RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 C2orf54Q08AI8 447 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 ARL6IP1Q15041 203 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 ATP6AP1Q15904 470 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 CEACAM16Q2WEN9 425 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 TMEM176BQ3YBM2 270 aaPredicted RBP1.03□□□□□ -2.24
LINC00643-201ENST00000334389 AGKQ53H12 422 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 LINC00242Q5T6M2 205 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 Q5XG85 94 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 CFAP161Q6P656 301 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 MARCH3Q86UD3 253 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 COX18Q8N8Q8 333 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 UXS1Q8NBZ7 420 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 OR10V1Q8NGI7 309 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 OR52P1PQ8NH57 321 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 SPACA4Q8TDM5 124 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 DUSP19Q8WTR2 217 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 SLC38A5Q8WUX1 472 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 RNF133Q8WVZ7 376 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 RGP1Q92546 391 aaPredicted RBP1.03□□□□□ -2.24
LINC00643-201ENST00000334389 PIK3R3Q92569 461 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 RMI2Q96E14 147 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 YIPF6Q96EC8 236 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 GPR82Q96P67 336 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 SMIM14Q96QK8 99 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 OR52B2Q96RD2 323 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 PPA2Q9H2U2 334 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 OR51I1Q9H343 314 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 RIMS4Q9H426 269 aaPredicted RBP1.03□□□□□ -2.24
LINC00643-201ENST00000334389 EFCAB1Q9HAE3 211 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 TPT1P8Q9HAU6 139 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 TMEM27Q9HBJ8 222 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 SDF2L1Q9HCN8 221 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 CMC2Q9NRP2 79 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 SLC25A37Q9NYZ2 338 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 GRHPRQ9UBQ7 328 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 SLC25A10Q9UBX3 287 aaPredicted RBP1.03□□□□□ -2.24
LINC00643-201ENST00000334389 TMA7Q9Y2S6 64 aaKnown RBP1.03□□□□□ -2.24
LINC00643-201ENST00000334389 ARL2BPQ9Y2Y0 163 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 WDR45Q9Y484 360 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 A0A087X0K7 114 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 KBTBD11-OT1A0A1B0GTJ5 212 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 MEX3AA1L020 520 aaKnown RBP1.03□□□□□ -2.24
LINC00643-201ENST00000334389 CLIC1O00299 241 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 TOR1AO14656 332 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 CYB5BO43169 146 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 ZNF207O43670 478 aaKnown RBP1.03□□□□□ -2.24
LINC00643-201ENST00000334389 CRYZL1O95825 349 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 DBHP09172 617 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 RAP2AP10114 183 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 LAMP1P11279 417 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 B4GALT1P15291 398 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 GABRB1P18505 474 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 EDN2P20800 178 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 KDELR2P33947 212 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 MPV17P39210 176 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 INPP1P49441 399 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 TAS2R43P59537 309 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 SPCS3P61009 180 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 ZNF92Q03936 586 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 TRIM25Q14258 630 aaKnown RBP1.03□□□□□ -2.24
LINC00643-201ENST00000334389 PRAMEF20Q5VT98 475 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 C9orf135Q5VTT2 229 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 FAAP20Q6NZ36 180 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 WDR73Q6P4I2 378 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 TTC33Q6PID6 262 aaPredicted RBP1.03□□□□□ -2.24
LINC00643-201ENST00000334389 BAIAP2L2Q6UXY1 529 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 NECAP1Q8NC96 275 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 ZNF485Q8NCK3 441 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 GPR32P1Q8NGA4 272 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 OR1J1Q8NGS3 322 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 PP6455Q8WZ26 134 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 DCUN1D4Q92564 292 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 CNOT9Q92600 299 aaKnown RBP1.03□□□□□ -2.24
LINC00643-201ENST00000334389 MCHR2Q969V1 340 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 SPTSSAQ969W0 71 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 TAMM41Q96BW9 452 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 SLC35E1Q96K37 410 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 CXorf58Q96LI9 332 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 TEX37Q96LM6 180 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 OR5B12Q96R08 314 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 OR8B4Q96RC9 309 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 MTERF1Q99551 399 aaKnown RBP1.03□□□□□ -2.24
LINC00643-201ENST00000334389 TSNAXQ99598 290 aaKnown RBP1.03□□□□□ -2.24
LINC00643-201ENST00000334389 ZNF184Q99676 751 aaPredicted RBP1.03□□□□□ -2.24
LINC00643-201ENST00000334389 NPAS1Q99742 590 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 SLC29A1Q99808 456 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 SEC22CQ9BRL7 303 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 SLC35A5Q9BS91 424 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 CCDC32Q9BV29 185 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 THUMPD3Q9BV44 507 aaKnown RBP1.03□□□□□ -2.24
LINC00643-201ENST00000334389 SRD5A3Q9H8P0 318 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 GALNT9Q9HCQ5 603 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 ERVK13-1Q9NX77 482 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 GFOD1Q9NXC2 390 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 IDI2-AS1Q9NZ38 188 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 LINC00474Q9P2X8 69 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 TAGLN3Q9UI15 199 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 LAMP5Q9UJQ1 280 aa1.03□□□□□ -2.24
LINC00643-201ENST00000334389 TRAV8-1A0A0A6YYK1 113 aa1.02□□□□□ -2.25
LINC00643-201ENST00000334389 TRAV41A0A0B4J266 112 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms