14966 203 aa12.22□□□□□ -0.45
NECTIN1-202ENST00000340882 CA11O75493 328 aa12.22□□□□□ -0.45
NECTIN1-202ENST00000340882 AADACP22760 399 aa12.22□□□□□ -0.45
NECTIN1-202ENST00000340882 HMGN3Q15651 99 aa12.22□□□□□ -0.45
NECTIN1-202ENST00000340882 SLC25A30Q5SVS4 291 aa12.22□□□□□ -0.45
NECTIN1-202ENST00000340882 C6orf141Q5SZD1 244 aa12.22□□□□□ -0.45
NECTIN1-202ENST00000340882 GLIPR1L1Q6UWM5 242 aa12.22□□□□□ -0.45
NECTIN1-202ENST00000340882 ZNF554Q86TJ5 538 aa12.22□□□□□ -0.45
NECTIN1-202ENST00000340882 OR13C5Q8NGS8 318 aa12.22□□□□□ -0.45
NECTIN1-202ENST00000340882 GPR148Q8TDV2 347 aa12.22□□□□□ -0.45
NECTIN1-202ENST00000340882 MUL1Q969V5 352 aa12.22□□□□□ -0.45
NECTIN1-202ENST00000340882 GALMQ96C23 342 aa12.22□□□□□ -0.45
NECTIN1-202ENST00000340882 OR14A2Q96R54 314 aa12.22□□□□□ -0.45
NECTIN1-202ENST00000340882 RNF5Q99942 180 aa12.22□□□□□ -0.45
NECTIN1-202ENST00000340882 AGMATQ9BSE5 352 aa12.22□□□□□ -0.45
NECTIN1-202ENST00000340882 KRTAP4-5Q9BYR2 181 aa12.22□□□□□ -0.45
NECTIN1-202ENST00000340882 ERVK13-1Q9NX77 482 aa12.22□□□□□ -0.45
NECTIN1-202ENST00000340882 MSGN1A6NI15 193 aa12.21□□□□□ -0.45
NECTIN1-202ENST00000340882 FAM90A23PA8MXZ1 464 aa12.21□□□□□ -0.45
NECTIN1-202ENST00000340882 AIREO43918 545 aa12.21□□□□□ -0.45
NECTIN1-202ENST00000340882 IGFBP3P17936 291 aaPredicted RBP12.21□□□□□ -0.45
NECTIN1-202ENST00000340882 FUT3P21217 361 aa12.21□□□□□ -0.45
NECTIN1-202ENST00000340882 KIR2DS2P43631 304 aa12.21□□□□□ -0.45
NECTIN1-202ENST00000340882 RPS16P62249 146 aaKnown RBP12.21□□□□□ -0.45
NECTIN1-202ENST00000340882 PPP3R1P63098 170 aa12.21□□□□□ -0.45
NECTIN1-202ENST00000340882 GNGT1P63211 74 aa12.21□□□□□ -0.45
NECTIN1-202ENST00000340882 WFDC3Q8IUB2 231 aa12.21□□□□□ -0.45
NECTIN1-202ENST00000340882 DYNLRB2Q8TF09 96 aa12.21□□□□□ -0.45
NECTIN1-202ENST00000340882 TRUB1Q8WWH5 349 aaKnown RBP12.21□□□□□ -0.45
NECTIN1-202ENST00000340882 IL1F10Q8WWZ1 152 aa12.21□□□□□ -0.45
NECTIN1-202ENST00000340882 SNAPC3Q92966 411 aa12.21□□□□□ -0.45
NECTIN1-202ENST00000340882 SELENOIQ9C0D9 397 aa12.21□□□□□ -0.45
NECTIN1-202ENST00000340882 IMPAD1Q9NX62 359 aa12.21□□□□□ -0.45
NECTIN1-202ENST00000340882 COA4Q9NYJ1 87 aa12.21□□□□□ -0.45
NECTIN1-202ENST00000340882 DNAH11Q96DT5 4516 aa12.21□□□□□ -0.45
NECTIN1-202ENST00000340882 TRAV8-7A0A075B6U6 113 aa12.2□□□□□ -0.46
NECTIN1-202ENST00000340882 LOC102724200A0A096LPH7 203 aaPredicted RBP12.2□□□□□ -0.46
NECTIN1-202ENST00000340882 C2orf70A6NJV1 201 aa12.2□□□□□ -0.46
NECTIN1-202ENST00000340882 IGLV2-23P01705 113 aa12.2□□□□□ -0.46
NECTIN1-202ENST00000340882 CD2P06729 351 aa12.2□□□□□ -0.46
NECTIN1-202ENST00000340882 FOLR2P14207 255 aa12.2□□□□□ -0.46
NECTIN1-202ENST00000340882 GBX2P52951 348 aaPredicted RBP12.2□□□□□ -0.46
NECTIN1-202ENST00000340882 SNRPGP62308 76 aaKnown RBP12.2□□□□□ -0.46
NECTIN1-202ENST00000340882 GPR176Q14439 515 aa12.2□□□□□ -0.46
NECTIN1-202ENST00000340882 ZNF383Q8NA42 475 aa12.2□□□□□ -0.46
NECTIN1-202ENST00000340882 PHLDA1Q8WV24 401 aaPredicted RBP12.2□□□□□ -0.46
NECTIN1-202ENST00000340882 CACNG8Q8WXS5 425 aa12.2□□□□□ -0.46
NECTIN1-202ENST00000340882 KCTD12Q96CX2 325 aaKnown RBP12.2□□□□□ -0.46
NECTIN1-202ENST00000340882 USMG5Q96IX5 58 aa12.2□□□□□ -0.46
NECTIN1-202ENST00000340882 Q96M66 194 aa12.2□□□□□ -0.46
NECTIN1-202ENST00000340882 TSNAXQ99598 290 aaKnown RBP12.2□□□□□ -0.46
NECTIN1-202ENST00000340882 GPX5O75715 221 aa12.19□□□□□ -0.46
NECTIN1-202ENST00000340882 SPDEFO95238 335 aa12.19□□□□□ -0.46
NECTIN1-202ENST00000340882 PRH1P02810 166 aa12.19□□□□□ -0.46
NECTIN1-202ENST00000340882 CRYGBP07316 175 aa12.19□□□□□ -0.46
NECTIN1-202ENST00000340882 MGMTP16455 207 aa12.19□□□□□ -0.46
NECTIN1-202ENST00000340882 CPEP16870 476 aa12.19□□□□□ -0.46
NECTIN1-202ENST00000340882 MRGPRG-AS1Q2M3A8 158 aa12.19□□□□□ -0.46
NECTIN1-202ENST00000340882 MRPL48Q96GC5 212 aaKnown RBP12.19□□□□□ -0.46
NECTIN1-202ENST00000340882 SULT4A1Q9BR01 284 aa12.19□□□□□ -0.46
NECTIN1-202ENST00000340882 AMBNQ9NP70 447 aa12.19□□□□□ -0.46
NECTIN1-202ENST00000340882 STEAP1Q9UHE8 339 aa12.19□□□□□ -0.46
NECTIN1-202ENST00000340882 ZNF230Q9UIE0 474 aaPredicted RBP12.19□□□□□ -0.46
NECTIN1-202ENST00000340882 DMRT1Q9Y5R6 373 aa12.19□□□□□ -0.46
NECTIN1-202ENST00000340882 PKD1P98161 4303 aa12.18□□□□□ -0.46
NECTIN1-202ENST00000340882 A0A0B4J203 849 aa12.18□□□□□ -0.46
NECTIN1-202ENST00000340882 HLA-AP01891 365 aaKnown RBP12.18□□□□□ -0.46
NECTIN1-202ENST00000340882 GLAP06280 429 aa12.18□□□□□ -0.46
NECTIN1-202ENST00000340882 MRPL28Q13084 256 aaKnown RBP12.18□□□□□ -0.46
NECTIN1-202ENST00000340882 DEFB135Q30KP9 77 aa12.18□□□□□ -0.46
NECTIN1-202ENST00000340882 MEDAGQ5VYS4 303 aa12.18□□□□□ -0.46
NECTIN1-202ENST00000340882 TMEM61Q8N0U2 210 aa12.18□□□□□ -0.46
NECTIN1-202ENST00000340882 ADAD2Q8NCV1 583 aaKnown RBP12.18□□□□□ -0.46
NECTIN1-202ENST00000340882 KCNG3Q8TAE7 436 aa12.18□□□□□ -0.46
NECTIN1-202ENST00000340882 AKIP1Q9NQ31 210 aa12.18□□□□□ -0.46
NECTIN1-202ENST00000340882 OAZ3Q9UMX2 235 aa12.18□□□□□ -0.46
NECTIN1-202ENST00000340882 A0A1B0GVY2 172 aa12.17□□□□□ -0.46
NECTIN1-202ENST00000340882 FAM90A7PA6NKC0 464 aa12.17□□□□□ -0.46
NECTIN1-202ENST00000340882 PPP5D1E7EU14 171 aa12.17□□□□□ -0.46
NECTIN1-202ENST00000340882 SPRY2O43597 315 aa12.17□□□□□ -0.46
NECTIN1-202ENST00000340882 PDCD6O75340 191 aa12.17□□□□□ -0.46
NECTIN1-202ENST00000340882 CRTAPO75718 401 aaPredicted RBP12.17□□□□□ -0.46
NECTIN1-202ENST00000340882 NDUFB8O95169 186 aa12.17□□□□□ -0.46
NECTIN1-202ENST00000340882 GABRB1P18505 474 aa12.17□□□□□ -0.46
NECTIN1-202ENST00000340882 FASP25445 335 aa12.17□□□□□ -0.46
NECTIN1-202ENST00000340882 LGALS7P47929 136 aa12.17□□□□□ -0.46
NECTIN1-202ENST00000340882 ZNF45Q02386 682 aa12.17□□□□□ -0.46
NECTIN1-202ENST00000340882 EXOSC2Q13868 293 aaKnown RBP12.17□□□□□ -0.46
NECTIN1-202ENST00000340882 SLC16A13Q7RTY0 426 aa12.17□□□□□ -0.46
NECTIN1-202ENST00000340882 JAGN1Q8N5M9 183 aa12.17□□□□□ -0.46
NECTIN1-202ENST00000340882 C11orf54Q9H0W9 315 aaPredicted RBP12.17□□□□□ -0.46
NECTIN1-202ENST00000340882 OR1A1Q9P1Q5 309 aa12.17□□□□□ -0.46
NECTIN1-202ENST00000340882 SAC3D1A6NKF1 404 aa12.16□□□□□ -0.46
NECTIN1-202ENST00000340882 LIMS3P0CW19 117 aa12.16□□□□□ -0.46
NECTIN1-202ENST00000340882 LIMS4P0CW20 117 aa12.16□□□□□ -0.46
NECTIN1-202ENST00000340882 BMI1P35226 326 aa12.16□□□□□ -0.46
NECTIN1-202ENST00000340882 RHOGP84095 191 aa12.16□□□□□ -0.46
NECTIN1-202ENST00000340882 AWAT2Q6E213 333 aa12.16□□□□□ -0.46
NECTIN1-202ENST00000340882 SVOPQ8N4V2 548 aa12.16□□□□□ -0.46
NECTIN1-202ENST00000340882 OR52B4Q8NGK2 314 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms