RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 GALMQ96C23 342 aa10.52□□□□□ -0.73
LIMK1-201ENST00000336180 DPRXA6NFQ7 191 aa10.51□□□□□ -0.73
LIMK1-201ENST00000336180 RBMXL2O75526 392 aaKnown RBP10.51□□□□□ -0.73
LIMK1-201ENST00000336180 CDS2O95674 445 aa10.51□□□□□ -0.73
LIMK1-201ENST00000336180 HEXAP06865 529 aa10.51□□□□□ -0.73
LIMK1-201ENST00000336180 NFYBP25208 207 aa10.51□□□□□ -0.73
LIMK1-201ENST00000336180 EWSR1Q01844 656 aaKnown RBP eCLIP10.51□□□□□ -0.73
LIMK1-201ENST00000336180 Q8IYB0 196 aa10.51□□□□□ -0.73
LIMK1-201ENST00000336180 ANKHD1Q8IWZ3 2542 aaKnown RBP10.51□□□□□ -0.73
LIMK1-201ENST00000336180 E5RGE8 158 aa10.51□□□□□ -0.73
LIMK1-201ENST00000336180 IGKV1-5P01602 117 aa10.51□□□□□ -0.73
LIMK1-201ENST00000336180 PRH1P02810 166 aa10.51□□□□□ -0.73
LIMK1-201ENST00000336180 S100A8P05109 93 aa10.51□□□□□ -0.73
LIMK1-201ENST00000336180 FAM157CP0CG43 387 aa10.51□□□□□ -0.73
LIMK1-201ENST00000336180 SMIM21Q3B7S5 101 aa10.51□□□□□ -0.73
LIMK1-201ENST00000336180 Q6ZRG5 221 aa10.51□□□□□ -0.73
LIMK1-201ENST00000336180 LINC01560Q8TB33 94 aa10.51□□□□□ -0.73
LIMK1-201ENST00000336180 CLUHP3Q96NS8 147 aa10.51□□□□□ -0.73
LIMK1-201ENST00000336180 GNG12Q9UBI6 72 aa10.51□□□□□ -0.73
LIMK1-201ENST00000336180 TMEM210A6NLX4 147 aa10.5□□□□□ -0.73
LIMK1-201ENST00000336180 C17orf98A8MV24 154 aa10.5□□□□□ -0.73
LIMK1-201ENST00000336180 KRBOX1C9JBD0 128 aa10.5□□□□□ -0.73
LIMK1-201ENST00000336180 CIDEAO60543 219 aa10.5□□□□□ -0.73
LIMK1-201ENST00000336180 FGF2P09038 288 aa10.5□□□□□ -0.73
LIMK1-201ENST00000336180 CEACAM8P31997 349 aaPredicted RBP10.5□□□□□ -0.73
LIMK1-201ENST00000336180 TIMP3P35625 211 aa10.5□□□□□ -0.73
LIMK1-201ENST00000336180 DLX1P56177 255 aa10.5□□□□□ -0.73
LIMK1-201ENST00000336180 TNFAIP6P98066 277 aaPredicted RBP10.5□□□□□ -0.73
LIMK1-201ENST00000336180 ZNF585BQ52M93 769 aa10.5□□□□□ -0.73
LIMK1-201ENST00000336180 ZNF880Q6PDB4 577 aa10.5□□□□□ -0.73
LIMK1-201ENST00000336180 TCTEX1D2Q8WW35 142 aa10.5□□□□□ -0.73
LIMK1-201ENST00000336180 NINJ1Q92982 152 aa10.5□□□□□ -0.73
LIMK1-201ENST00000336180 TMED3Q9Y3Q3 217 aa10.5□□□□□ -0.73
LIMK1-201ENST00000336180 K7ENP7 123 aa10.5□□□□□ -0.73
LIMK1-201ENST00000336180 CDSNQ15517 529 aa10.5□□□□□ -0.73
LIMK1-201ENST00000336180 MST1LQ2TV78 715 aa10.5□□□□□ -0.73
LIMK1-201ENST00000336180 RPL39P5Q59GN2 51 aa10.5□□□□□ -0.73
LIMK1-201ENST00000336180 UNQ6494/PRO21346Q6UXR6 183 aa10.5□□□□□ -0.73
LIMK1-201ENST00000336180 OR5C1Q8NGR4 320 aa10.5□□□□□ -0.73
LIMK1-201ENST00000336180 RNF24Q9Y225 148 aa10.5□□□□□ -0.73
LIMK1-201ENST00000336180 C16orf97H3BN30 126 aa10.5□□□□□ -0.73
LIMK1-201ENST00000336180 CTXN2P0C2S0 81 aa10.5□□□□□ -0.73
LIMK1-201ENST00000336180 METTL15P1P0C7V9 234 aa10.5□□□□□ -0.73
LIMK1-201ENST00000336180 LYL1P12980 280 aa10.5□□□□□ -0.73
LIMK1-201ENST00000336180 UCP1P25874 307 aa10.5□□□□□ -0.73
LIMK1-201ENST00000336180 DYNLT3P51808 116 aa10.5□□□□□ -0.73
LIMK1-201ENST00000336180 NMSQ5H8A3 153 aa10.5□□□□□ -0.73
LIMK1-201ENST00000336180 MBNL2Q5VZF2 373 aaKnown RBP10.5□□□□□ -0.73
LIMK1-201ENST00000336180 OR2C3Q8N628 320 aa10.5□□□□□ -0.73
LIMK1-201ENST00000336180 HES4Q9HCC6 221 aa10.5□□□□□ -0.73
LIMK1-201ENST00000336180 CXorf65A6NEN9 183 aa10.49□□□□□ -0.73
LIMK1-201ENST00000336180 LYNX1G3V0Z9 82 aa10.49□□□□□ -0.73
LIMK1-201ENST00000336180 S1PR2O95136 353 aa10.49□□□□□ -0.73
LIMK1-201ENST00000336180 PLAUP00749 431 aa10.49□□□□□ -0.73
LIMK1-201ENST00000336180 IGHV1-46P01743 117 aa10.49□□□□□ -0.73
LIMK1-201ENST00000336180 THBDP07204 575 aa10.49□□□□□ -0.73
LIMK1-201ENST00000336180 LYNX1P0DP58 116 aa10.49□□□□□ -0.73
LIMK1-201ENST00000336180 AKR1C3P42330 323 aa10.49□□□□□ -0.73
LIMK1-201ENST00000336180 USF2Q15853 346 aaPredicted RBP10.49□□□□□ -0.73
LIMK1-201ENST00000336180 GUCA2BQ16661 112 aa10.49□□□□□ -0.73
LIMK1-201ENST00000336180 KRTCAP3Q53RY4 240 aa10.49□□□□□ -0.73
LIMK1-201ENST00000336180 LINC00596Q86U02 117 aa10.49□□□□□ -0.73
LIMK1-201ENST00000336180 LRRC46Q96FV0 321 aa10.49□□□□□ -0.73
LIMK1-201ENST00000336180 WFIKKN1Q96NZ8 548 aa10.49□□□□□ -0.73
LIMK1-201ENST00000336180 ATG101Q9BSB4 218 aa10.49□□□□□ -0.73
LIMK1-201ENST00000336180 SFXN3Q9BWM7 321 aa10.49□□□□□ -0.73
LIMK1-201ENST00000336180 POMT1Q9Y6A1 747 aa10.49□□□□□ -0.73
LIMK1-201ENST00000336180 A8MXK9 166 aa10.49□□□□□ -0.73
LIMK1-201ENST00000336180 C9JQL5 133 aa10.49□□□□□ -0.73
LIMK1-201ENST00000336180 OR4A8P0C604 315 aa10.49□□□□□ -0.73
LIMK1-201ENST00000336180 GLRXP35754 106 aa10.49□□□□□ -0.73
LIMK1-201ENST00000336180 CEBPGP53567 150 aa10.49□□□□□ -0.73
LIMK1-201ENST00000336180 RAB4BP61018 213 aa10.49□□□□□ -0.73
LIMK1-201ENST00000336180 NKX6-1P78426 367 aaPredicted RBP10.49□□□□□ -0.73
LIMK1-201ENST00000336180 ODF3L1Q8IXM7 274 aa10.49□□□□□ -0.73
LIMK1-201ENST00000336180 RNF141Q8WVD5 230 aa10.49□□□□□ -0.73
LIMK1-201ENST00000336180 TMEM56Q96MV1 263 aa10.49□□□□□ -0.73
LIMK1-201ENST00000336180 CABLES2Q9BTV7 478 aa10.49□□□□□ -0.73
LIMK1-201ENST00000336180 TMEM56-RWDD3S4R434 201 aa10.49□□□□□ -0.73
LIMK1-201ENST00000336180 BTBD17A6NE02 478 aa10.48□□□□□ -0.73
LIMK1-201ENST00000336180 LINC00473A8K010 186 aa10.48□□□□□ -0.73
LIMK1-201ENST00000336180 VDAC1P21796 283 aa10.48□□□□□ -0.73
LIMK1-201ENST00000336180 LY6DQ14210 128 aa10.48□□□□□ -0.73
LIMK1-201ENST00000336180 HMGN3Q15651 99 aa10.48□□□□□ -0.73
LIMK1-201ENST00000336180 Q5PR19 223 aa10.48□□□□□ -0.73
LIMK1-201ENST00000336180 Q6ZS49 121 aa10.48□□□□□ -0.73
LIMK1-201ENST00000336180 CCL17Q92583 94 aa10.48□□□□□ -0.73
LIMK1-201ENST00000336180 BOD1Q96IK1 185 aa10.48□□□□□ -0.73
LIMK1-201ENST00000336180 MBNL3Q9NUK0 354 aaKnown RBP10.48□□□□□ -0.73
LIMK1-201ENST00000336180 H0Y980 276 aa10.48□□□□□ -0.73
LIMK1-201ENST00000336180 ADCYAP1P18509 176 aa10.48□□□□□ -0.73
LIMK1-201ENST00000336180 OR2B8PP59922 312 aa10.48□□□□□ -0.73
LIMK1-201ENST00000336180 SPANXN5Q5MJ07 72 aa10.48□□□□□ -0.73
LIMK1-201ENST00000336180 SLC25A24Q6NUK1 477 aa10.48□□□□□ -0.73
LIMK1-201ENST00000336180 FAM90A1Q86YD7 464 aa10.48□□□□□ -0.73
LIMK1-201ENST00000336180 TMEM252Q8N6L7 170 aa10.48□□□□□ -0.73
LIMK1-201ENST00000336180 LRTM2Q8N967 370 aa10.48□□□□□ -0.73
LIMK1-201ENST00000336180 STOML3Q8TAV4 291 aa10.48□□□□□ -0.73
LIMK1-201ENST00000336180 FAM213BQ8TBF2 198 aa10.48□□□□□ -0.73
LIMK1-201ENST00000336180 FAM122AQ96E09 287 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms