RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 STX12Q86Y82 276 aa7.39□□□□□ -1.23
SNCA-201ENST00000336904 SCRT1Q9BWW7 348 aa7.39□□□□□ -1.23
SNCA-201ENST00000336904 ARV1Q9H2C2 271 aa7.39□□□□□ -1.23
SNCA-201ENST00000336904 GNG13Q9P2W3 67 aa7.39□□□□□ -1.23
SNCA-201ENST00000336904 TP53TG5Q9Y2B4 290 aa7.39□□□□□ -1.23
SNCA-201ENST00000336904 CARHSP1Q9Y2V2 147 aaKnown RBP7.39□□□□□ -1.23
SNCA-201ENST00000336904 OPN1MWP04001 364 aa7.38□□□□□ -1.23
SNCA-201ENST00000336904 H2AFB1P0C5Y9 115 aa7.38□□□□□ -1.23
SNCA-201ENST00000336904 OPN1MW2P0DN77 364 aa7.38□□□□□ -1.23
SNCA-201ENST00000336904 OPN1MW3P0DN78 364 aa7.38□□□□□ -1.23
SNCA-201ENST00000336904 GNG10P50151 68 aa7.38□□□□□ -1.23
SNCA-201ENST00000336904 PEA15Q15121 130 aa7.38□□□□□ -1.23
SNCA-201ENST00000336904 C1orf229Q6ZS94 237 aaPredicted RBP7.38□□□□□ -1.23
SNCA-201ENST00000336904 LINC00596Q86U02 117 aa7.38□□□□□ -1.23
SNCA-201ENST00000336904 GCSAMQ8N6F7 178 aa7.38□□□□□ -1.23
SNCA-201ENST00000336904 MRPL37Q9BZE1 423 aaKnown RBP7.38□□□□□ -1.23
SNCA-201ENST00000336904 SLC25A31Q9H0C2 315 aa7.38□□□□□ -1.23
SNCA-201ENST00000336904 ZNF665Q9H7R5 613 aa7.38□□□□□ -1.23
SNCA-201ENST00000336904 MBNL3Q9NUK0 354 aaKnown RBP7.38□□□□□ -1.23
SNCA-201ENST00000336904 ODAMA1E959 279 aa7.38□□□□□ -1.23
SNCA-201ENST00000336904 H7C2Y5 167 aa7.38□□□□□ -1.23
SNCA-201ENST00000336904 FCGR3BO75015 233 aa7.38□□□□□ -1.23
SNCA-201ENST00000336904 TSPAN9O75954 239 aa7.38□□□□□ -1.23
SNCA-201ENST00000336904 ZNF266Q14584 549 aa7.38□□□□□ -1.23
SNCA-201ENST00000336904 AKR1C8PQ5T2L2 129 aa7.38□□□□□ -1.23
SNCA-201ENST00000336904 NCR3LG1Q68D85 454 aa7.38□□□□□ -1.23
SNCA-201ENST00000336904 SPSB3Q6PJ21 355 aa7.38□□□□□ -1.23
SNCA-201ENST00000336904 ASCL5Q7RTU5 278 aa7.38□□□□□ -1.23
SNCA-201ENST00000336904 Q8IYB0 196 aa7.38□□□□□ -1.23
SNCA-201ENST00000336904 TMPRSS5Q9H3S3 457 aa7.38□□□□□ -1.23
SNCA-201ENST00000336904 RBKSQ9H477 322 aa7.38□□□□□ -1.23
SNCA-201ENST00000336904 PRELID1Q9Y255 219 aa7.38□□□□□ -1.23
SNCA-201ENST00000336904 WIPI2Q9Y4P8 454 aa7.38□□□□□ -1.23
SNCA-201ENST00000336904 PLXNB1O43157 2135 aa7.38□□□□□ -1.23
SNCA-201ENST00000336904 C7orf77A4D0Y5 90 aa7.38□□□□□ -1.23
SNCA-201ENST00000336904 CLEC18AA5D8T8 446 aa7.38□□□□□ -1.23
SNCA-201ENST00000336904 CRYAAP02489 173 aa7.38□□□□□ -1.23
SNCA-201ENST00000336904 ZNF134P52741 427 aa7.38□□□□□ -1.23
SNCA-201ENST00000336904 DLX1P56177 255 aa7.38□□□□□ -1.23
SNCA-201ENST00000336904 RPL23AP62750 156 aaKnown RBP7.38□□□□□ -1.23
SNCA-201ENST00000336904 SMIM21Q3B7S5 101 aa7.38□□□□□ -1.23
SNCA-201ENST00000336904 FAM24BQ8N5W8 94 aa7.38□□□□□ -1.23
SNCA-201ENST00000336904 FAM216BQ8N7L0 139 aa7.38□□□□□ -1.23
SNCA-201ENST00000336904 CYB561D1Q8N8Q1 229 aa7.38□□□□□ -1.23
SNCA-201ENST00000336904 CLEC18CQ8NCF0 446 aa7.38□□□□□ -1.23
SNCA-201ENST00000336904 ATP5SQ99766 215 aa7.38□□□□□ -1.23
SNCA-201ENST00000336904 RPRMQ9NS64 109 aa7.38□□□□□ -1.23
SNCA-201ENST00000336904 TRAV3A0A0B4J244 114 aa7.37□□□□□ -1.23
SNCA-201ENST00000336904 AHRRA9YTQ3 701 aa7.37□□□□□ -1.23
SNCA-201ENST00000336904 PROP1O75360 226 aa7.37□□□□□ -1.23
SNCA-201ENST00000336904 MDH2P40926 338 aaKnown RBP7.37□□□□□ -1.23
SNCA-201ENST00000336904 UBE2KP61086 200 aa7.37□□□□□ -1.23
SNCA-201ENST00000336904 ADAM5Q6NVV9 412 aa7.37□□□□□ -1.23
SNCA-201ENST00000336904 ZNF343Q6P1L6 599 aa7.37□□□□□ -1.23
SNCA-201ENST00000336904 OR4C12Q96R67 309 aa7.37□□□□□ -1.23
SNCA-201ENST00000336904 CCL13Q99616 98 aa7.37□□□□□ -1.23
SNCA-201ENST00000336904 HES4Q9HCC6 221 aa7.37□□□□□ -1.23
SNCA-201ENST00000336904 LIN7CQ9NUP9 197 aaKnown RBP7.37□□□□□ -1.23
SNCA-201ENST00000336904 RAI1Q7Z5J4 1906 aaPredicted RBP7.37□□□□□ -1.23
SNCA-201ENST00000336904 TRBV6-6A0A0A6YYG2 114 aa7.37□□□□□ -1.23
SNCA-201ENST00000336904 IGLV1-44P01699 117 aa7.37□□□□□ -1.23
SNCA-201ENST00000336904 GYPAP02724 150 aa7.37□□□□□ -1.23
SNCA-201ENST00000336904 FAM87AP0C7U9 286 aa7.37□□□□□ -1.23
SNCA-201ENST00000336904 TFF3Q07654 80 aa7.37□□□□□ -1.23
SNCA-201ENST00000336904 C10orf91Q5T1B1 145 aa7.37□□□□□ -1.23
SNCA-201ENST00000336904 ZNF645Q8N7E2 425 aa7.37□□□□□ -1.23
SNCA-201ENST00000336904 GATAD1Q8WUU5 269 aa7.37□□□□□ -1.23
SNCA-201ENST00000336904 MUCL1Q96DR8 90 aa7.37□□□□□ -1.23
SNCA-201ENST00000336904 SLC25A22Q9H936 323 aa7.37□□□□□ -1.23
SNCA-201ENST00000336904 MMP24Q9Y5R2 645 aa7.37□□□□□ -1.23
SNCA-201ENST00000336904 OOEPA6NGQ2 149 aa7.36□□□□□ -1.23
SNCA-201ENST00000336904 TMEM210A6NLX4 147 aa7.36□□□□□ -1.23
SNCA-201ENST00000336904 M0R1X1 148 aa7.36□□□□□ -1.23
SNCA-201ENST00000336904 MMP23AO75900 390 aa7.36□□□□□ -1.23
SNCA-201ENST00000336904 PTAFRP25105 342 aa7.36□□□□□ -1.23
SNCA-201ENST00000336904 CCKARP32238 428 aa7.36□□□□□ -1.23
SNCA-201ENST00000336904 SULT1A1P50225 295 aa7.36□□□□□ -1.23
SNCA-201ENST00000336904 KLF3P57682 345 aaPredicted RBP7.36□□□□□ -1.23
SNCA-201ENST00000336904 RAB2AP61019 212 aa7.36□□□□□ -1.23
SNCA-201ENST00000336904 ZNF726P1Q15940 193 aa7.36□□□□□ -1.23
SNCA-201ENST00000336904 NEUROG1Q92886 237 aa7.36□□□□□ -1.23
SNCA-201ENST00000336904 QTRT1Q9BXR0 403 aaKnown RBP7.36□□□□□ -1.23
SNCA-201ENST00000336904 ZFP57Q9NU63 452 aa7.36□□□□□ -1.23
SNCA-201ENST00000336904 A0A1B0GU03 582 aa7.36□□□□□ -1.23
SNCA-201ENST00000336904 MBD3L4A6NDZ8 208 aaPredicted RBP7.36□□□□□ -1.23
SNCA-201ENST00000336904 MBD3L3A6NE82 208 aaPredicted RBP7.36□□□□□ -1.23
SNCA-201ENST00000336904 RBFOX3A6NFN3 312 aa7.36□□□□□ -1.23
SNCA-201ENST00000336904 MBD3L5A6NJ08 208 aaPredicted RBP7.36□□□□□ -1.23
SNCA-201ENST00000336904 CEBPZOSA8MTT3 80 aa7.36□□□□□ -1.23
SNCA-201ENST00000336904 IFNA5P01569 189 aa7.36□□□□□ -1.23
SNCA-201ENST00000336904 IGKV1D-33P01593 117 aa7.36□□□□□ -1.23
SNCA-201ENST00000336904 IGKV1-33P01594 117 aa7.36□□□□□ -1.23
SNCA-201ENST00000336904 SRSF7Q16629 238 aaKnown RBP eCLIP7.36□□□□□ -1.23
SNCA-201ENST00000336904 GCSAMLQ5JQS6 135 aa7.36□□□□□ -1.23
SNCA-201ENST00000336904 C1orf185Q5T7R7 199 aa7.36□□□□□ -1.23
SNCA-201ENST00000336904 DHRS7BQ6IAN0 325 aaPredicted RBP7.36□□□□□ -1.23
SNCA-201ENST00000336904 MOB1BQ7L9L4 216 aa7.36□□□□□ -1.23
SNCA-201ENST00000336904 MBD3L2Q8NHZ7 208 aaPredicted RBP7.36□□□□□ -1.23
SNCA-201ENST00000336904 HINT2Q9BX68 163 aa7.36□□□□□ -1.23
SNCA-201ENST00000336904 IFT22Q9H7X7 185 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms