RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 OR6C3Q9NZP0 311 aa19.93■□□□□ 0.78
TSKU-201ENST00000333090 CLN8Q9UBY8 286 aa19.93■□□□□ 0.78
TSKU-201ENST00000333090 PRRC2CQ9Y520 2896 aaKnown RBP19.93■□□□□ 0.78
TSKU-201ENST00000333090 GALR2O43603 387 aaPredicted RBP19.93■□□□□ 0.78
TSKU-201ENST00000333090 PAX5Q02548 391 aa19.93■□□□□ 0.78
TSKU-201ENST00000333090 MANBALQ9NQG1 85 aa19.93■□□□□ 0.78
TSKU-201ENST00000333090 USF3Q68DE3 2245 aa19.92■□□□□ 0.78
TSKU-201ENST00000333090 IFNL4K9M1U5 179 aa19.92■□□□□ 0.78
TSKU-201ENST00000333090 LPAL2Q16609 132 aa19.92■□□□□ 0.78
TSKU-201ENST00000333090 MED12LQ86YW9 2145 aa19.92■□□□□ 0.78
TSKU-201ENST00000333090 RAMP3O60896 148 aa19.92■□□□□ 0.78
TSKU-201ENST00000333090 GGCTO75223 188 aaKnown RBP19.92■□□□□ 0.78
TSKU-201ENST00000333090 POM121L2Q96KW2 1035 aa19.92■□□□□ 0.78
TSKU-201ENST00000333090 GPR179Q6PRD1 2367 aa19.92■□□□□ 0.78
TSKU-201ENST00000333090 OR5B21A6NL26 309 aa19.91■□□□□ 0.78
TSKU-201ENST00000333090 C1QTNF9BB2RNN3 333 aa19.91■□□□□ 0.78
TSKU-201ENST00000333090 FAM90A26D6RGX4 464 aa19.91■□□□□ 0.78
TSKU-201ENST00000333090 SS18L1O75177 396 aaPredicted RBP19.91■□□□□ 0.78
TSKU-201ENST00000333090 G6PCP35575 357 aa19.91■□□□□ 0.78
TSKU-201ENST00000333090 TFF3Q07654 80 aa19.91■□□□□ 0.78
TSKU-201ENST00000333090 Q6P435 159 aa19.91■□□□□ 0.78
TSKU-201ENST00000333090 NEIL1Q96FI4 390 aaPredicted RBP19.91■□□□□ 0.78
TSKU-201ENST00000333090 ATG101Q9BSB4 218 aa19.91■□□□□ 0.78
TSKU-201ENST00000333090 TMEM147Q9BVK8 224 aa19.91■□□□□ 0.78
TSKU-201ENST00000333090 AURKAIP1Q9NWT8 199 aaPredicted RBP19.91■□□□□ 0.78
TSKU-201ENST00000333090 LOC400499M0QZD8 3231 aa19.91■□□□□ 0.78
TSKU-201ENST00000333090 COX5BP10606 129 aa19.9■□□□□ 0.78
TSKU-201ENST00000333090 NUTF2P61970 127 aaKnown RBP19.9■□□□□ 0.78
TSKU-201ENST00000333090 IQCJQ1A5X6 159 aa19.9■□□□□ 0.78
TSKU-201ENST00000333090 SPATA46Q5T0L3 261 aa19.9■□□□□ 0.78
TSKU-201ENST00000333090 CISD2Q8N5K1 135 aaKnown RBP19.9■□□□□ 0.78
TSKU-201ENST00000333090 LINC00470Q9BZP3 86 aa19.9■□□□□ 0.78
TSKU-201ENST00000333090 MPC1Q9Y5U8 109 aa19.9■□□□□ 0.78
TSKU-201ENST00000333090 NCOR1O75376 2440 aa19.9■□□□□ 0.78
TSKU-201ENST00000333090 OR2H2O95918 312 aa19.9■□□□□ 0.78
TSKU-201ENST00000333090 MBP02144 154 aa19.9■□□□□ 0.78
TSKU-201ENST00000333090 COX5AP20674 150 aa19.9■□□□□ 0.78
TSKU-201ENST00000333090 BMP5P22003 454 aa19.9■□□□□ 0.78
TSKU-201ENST00000333090 SRP14P37108 136 aaKnown RBP19.9■□□□□ 0.78
TSKU-201ENST00000333090 CNN1P51911 297 aaKnown RBP19.9■□□□□ 0.78
TSKU-201ENST00000333090 ZNF816Q0VGE8 651 aaPredicted RBP19.9■□□□□ 0.78
TSKU-201ENST00000333090 FAM78BQ5VT40 261 aa19.9■□□□□ 0.78
TSKU-201ENST00000333090 KCNIP4Q6PIL6 250 aa19.9■□□□□ 0.78
TSKU-201ENST00000333090 MOB1BQ7L9L4 216 aa19.9■□□□□ 0.78
TSKU-201ENST00000333090 NEU1Q99519 415 aa19.9■□□□□ 0.78
TSKU-201ENST00000333090 HSPB7Q9UBY9 170 aa19.9■□□□□ 0.78
TSKU-201ENST00000333090 URB1O60287 2271 aaKnown RBP19.89■□□□□ 0.78
TSKU-201ENST00000333090 PLP2Q04941 152 aa19.89■□□□□ 0.78
TSKU-201ENST00000333090 PILRBQ9UKJ0 227 aa19.89■□□□□ 0.78
TSKU-201ENST00000333090 IGKV3D-15A0A087WSY6 115 aa19.89■□□□□ 0.77
TSKU-201ENST00000333090 IGHV3-64DA0A0J9YX35 117 aa19.89■□□□□ 0.77
TSKU-201ENST00000333090 C11orf94C9JXX5 98 aa19.89■□□□□ 0.77
TSKU-201ENST00000333090 EGR1P18146 543 aa19.89■□□□□ 0.77
TSKU-201ENST00000333090 CYB561P49447 251 aa19.89■□□□□ 0.77
TSKU-201ENST00000333090 ZNF497Q6ZNH5 498 aa19.89■□□□□ 0.77
TSKU-201ENST00000333090 MRPL37Q9BZE1 423 aaKnown RBP19.89■□□□□ 0.77
TSKU-201ENST00000333090 CACNA1DQ01668 2161 aa19.89■□□□□ 0.77
TSKU-201ENST00000333090 SCGB1D1O95968 90 aa19.89■□□□□ 0.77
TSKU-201ENST00000333090 TYMSP04818 313 aa19.89■□□□□ 0.77
TSKU-201ENST00000333090 OR10P1Q8NGE3 313 aa19.89■□□□□ 0.77
TSKU-201ENST00000333090 AHCTF1Q8WYP5 2266 aa19.88■□□□□ 0.77
TSKU-201ENST00000333090 DNAJC13O75165 2243 aa19.88■□□□□ 0.77
TSKU-201ENST00000333090 NPPCP23582 126 aa19.88■□□□□ 0.77
TSKU-201ENST00000333090 CCKARP32238 428 aa19.88■□□□□ 0.77
TSKU-201ENST00000333090 WNT5AP41221 380 aa19.88■□□□□ 0.77
TSKU-201ENST00000333090 SPINK14Q6IE38 97 aa19.88■□□□□ 0.77
TSKU-201ENST00000333090 TEX38Q6PEX7 206 aa19.88■□□□□ 0.77
TSKU-201ENST00000333090 GBGT1Q8N5D6 347 aa19.88■□□□□ 0.77
TSKU-201ENST00000333090 ZNF709Q8N972 641 aa19.88■□□□□ 0.77
TSKU-201ENST00000333090 NPCDR1Q9BY65 106 aa19.88■□□□□ 0.77
TSKU-201ENST00000333090 ZG16O60844 167 aa19.88■□□□□ 0.77
TSKU-201ENST00000333090 IL3RAP26951 378 aa19.88■□□□□ 0.77
TSKU-201ENST00000333090 PPP1R32Q7Z5V6 425 aa19.88■□□□□ 0.77
TSKU-201ENST00000333090 ZDHHC16Q969W1 377 aa19.88■□□□□ 0.77
TSKU-201ENST00000333090 PKIBQ9C010 78 aa19.88■□□□□ 0.77
TSKU-201ENST00000333090 CBLN4Q9NTU7 201 aa19.88■□□□□ 0.77
TSKU-201ENST00000333090 RNF212BA8MTL3 300 aa19.87■□□□□ 0.77
TSKU-201ENST00000333090 J3QT63 122 aa19.87■□□□□ 0.77
TSKU-201ENST00000333090 VENTXO95231 258 aa19.87■□□□□ 0.77
TSKU-201ENST00000333090 CRYAAP02489 173 aa19.87■□□□□ 0.77
TSKU-201ENST00000333090 CELA3AP09093 270 aa19.87■□□□□ 0.77
TSKU-201ENST00000333090 MSMO1Q15800 293 aa19.87■□□□□ 0.77
TSKU-201ENST00000333090 ATP6V1FQ16864 119 aa19.87■□□□□ 0.77
TSKU-201ENST00000333090 PMS2CLQ68D20 193 aa19.87■□□□□ 0.77
TSKU-201ENST00000333090 ZNF808Q8N4W9 903 aaPredicted RBP19.87■□□□□ 0.77
TSKU-201ENST00000333090 ODAMA1E959 279 aa19.87■□□□□ 0.77
TSKU-201ENST00000333090 SYNGR4O95473 234 aa19.87■□□□□ 0.77
TSKU-201ENST00000333090 MPLP40238 635 aa19.87■□□□□ 0.77
TSKU-201ENST00000333090 RAB4BP61018 213 aa19.87■□□□□ 0.77
TSKU-201ENST00000333090 SPINK9Q5DT21 86 aa19.87■□□□□ 0.77
TSKU-201ENST00000333090 OR1L1Q8NH94 360 aa19.87■□□□□ 0.77
TSKU-201ENST00000333090 A0A0U1RQK1 487 aa19.86■□□□□ 0.77
TSKU-201ENST00000333090 A0A1B0GUS0 222 aa19.86■□□□□ 0.77
TSKU-201ENST00000333090 ZNF320A2RRD8 509 aa19.86■□□□□ 0.77
TSKU-201ENST00000333090 ARR3P36575 388 aa19.86■□□□□ 0.77
TSKU-201ENST00000333090 SNHG12Q9BXW3 62 aa19.86■□□□□ 0.77
TSKU-201ENST00000333090 OR2D2Q9H210 308 aa19.86■□□□□ 0.77
TSKU-201ENST00000333090 LRRC30A6NM36 301 aa19.86■□□□□ 0.77
TSKU-201ENST00000333090 RBMXL2O75526 392 aaKnown RBP19.86■□□□□ 0.77
TSKU-201ENST00000333090 UBE2G2P60604 165 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms