RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 C1orf162Q8NEQ5 155 aaPredicted RBP5.35□□□□□ -1.55
PRKDC-202ENST00000338368 RPEQ96AT9 228 aa5.35□□□□□ -1.55
PRKDC-202ENST00000338368 CLN8Q9UBY8 286 aa5.35□□□□□ -1.55
PRKDC-202ENST00000338368 COL4A4P53420 1690 aaPredicted RBP5.35□□□□□ -1.55
PRKDC-202ENST00000338368 IGHV2OR16-5A0A0B4J2B6 119 aa5.35□□□□□ -1.55
PRKDC-202ENST00000338368 C12orf77C9JDV5 145 aa5.35□□□□□ -1.55
PRKDC-202ENST00000338368 YIF1AO95070 293 aa5.35□□□□□ -1.55
PRKDC-202ENST00000338368 UCP1P25874 307 aa5.35□□□□□ -1.55
PRKDC-202ENST00000338368 ISOC2Q96AB3 205 aa5.35□□□□□ -1.55
PRKDC-202ENST00000338368 PATZ1Q9HBE1 687 aaKnown RBP5.35□□□□□ -1.55
PRKDC-202ENST00000338368 MUC1P15941 1255 aaPredicted RBP5.35□□□□□ -1.55
PRKDC-202ENST00000338368 CABLES2Q9BTV7 478 aa5.35□□□□□ -1.55
PRKDC-202ENST00000338368 FKBP11Q9NYL4 201 aa5.35□□□□□ -1.55
PRKDC-202ENST00000338368 KCNMB2Q9Y691 235 aa5.35□□□□□ -1.55
PRKDC-202ENST00000338368 TNRC6AQ8NDV7 1962 aaKnown RBP5.35□□□□□ -1.55
PRKDC-202ENST00000338368 IGKV1-27A0A075B6S5 117 aa5.35□□□□□ -1.55
PRKDC-202ENST00000338368 PPIHO43447 177 aaKnown RBP5.35□□□□□ -1.55
PRKDC-202ENST00000338368 ARG1P05089 322 aa5.35□□□□□ -1.55
PRKDC-202ENST00000338368 CEACAM3P40198 252 aa5.35□□□□□ -1.55
PRKDC-202ENST00000338368 OPRK1P41145 380 aa5.35□□□□□ -1.55
PRKDC-202ENST00000338368 HGFACQ04756 655 aa5.35□□□□□ -1.55
PRKDC-202ENST00000338368 GUCA2BQ16661 112 aa5.35□□□□□ -1.55
PRKDC-202ENST00000338368 TMEM41BQ5BJD5 291 aa5.35□□□□□ -1.55
PRKDC-202ENST00000338368 NSUN5P2Q63ZY6 315 aa5.35□□□□□ -1.55
PRKDC-202ENST00000338368 VSTM2AQ8TAG5 236 aa5.35□□□□□ -1.55
PRKDC-202ENST00000338368 SPRR3Q9UBC9 169 aa5.35□□□□□ -1.55
PRKDC-202ENST00000338368 ODAMA1E959 279 aa5.35□□□□□ -1.55
PRKDC-202ENST00000338368 SSTR5P35346 364 aa5.35□□□□□ -1.55
PRKDC-202ENST00000338368 TMEM241Q24JQ0 296 aa5.35□□□□□ -1.55
PRKDC-202ENST00000338368 TIGITQ495A1 244 aa5.35□□□□□ -1.55
PRKDC-202ENST00000338368 FLYWCH2Q96CP2 140 aaKnown RBP5.35□□□□□ -1.55
PRKDC-202ENST00000338368 SCNM1Q9BWG6 230 aa5.35□□□□□ -1.55
PRKDC-202ENST00000338368 TIMM8BQ9Y5J9 83 aaPredicted RBP5.35□□□□□ -1.55
PRKDC-202ENST00000338368 MED12Q93074 2177 aa5.35□□□□□ -1.55
PRKDC-202ENST00000338368 GYPAP02724 150 aa5.35□□□□□ -1.55
PRKDC-202ENST00000338368 CELA3BP08861 270 aa5.35□□□□□ -1.55
PRKDC-202ENST00000338368 C9orf152Q5JTZ5 239 aa5.35□□□□□ -1.55
PRKDC-202ENST00000338368 PUSL1Q8N0Z8 303 aaKnown RBP5.35□□□□□ -1.55
PRKDC-202ENST00000338368 RSG1Q9BU20 258 aa5.35□□□□□ -1.55
PRKDC-202ENST00000338368 OR51I2Q9H344 312 aa5.35□□□□□ -1.55
PRKDC-202ENST00000338368 IGKV1D-8A0A087WSZ0 117 aa5.35□□□□□ -1.55
PRKDC-202ENST00000338368 SOX15O60248 233 aa5.35□□□□□ -1.55
PRKDC-202ENST00000338368 KIR2DS2P43631 304 aa5.35□□□□□ -1.55
PRKDC-202ENST00000338368 BSXQ3C1V8 233 aa5.35□□□□□ -1.55
PRKDC-202ENST00000338368 LYRM2Q9NU23 88 aaPredicted RBP5.35□□□□□ -1.55
PRKDC-202ENST00000338368 H0YIZ8 118 aa5.35□□□□□ -1.55
PRKDC-202ENST00000338368 OR4A8P0C604 315 aa5.35□□□□□ -1.55
PRKDC-202ENST00000338368 DAOP14920 347 aa5.35□□□□□ -1.55
PRKDC-202ENST00000338368 IL22RA2Q969J5 263 aa5.35□□□□□ -1.55
PRKDC-202ENST00000338368 MFSD2BA6NFX1 497 aa5.34□□□□□ -1.55
PRKDC-202ENST00000338368 J3QR06 171 aa5.34□□□□□ -1.55
PRKDC-202ENST00000338368 WNT5AP41221 380 aa5.34□□□□□ -1.55
PRKDC-202ENST00000338368 PRRX1P54821 245 aa5.34□□□□□ -1.55
PRKDC-202ENST00000338368 SSX2Q16385 188 aa5.34□□□□□ -1.55
PRKDC-202ENST00000338368 FAM209BQ5JX69 171 aa5.34□□□□□ -1.55
PRKDC-202ENST00000338368 TEPPQ6URK8 271 aa5.34□□□□□ -1.55
PRKDC-202ENST00000338368 NECAP1Q8NC96 275 aa5.34□□□□□ -1.55
PRKDC-202ENST00000338368 MDS2Q8NDY4 140 aa5.34□□□□□ -1.55
PRKDC-202ENST00000338368 HEXA-AS1Q9H8Q6 139 aa5.34□□□□□ -1.55
PRKDC-202ENST00000338368 NPVFQ9HCQ7 196 aa5.34□□□□□ -1.55
PRKDC-202ENST00000338368 CYB5R3P00387 301 aaPredicted RBP5.34□□□□□ -1.55
PRKDC-202ENST00000338368 CD1BP29016 333 aa5.34□□□□□ -1.55
PRKDC-202ENST00000338368 UBE2G1P62253 170 aa5.34□□□□□ -1.55
PRKDC-202ENST00000338368 PLPPR1Q8TBJ4 325 aa5.34□□□□□ -1.55
PRKDC-202ENST00000338368 MED12LQ86YW9 2145 aa5.34□□□□□ -1.55
PRKDC-202ENST00000338368 TRBV6-7A0A0A0MS04 114 aa5.34□□□□□ -1.55
PRKDC-202ENST00000338368 MGST1P10620 155 aaKnown RBP5.34□□□□□ -1.55
PRKDC-202ENST00000338368 TGIF2LYQ8IUE0 185 aa5.34□□□□□ -1.55
PRKDC-202ENST00000338368 TGIF2LXQ8IUE1 241 aa5.34□□□□□ -1.55
PRKDC-202ENST00000338368 SLC25A10Q9UBX3 287 aaPredicted RBP5.34□□□□□ -1.55
PRKDC-202ENST00000338368 CBY1Q9Y3M2 126 aa5.34□□□□□ -1.55
PRKDC-202ENST00000338368 SIGLEC5O15389 551 aa5.34□□□□□ -1.55
PRKDC-202ENST00000338368 ORM1P02763 201 aa5.34□□□□□ -1.55
PRKDC-202ENST00000338368 SLC35E4Q6ICL7 350 aa5.34□□□□□ -1.55
PRKDC-202ENST00000338368 ZNF66Q6ZN08 573 aa5.34□□□□□ -1.55
PRKDC-202ENST00000338368 CMTM2Q8TAZ6 248 aa5.34□□□□□ -1.55
PRKDC-202ENST00000338368 LSM10Q969L4 123 aaKnown RBP5.34□□□□□ -1.55
PRKDC-202ENST00000338368 A0A1W2PPQ1 181 aa5.34□□□□□ -1.55
PRKDC-202ENST00000338368 ZNF705FA8MVS1 300 aaPredicted RBP5.34□□□□□ -1.55
PRKDC-202ENST00000338368 DVL1O14640 695 aa5.34□□□□□ -1.55
PRKDC-202ENST00000338368 ZNF705DP0CH99 300 aaPredicted RBP5.34□□□□□ -1.55
PRKDC-202ENST00000338368 ZNF705BP0CI00 300 aaPredicted RBP5.34□□□□□ -1.55
PRKDC-202ENST00000338368 PAX6P26367 422 aa5.34□□□□□ -1.55
PRKDC-202ENST00000338368 CALYQ9NYX4 217 aa5.34□□□□□ -1.55
PRKDC-202ENST00000338368 JPT1Q9UK76 154 aa5.34□□□□□ -1.55
PRKDC-202ENST00000338368 PITX3O75364 302 aa5.34□□□□□ -1.55
PRKDC-202ENST00000338368 F12P00748 615 aaPredicted RBP5.34□□□□□ -1.55
PRKDC-202ENST00000338368 RNF212Q495C1 297 aa5.34□□□□□ -1.55
PRKDC-202ENST00000338368 ZNRF1Q8ND25 227 aa5.34□□□□□ -1.55
PRKDC-202ENST00000338368 LILRB1Q8NHL6 650 aaPredicted RBP5.34□□□□□ -1.55
PRKDC-202ENST00000338368 PRNDQ9UKY0 176 aa5.34□□□□□ -1.55
PRKDC-202ENST00000338368 IGKV1D-13A0A0B4J2D9 117 aa5.34□□□□□ -1.55
PRKDC-202ENST00000338368 RAB29O14966 203 aa5.34□□□□□ -1.55
PRKDC-202ENST00000338368 IGKV1-13P0DP09 117 aa5.34□□□□□ -1.55
PRKDC-202ENST00000338368 RTN4RL2Q86UN3 420 aa5.34□□□□□ -1.55
PRKDC-202ENST00000338368 MRPL30Q8TCC3 161 aaKnown RBP5.34□□□□□ -1.55
PRKDC-202ENST00000338368 TLNRD1Q9H1K6 362 aa5.34□□□□□ -1.55
PRKDC-202ENST00000338368 ONECUT1Q9UBC0 465 aa5.34□□□□□ -1.55
PRKDC-202ENST00000338368 CCL21O00585 134 aa5.34□□□□□ -1.55
PRKDC-202ENST00000338368 ZG16O60844 167 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms