RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 ELF5Q9UKW6 265 aaPredicted RBP12.82□□□□□ -0.36
C9orf47-201ENST00000334490 NTF3P20783 257 aa12.81□□□□□ -0.36
C9orf47-201ENST00000334490 CLEC7AQ9BXN2 247 aa12.81□□□□□ -0.36
C9orf47-201ENST00000334490 RPL8P62917 257 aaKnown RBP12.81□□□□□ -0.36
C9orf47-201ENST00000334490 PSG5Q15238 335 aa12.81□□□□□ -0.36
C9orf47-201ENST00000334490 LY6EQ16553 131 aa12.81□□□□□ -0.36
C9orf47-201ENST00000334490 TEPPQ6URK8 271 aa12.81□□□□□ -0.36
C9orf47-201ENST00000334490 SLC24A4Q8NFF2 622 aa12.81□□□□□ -0.36
C9orf47-201ENST00000334490 LILRB1Q8NHL6 650 aaPredicted RBP12.81□□□□□ -0.36
C9orf47-201ENST00000334490 NEU4Q8WWR8 484 aaPredicted RBP12.81□□□□□ -0.36
C9orf47-201ENST00000334490 REPIN1Q9BWE0 567 aaKnown RBP12.81□□□□□ -0.36
C9orf47-201ENST00000334490 TMEM167BQ9NRX6 74 aa12.81□□□□□ -0.36
C9orf47-201ENST00000334490 JPT1Q9UK76 154 aa12.81□□□□□ -0.36
C9orf47-201ENST00000334490 GPR132Q9UNW8 380 aa12.81□□□□□ -0.36
C9orf47-201ENST00000334490 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.81□□□□□ -0.36
C9orf47-201ENST00000334490 ZNF716A6NP11 495 aa12.81□□□□□ -0.36
C9orf47-201ENST00000334490 H0Y980 276 aa12.81□□□□□ -0.36
C9orf47-201ENST00000334490 RHBDL1O75783 438 aa12.81□□□□□ -0.36
C9orf47-201ENST00000334490 GNG4P50150 75 aa12.81□□□□□ -0.36
C9orf47-201ENST00000334490 SSTR5P35346 364 aa12.81□□□□□ -0.36
C9orf47-201ENST00000334490 SLC35B1P78383 322 aa12.81□□□□□ -0.36
C9orf47-201ENST00000334490 CLLU1Q5K131 121 aa12.81□□□□□ -0.36
C9orf47-201ENST00000334490 HCP5Q6MZN7 132 aa12.81□□□□□ -0.36
C9orf47-201ENST00000334490 TCTEX1D1Q8N7M0 179 aa12.81□□□□□ -0.36
C9orf47-201ENST00000334490 FAM222BQ8WU58 562 aa12.81□□□□□ -0.36
C9orf47-201ENST00000334490 STARD4Q96DR4 205 aa12.81□□□□□ -0.36
C9orf47-201ENST00000334490 USF3Q68DE3 2245 aa12.8□□□□□ -0.36
C9orf47-201ENST00000334490 CDRT15L2A8MXV6 281 aa12.8□□□□□ -0.36
C9orf47-201ENST00000334490 LOXL3P58215 753 aa12.8□□□□□ -0.36
C9orf47-201ENST00000334490 Q0VFX4 171 aa12.8□□□□□ -0.36
C9orf47-201ENST00000334490 PHYHIPLQ96FC7 376 aa12.8□□□□□ -0.36
C9orf47-201ENST00000334490 GAR1Q9NY12 217 aaKnown RBP12.8□□□□□ -0.36
C9orf47-201ENST00000334490 CLCF1Q9UBD9 225 aa12.8□□□□□ -0.36
C9orf47-201ENST00000334490 PCNX2A6NKB5 2137 aa12.8□□□□□ -0.36
C9orf47-201ENST00000334490 SFTA3P0C7M3 94 aa12.8□□□□□ -0.36
C9orf47-201ENST00000334490 C1QL2Q7Z5L3 287 aa12.8□□□□□ -0.36
C9orf47-201ENST00000334490 MYPOPQ86VE0 399 aaPredicted RBP12.8□□□□□ -0.36
C9orf47-201ENST00000334490 OR11H7Q8NGC8 314 aa12.8□□□□□ -0.36
C9orf47-201ENST00000334490 ST6GAL2Q96JF0 529 aa12.8□□□□□ -0.36
C9orf47-201ENST00000334490 ZG16O60844 167 aa12.8□□□□□ -0.36
C9orf47-201ENST00000334490 UNQ5815/PRO19632Q6UWF5 114 aa12.8□□□□□ -0.36
C9orf47-201ENST00000334490 WFDC3Q8IUB2 231 aa12.8□□□□□ -0.36
C9orf47-201ENST00000334490 TMEM222Q9H0R3 208 aa12.8□□□□□ -0.36
C9orf47-201ENST00000334490 MMP26Q9NRE1 261 aa12.8□□□□□ -0.36
C9orf47-201ENST00000334490 PGLYRP1O75594 196 aaPredicted RBP12.79□□□□□ -0.36
C9orf47-201ENST00000334490 CDKN1AP38936 164 aa12.79□□□□□ -0.36
C9orf47-201ENST00000334490 SIP14410 1827 aa12.79□□□□□ -0.36
C9orf47-201ENST00000334490 C17orf100A8MU93 164 aa12.79□□□□□ -0.36
C9orf47-201ENST00000334490 MMP7P09237 267 aaPredicted RBP12.79□□□□□ -0.36
C9orf47-201ENST00000334490 C10orf113Q5VZT2 155 aa12.79□□□□□ -0.36
C9orf47-201ENST00000334490 TMEM88Q6PEY1 159 aa12.79□□□□□ -0.36
C9orf47-201ENST00000334490 ACP7Q6ZNF0 438 aa12.79□□□□□ -0.36
C9orf47-201ENST00000334490 TLNRD1Q9H1K6 362 aa12.79□□□□□ -0.36
C9orf47-201ENST00000334490 PAFAH1B2P68402 229 aa12.79□□□□□ -0.36
C9orf47-201ENST00000334490 CALHM1Q8IU99 346 aa12.79□□□□□ -0.36
C9orf47-201ENST00000334490 FAM216BQ8N7L0 139 aa12.79□□□□□ -0.36
C9orf47-201ENST00000334490 FAM168AQ92567 244 aa12.79□□□□□ -0.36
C9orf47-201ENST00000334490 MSRB2Q9Y3D2 182 aa12.79□□□□□ -0.36
C9orf47-201ENST00000334490 EFNA2O43921 213 aa12.79□□□□□ -0.36
C9orf47-201ENST00000334490 MBPP02686 304 aaPredicted RBP12.79□□□□□ -0.36
C9orf47-201ENST00000334490 FOXF2Q12947 444 aa12.79□□□□□ -0.36
C9orf47-201ENST00000334490 TMEM241Q24JQ0 296 aa12.79□□□□□ -0.36
C9orf47-201ENST00000334490 FGFRL1Q8N441 504 aa12.79□□□□□ -0.36
C9orf47-201ENST00000334490 ZDHHC11Q9H8X9 412 aa12.79□□□□□ -0.36
C9orf47-201ENST00000334490 VSIG10L2P0DP72 767 aa12.78□□□□□ -0.36
C9orf47-201ENST00000334490 C4orf17Q53FE4 359 aa12.78□□□□□ -0.36
C9orf47-201ENST00000334490 PCSK4Q6UW60 755 aa12.78□□□□□ -0.36
C9orf47-201ENST00000334490 FAM208BQ5VWN6 2430 aa12.78□□□□□ -0.36
C9orf47-201ENST00000334490 SPCS3P61009 180 aa12.78□□□□□ -0.36
C9orf47-201ENST00000334490 LCN2P80188 198 aa12.78□□□□□ -0.36
C9orf47-201ENST00000334490 TMEM186Q96B77 213 aa12.78□□□□□ -0.36
C9orf47-201ENST00000334490 F5H697 171 aa12.78□□□□□ -0.36
C9orf47-201ENST00000334490 CD300CQ08708 224 aa12.78□□□□□ -0.36
C9orf47-201ENST00000334490 AANATQ16613 207 aa12.78□□□□□ -0.36
C9orf47-201ENST00000334490 SLC35E4Q6ICL7 350 aa12.78□□□□□ -0.36
C9orf47-201ENST00000334490 RGP1Q92546 391 aaPredicted RBP12.78□□□□□ -0.36
C9orf47-201ENST00000334490 GHITMQ9H3K2 345 aa12.78□□□□□ -0.36
C9orf47-201ENST00000334490 LYPD3O95274 346 aa12.77□□□□□ -0.36
C9orf47-201ENST00000334490 MST1P26927 711 aa12.77□□□□□ -0.36
C9orf47-201ENST00000334490 IFITM3Q01628 133 aa12.77□□□□□ -0.36
C9orf47-201ENST00000334490 NRIP2Q9BQI9 281 aa12.77□□□□□ -0.36
C9orf47-201ENST00000334490 SLC35B3Q9H1N7 401 aa12.77□□□□□ -0.36
C9orf47-201ENST00000334490 WNK2Q9Y3S1 2297 aa12.77□□□□□ -0.36
C9orf47-201ENST00000334490 TSTD3H0UI37 97 aa12.77□□□□□ -0.36
C9orf47-201ENST00000334490 H0YL77 283 aa12.77□□□□□ -0.36
C9orf47-201ENST00000334490 HAX1O00165 279 aa12.77□□□□□ -0.36
C9orf47-201ENST00000334490 SLC31A2O15432 143 aa12.77□□□□□ -0.36
C9orf47-201ENST00000334490 SPINK4O60575 86 aa12.77□□□□□ -0.37
C9orf47-201ENST00000334490 UNC119Q13432 240 aa12.77□□□□□ -0.37
C9orf47-201ENST00000334490 PDZD11Q5EBL8 140 aa12.77□□□□□ -0.37
C9orf47-201ENST00000334490 OR1L6Q8NGR2 347 aa12.77□□□□□ -0.37
C9orf47-201ENST00000334490 J3KRW8 73 aa12.77□□□□□ -0.37
C9orf47-201ENST00000334490 GATCO43716 136 aaKnown RBP12.77□□□□□ -0.37
C9orf47-201ENST00000334490 HTN1P15515 57 aa12.77□□□□□ -0.37
C9orf47-201ENST00000334490 TMEM30BQ3MIR4 351 aa12.77□□□□□ -0.37
C9orf47-201ENST00000334490 DHRS7BQ6IAN0 325 aaPredicted RBP12.77□□□□□ -0.37
C9orf47-201ENST00000334490 ZCCHC24Q8N2G6 241 aaKnown RBP12.77□□□□□ -0.37
C9orf47-201ENST00000334490 LINC00052Q96N35 136 aa12.77□□□□□ -0.37
C9orf47-201ENST00000334490 FREM3P0C091 2139 aa12.76□□□□□ -0.37
C9orf47-201ENST00000334490 CD1BP29016 333 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms