RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.85□□□□□ -0.83
TRIM49B-201ENST00000332682 TNFRSF14Q92956 283 aa9.85□□□□□ -0.83
TRIM49B-201ENST00000332682 CLEC7AQ9BXN2 247 aa9.85□□□□□ -0.83
TRIM49B-201ENST00000332682 REG4Q9BYZ8 158 aa9.85□□□□□ -0.83
TRIM49B-201ENST00000332682 MED28Q9H204 178 aa9.85□□□□□ -0.83
TRIM49B-201ENST00000332682 PIPOXQ9P0Z9 390 aa9.85□□□□□ -0.83
TRIM49B-201ENST00000332682 INSIG2Q9Y5U4 225 aa9.85□□□□□ -0.83
TRIM49B-201ENST00000332682 A0A0B4J2A0 478 aa9.84□□□□□ -0.83
TRIM49B-201ENST00000332682 HMX3A6NHT5 357 aa9.84□□□□□ -0.83
TRIM49B-201ENST00000332682 B4DSR2 109 aa9.84□□□□□ -0.83
TRIM49B-201ENST00000332682 H0Y980 276 aa9.84□□□□□ -0.83
TRIM49B-201ENST00000332682 SULT1A3P0DMM9 295 aa9.84□□□□□ -0.83
TRIM49B-201ENST00000332682 SULT1A4P0DMN0 295 aa9.84□□□□□ -0.83
TRIM49B-201ENST00000332682 ANXA3P12429 323 aa9.84□□□□□ -0.83
TRIM49B-201ENST00000332682 TMEM187Q14656 261 aa9.84□□□□□ -0.83
TRIM49B-201ENST00000332682 HLA-DRB5Q30154 266 aa9.84□□□□□ -0.83
TRIM49B-201ENST00000332682 HCP5Q6MZN7 132 aa9.84□□□□□ -0.83
TRIM49B-201ENST00000332682 LIN54Q6MZP7 749 aa9.84□□□□□ -0.83
TRIM49B-201ENST00000332682 C11orf88Q6PI97 169 aa9.84□□□□□ -0.83
TRIM49B-201ENST00000332682 VMO1Q7Z5L0 202 aa9.84□□□□□ -0.83
TRIM49B-201ENST00000332682 PNKDQ8N490 385 aa9.84□□□□□ -0.83
TRIM49B-201ENST00000332682 OR11H7Q8NGC8 314 aa9.84□□□□□ -0.83
TRIM49B-201ENST00000332682 GLYATL2Q8WU03 294 aa9.84□□□□□ -0.83
TRIM49B-201ENST00000332682 PHB2Q99623 299 aa9.84□□□□□ -0.83
TRIM49B-201ENST00000332682 FOXC2Q99958 501 aa9.84□□□□□ -0.83
TRIM49B-201ENST00000332682 SHPKQ9UHJ6 478 aa9.84□□□□□ -0.83
TRIM49B-201ENST00000332682 KCNIP3Q9Y2W7 256 aa9.84□□□□□ -0.83
TRIM49B-201ENST00000332682 CSMD1Q96PZ7 3565 aa9.83□□□□□ -0.84
TRIM49B-201ENST00000332682 DBX1A6NMT0 343 aa9.83□□□□□ -0.84
TRIM49B-201ENST00000332682 LINC00473A8K010 186 aa9.83□□□□□ -0.84
TRIM49B-201ENST00000332682 RNF212BA8MTL3 300 aa9.83□□□□□ -0.84
TRIM49B-201ENST00000332682 M0R1X1 148 aa9.83□□□□□ -0.84
TRIM49B-201ENST00000332682 TOR1AO14656 332 aa9.83□□□□□ -0.84
TRIM49B-201ENST00000332682 CXCL3P19876 107 aa9.83□□□□□ -0.84
TRIM49B-201ENST00000332682 UCP1P25874 307 aa9.83□□□□□ -0.84
TRIM49B-201ENST00000332682 DUTP33316 252 aaKnown RBP9.83□□□□□ -0.84
TRIM49B-201ENST00000332682 ZNF137PP52743 207 aa9.83□□□□□ -0.84
TRIM49B-201ENST00000332682 LINC00205P59089 165 aa9.83□□□□□ -0.84
TRIM49B-201ENST00000332682 RPL30P62888 115 aaKnown RBP9.83□□□□□ -0.84
TRIM49B-201ENST00000332682 KLRD1Q13241 179 aa9.83□□□□□ -0.84
TRIM49B-201ENST00000332682 C2orf68Q2NKX9 166 aa9.83□□□□□ -0.84
TRIM49B-201ENST00000332682 ZNF66Q6ZN08 573 aa9.83□□□□□ -0.84
TRIM49B-201ENST00000332682 ZNF833PQ6ZTB9 187 aa9.83□□□□□ -0.84
TRIM49B-201ENST00000332682 DRAXINQ8NBI3 349 aaPredicted RBP9.83□□□□□ -0.84
TRIM49B-201ENST00000332682 UXS1Q8NBZ7 420 aa9.83□□□□□ -0.84
TRIM49B-201ENST00000332682 MAPK1IP1LQ8NDC0 245 aa9.83□□□□□ -0.84
TRIM49B-201ENST00000332682 BEND2Q8NDZ0 799 aa9.83□□□□□ -0.84
TRIM49B-201ENST00000332682 WFDC11Q8NEX6 87 aa9.83□□□□□ -0.84
TRIM49B-201ENST00000332682 OR11H6Q8NGC7 330 aa9.83□□□□□ -0.84
TRIM49B-201ENST00000332682 OR4P4Q8NGL7 312 aa9.83□□□□□ -0.84
TRIM49B-201ENST00000332682 OR13D1Q8NGV5 346 aa9.83□□□□□ -0.84
TRIM49B-201ENST00000332682 OR10X1Q8NGY0 326 aa9.83□□□□□ -0.84
TRIM49B-201ENST00000332682 COQ8AQ8NI60 647 aa9.83□□□□□ -0.84
TRIM49B-201ENST00000332682 LHFPL5Q8TAF8 219 aa9.83□□□□□ -0.84
TRIM49B-201ENST00000332682 MSI2Q96DH6 328 aaKnown RBP9.83□□□□□ -0.84
TRIM49B-201ENST00000332682 TBX15Q96SF7 602 aa9.83□□□□□ -0.84
TRIM49B-201ENST00000332682 HSD17B10Q99714 261 aaKnown RBP9.83□□□□□ -0.84
TRIM49B-201ENST00000332682 PCGF1Q9BSM1 259 aa9.83□□□□□ -0.84
TRIM49B-201ENST00000332682 TMEM222Q9H0R3 208 aa9.83□□□□□ -0.84
TRIM49B-201ENST00000332682 LIN7CQ9NUP9 197 aaKnown RBP9.83□□□□□ -0.84
TRIM49B-201ENST00000332682 ITPR3Q14573 2671 aa9.83□□□□□ -0.84
TRIM49B-201ENST00000332682 ODF3BA8MYP8 253 aa9.82□□□□□ -0.84
TRIM49B-201ENST00000332682 RNASEK-C17orf49H0YIS7 233 aa9.82□□□□□ -0.84
TRIM49B-201ENST00000332682 B3GALNT1O75752 331 aa9.82□□□□□ -0.84
TRIM49B-201ENST00000332682 TOX4O94842 621 aa9.82□□□□□ -0.84
TRIM49B-201ENST00000332682 ZNF16P17020 682 aaPredicted RBP9.82□□□□□ -0.84
TRIM49B-201ENST00000332682 HOXB4P17483 251 aaPredicted RBP9.82□□□□□ -0.84
TRIM49B-201ENST00000332682 PRRX1P54821 245 aa9.82□□□□□ -0.84
TRIM49B-201ENST00000332682 PAX8Q06710 450 aa9.82□□□□□ -0.84
TRIM49B-201ENST00000332682 CATR1Q13166 79 aa9.82□□□□□ -0.84
TRIM49B-201ENST00000332682 FAM71F2Q6NXP2 309 aa9.82□□□□□ -0.84
TRIM49B-201ENST00000332682 LIAT1Q6ZQX7 453 aa9.82□□□□□ -0.84
TRIM49B-201ENST00000332682 LRTM2Q8N967 370 aa9.82□□□□□ -0.84
TRIM49B-201ENST00000332682 TCTEX1D2Q8WW35 142 aa9.82□□□□□ -0.84
TRIM49B-201ENST00000332682 ST6GALNAC6Q969X2 333 aa9.82□□□□□ -0.84
TRIM49B-201ENST00000332682 NEURL2Q9BR09 285 aa9.82□□□□□ -0.84
TRIM49B-201ENST00000332682 HEXA-AS1Q9H8Q6 139 aa9.82□□□□□ -0.84
TRIM49B-201ENST00000332682 BRWD1-AS2P59051 145 aa9.82□□□□□ -0.84
TRIM49B-201ENST00000332682 SRPXP78539 464 aa9.82□□□□□ -0.84
TRIM49B-201ENST00000332682 CD300CQ08708 224 aa9.82□□□□□ -0.84
TRIM49B-201ENST00000332682 NCR3LG1Q68D85 454 aa9.82□□□□□ -0.84
TRIM49B-201ENST00000332682 LGI3Q8N145 548 aa9.82□□□□□ -0.84
TRIM49B-201ENST00000332682 LINC01356Q8N9X3 169 aa9.82□□□□□ -0.84
TRIM49B-201ENST00000332682 DDB2Q92466 427 aa9.82□□□□□ -0.84
TRIM49B-201ENST00000332682 TMEM186Q96B77 213 aa9.82□□□□□ -0.84
TRIM49B-201ENST00000332682 TMEM56Q96MV1 263 aa9.82□□□□□ -0.84
TRIM49B-201ENST00000332682 S1PR3Q99500 378 aa9.82□□□□□ -0.84
TRIM49B-201ENST00000332682 MGAT4CQ9UBM8 478 aa9.82□□□□□ -0.84
TRIM49B-201ENST00000332682 TMEM56-RWDD3S4R434 201 aa9.82□□□□□ -0.84
TRIM49B-201ENST00000332682 TRAV20A0A0B4J274 112 aa9.81□□□□□ -0.84
TRIM49B-201ENST00000332682 A8MV72 311 aaPredicted RBP9.81□□□□□ -0.84
TRIM49B-201ENST00000332682 BUB1B-PAK6H3BSN5 160 aa9.81□□□□□ -0.84
TRIM49B-201ENST00000332682 GOSR2O14653 212 aa9.81□□□□□ -0.84
TRIM49B-201ENST00000332682 RAMP3O60896 148 aa9.81□□□□□ -0.84
TRIM49B-201ENST00000332682 PFDN1O60925 122 aa9.81□□□□□ -0.84
TRIM49B-201ENST00000332682 ADAP1O75689 374 aa9.81□□□□□ -0.84
TRIM49B-201ENST00000332682 CDS2O95674 445 aa9.81□□□□□ -0.84
TRIM49B-201ENST00000332682 SERPINE2P07093 398 aa9.81□□□□□ -0.84
TRIM49B-201ENST00000332682 HLA-GP17693 338 aa9.81□□□□□ -0.84
TRIM49B-201ENST00000332682 IL3RAP26951 378 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms