RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 DCHS2Q6V1P9 2916 aa13.34□□□□□ -0.27
PDGFB-201ENST00000331163 ANKRD17O75179 2603 aaKnown RBP13.34□□□□□ -0.27
PDGFB-201ENST00000331163 CXorf65A6NEN9 183 aa13.34□□□□□ -0.27
PDGFB-201ENST00000331163 H3BP45 60 aa13.34□□□□□ -0.27
PDGFB-201ENST00000331163 PSG2P11465 335 aa13.34□□□□□ -0.27
PDGFB-201ENST00000331163 RPL12P30050 165 aaKnown RBP13.34□□□□□ -0.27
PDGFB-201ENST00000331163 TCEAL7Q9BRU2 100 aa13.34□□□□□ -0.27
PDGFB-201ENST00000331163 ONECUT1Q9UBC0 465 aa13.34□□□□□ -0.27
PDGFB-201ENST00000331163 DSCAMO60469 2012 aa13.34□□□□□ -0.27
PDGFB-201ENST00000331163 TRAV24A0A0B4J272 114 aa13.34□□□□□ -0.27
PDGFB-201ENST00000331163 C17orf100A8MU93 164 aa13.34□□□□□ -0.27
PDGFB-201ENST00000331163 AP4M1O00189 453 aa13.34□□□□□ -0.27
PDGFB-201ENST00000331163 KRASP01116 189 aa13.34□□□□□ -0.27
PDGFB-201ENST00000331163 HEXAP06865 529 aa13.34□□□□□ -0.27
PDGFB-201ENST00000331163 TMEM128Q5BJH2 165 aa13.34□□□□□ -0.27
PDGFB-201ENST00000331163 C1orf87Q8N0U7 546 aa13.34□□□□□ -0.27
PDGFB-201ENST00000331163 ASB13Q8WXK3 278 aa13.34□□□□□ -0.27
PDGFB-201ENST00000331163 PERPQ96FX8 193 aa13.34□□□□□ -0.27
PDGFB-201ENST00000331163 PLXNB1O43157 2135 aa13.34□□□□□ -0.27
PDGFB-201ENST00000331163 KIR2DS1A0A191URI9 304 aa13.33□□□□□ -0.27
PDGFB-201ENST00000331163 TMEM30CPA0ZSE6 113 aa13.33□□□□□ -0.27
PDGFB-201ENST00000331163 NKX6-3A6NJ46 265 aa13.33□□□□□ -0.27
PDGFB-201ENST00000331163 KIR2DS4P43632 304 aa13.33□□□□□ -0.27
PDGFB-201ENST00000331163 SULT1A1P50225 295 aa13.33□□□□□ -0.27
PDGFB-201ENST00000331163 KIR2DS1Q14954 304 aa13.33□□□□□ -0.27
PDGFB-201ENST00000331163 GUK1Q16774 197 aa13.33□□□□□ -0.27
PDGFB-201ENST00000331163 CYB5R2Q6BCY4 276 aa13.33□□□□□ -0.27
PDGFB-201ENST00000331163 LYG1Q8N1E2 194 aa13.33□□□□□ -0.27
PDGFB-201ENST00000331163 FAM213BQ8TBF2 198 aa13.33□□□□□ -0.27
PDGFB-201ENST00000331163 OR2D2Q9H210 308 aa13.33□□□□□ -0.27
PDGFB-201ENST00000331163 OR2C1O95371 312 aa13.33□□□□□ -0.28
PDGFB-201ENST00000331163 DVL1P1P54792 670 aaPredicted RBP13.33□□□□□ -0.28
PDGFB-201ENST00000331163 Q3ZCU0 254 aa13.33□□□□□ -0.28
PDGFB-201ENST00000331163 PRSS54Q6PEW0 395 aa13.33□□□□□ -0.28
PDGFB-201ENST00000331163 PPIAL4EA0A075B759 164 aa13.33□□□□□ -0.28
PDGFB-201ENST00000331163 PPIAL4DF5H284 164 aa13.33□□□□□ -0.28
PDGFB-201ENST00000331163 UBE2CO00762 179 aa13.33□□□□□ -0.28
PDGFB-201ENST00000331163 PPIAL4FP0DN26 164 aa13.33□□□□□ -0.28
PDGFB-201ENST00000331163 APOBEC3AP31941 199 aaPredicted RBP13.33□□□□□ -0.28
PDGFB-201ENST00000331163 GAPTQ8N292 157 aa13.33□□□□□ -0.28
PDGFB-201ENST00000331163 C5orf66Q9H5L9 145 aa13.33□□□□□ -0.28
PDGFB-201ENST00000331163 GCM1Q9NP62 436 aa13.33□□□□□ -0.28
PDGFB-201ENST00000331163 CACFD1Q9UGQ2 172 aa13.33□□□□□ -0.28
PDGFB-201ENST00000331163 PPIAL4AQ9Y536 164 aa13.33□□□□□ -0.28
PDGFB-201ENST00000331163 KPTNQ9Y664 436 aa13.33□□□□□ -0.28
PDGFB-201ENST00000331163 IGHV3OR16-10A0A075B7F0 116 aa13.32□□□□□ -0.28
PDGFB-201ENST00000331163 IGHV3-72A0A0B4J1Y9 119 aa13.32□□□□□ -0.28
PDGFB-201ENST00000331163 OR5AC1P0C628 307 aa13.32□□□□□ -0.28
PDGFB-201ENST00000331163 TMEM33P57088 247 aa13.32□□□□□ -0.28
PDGFB-201ENST00000331163 RPL31P62899 125 aaKnown RBP13.32□□□□□ -0.28
PDGFB-201ENST00000331163 EIF5AP63241 154 aaKnown RBP13.32□□□□□ -0.28
PDGFB-201ENST00000331163 QRFPP83859 136 aa13.32□□□□□ -0.28
PDGFB-201ENST00000331163 GNMTQ14749 295 aa13.32□□□□□ -0.28
PDGFB-201ENST00000331163 PNLIPRP3Q17RR3 467 aa13.32□□□□□ -0.28
PDGFB-201ENST00000331163 TMEM268Q5VZI3 342 aa13.32□□□□□ -0.28
PDGFB-201ENST00000331163 TMEM42Q69YG0 159 aa13.32□□□□□ -0.28
PDGFB-201ENST00000331163 C19orf84I3L1E1 186 aa13.32□□□□□ -0.28
PDGFB-201ENST00000331163 GPR37O15354 613 aa13.32□□□□□ -0.28
PDGFB-201ENST00000331163 NDUFB3O43676 98 aa13.32□□□□□ -0.28
PDGFB-201ENST00000331163 FOSL1P15407 271 aa13.32□□□□□ -0.28
PDGFB-201ENST00000331163 CCL3L1P16619 93 aa13.32□□□□□ -0.28
PDGFB-201ENST00000331163 SSBP1Q04837 148 aaKnown RBP13.32□□□□□ -0.28
PDGFB-201ENST00000331163 ACP7Q6ZNF0 438 aa13.32□□□□□ -0.28
PDGFB-201ENST00000331163 Q8IYB0 196 aa13.32□□□□□ -0.28
PDGFB-201ENST00000331163 GCSAMQ8N6F7 178 aa13.32□□□□□ -0.28
PDGFB-201ENST00000331163 ZDHHC22Q8N966 263 aa13.32□□□□□ -0.28
PDGFB-201ENST00000331163 MAPK1IP1LQ8NDC0 245 aa13.32□□□□□ -0.28
PDGFB-201ENST00000331163 IGHV1-69-2A0A0G2JMI3 117 aa13.32□□□□□ -0.28
PDGFB-201ENST00000331163 LDLRAD4O15165 306 aa13.32□□□□□ -0.28
PDGFB-201ENST00000331163 PPYP01298 95 aa13.32□□□□□ -0.28
PDGFB-201ENST00000331163 IFNA17P01571 189 aa13.32□□□□□ -0.28
PDGFB-201ENST00000331163 IL24Q13007 206 aa13.32□□□□□ -0.28
PDGFB-201ENST00000331163 ZNF343Q6P1L6 599 aa13.32□□□□□ -0.28
PDGFB-201ENST00000331163 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.32□□□□□ -0.28
PDGFB-201ENST00000331163 SLC2A8Q9NY64 477 aa13.32□□□□□ -0.28
PDGFB-201ENST00000331163 ZNRD1Q9P1U0 126 aa13.32□□□□□ -0.28
PDGFB-201ENST00000331163 NSG2Q9Y328 171 aa13.32□□□□□ -0.28
PDGFB-201ENST00000331163 RFNGQ9Y644 331 aa13.32□□□□□ -0.28
PDGFB-201ENST00000331163 CHD3Q12873 2000 aaKnown RBP13.31□□□□□ -0.28
PDGFB-201ENST00000331163 WNK1Q9H4A3 2382 aa13.31□□□□□ -0.28
PDGFB-201ENST00000331163 APELAP0DMC3 54 aa13.31□□□□□ -0.28
PDGFB-201ENST00000331163 FAM90A1Q86YD7 464 aa13.31□□□□□ -0.28
PDGFB-201ENST00000331163 OR13A1Q8NGR1 328 aa13.31□□□□□ -0.28
PDGFB-201ENST00000331163 BSCL2Q96G97 398 aaPredicted RBP13.31□□□□□ -0.28
PDGFB-201ENST00000331163 SIRT7Q9NRC8 400 aa13.31□□□□□ -0.28
PDGFB-201ENST00000331163 RAB1BQ9H0U4 201 aa13.31□□□□□ -0.28
PDGFB-201ENST00000331163 SLC25A10Q9UBX3 287 aaPredicted RBP13.31□□□□□ -0.28
PDGFB-201ENST00000331163 IGHV2-70P01814 119 aa13.3□□□□□ -0.28
PDGFB-201ENST00000331163 HBZP02008 142 aa13.3□□□□□ -0.28
PDGFB-201ENST00000331163 MDKP21741 143 aaPredicted RBP13.3□□□□□ -0.28
PDGFB-201ENST00000331163 GUSBP1Q15486 140 aa13.3□□□□□ -0.28
PDGFB-201ENST00000331163 TMEM182Q6ZP80 229 aaPredicted RBP13.3□□□□□ -0.28
PDGFB-201ENST00000331163 HOGA1Q86XE5 327 aa13.3□□□□□ -0.28
PDGFB-201ENST00000331163 LILRB2Q8N423 598 aa13.3□□□□□ -0.28
PDGFB-201ENST00000331163 TIMD4Q96H15 378 aa13.3□□□□□ -0.28
PDGFB-201ENST00000331163 TMPRSS5Q9H3S3 457 aa13.3□□□□□ -0.28
PDGFB-201ENST00000331163 TRGV10A0A0A0MS01 117 aa13.3□□□□□ -0.28
PDGFB-201ENST00000331163 PET100P0DJ07 73 aa13.3□□□□□ -0.28
PDGFB-201ENST00000331163 PGA5P0DJD9 388 aa13.3□□□□□ -0.28
PDGFB-201ENST00000331163 COL8A2P25067 703 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms