RNA–Protein interactions for RNA: ENST00000327628.9

TRAK1-201, Transcript of trafficking kinesin protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAK1, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-201ENST00000327628 UNQ9370/PRO34162Q6UXP9 181 aa11.49□□□□□ -0.57
TRAK1-201ENST00000327628 OR11H7Q8NGC8 314 aa11.49□□□□□ -0.57
TRAK1-201ENST00000327628 PPP1R3EQ9H7J1 279 aa11.49□□□□□ -0.57
TRAK1-201ENST00000327628 ELF5Q9UKW6 265 aaPredicted RBP11.49□□□□□ -0.57
TRAK1-201ENST00000327628 SOX21Q9Y651 276 aaPredicted RBP11.49□□□□□ -0.57
TRAK1-201ENST00000327628 NPIPB11E5RHQ5 1161 aa11.49□□□□□ -0.57
TRAK1-201ENST00000327628 IER3P46695 156 aa11.49□□□□□ -0.57
TRAK1-201ENST00000327628 PRNTQ86SH4 94 aa11.49□□□□□ -0.57
TRAK1-201ENST00000327628 ZNF738Q8NE65 137 aa11.49□□□□□ -0.57
TRAK1-201ENST00000327628 RSRP1Q9BUV0 290 aa11.49□□□□□ -0.57
TRAK1-201ENST00000327628 COX6A1P12074 109 aa11.48□□□□□ -0.57
TRAK1-201ENST00000327628 SRSF5Q13243 272 aaKnown RBP11.48□□□□□ -0.57
TRAK1-201ENST00000327628 IBA57Q5T440 356 aaKnown RBP11.48□□□□□ -0.57
TRAK1-201ENST00000327628 FHL5Q5TD97 284 aa11.48□□□□□ -0.57
TRAK1-201ENST00000327628 OR1N2Q8NGR9 330 aa11.48□□□□□ -0.57
TRAK1-201ENST00000327628 ITLN1Q8WWA0 313 aa11.48□□□□□ -0.57
TRAK1-201ENST00000327628 MSL2Q9HCI7 577 aa11.48□□□□□ -0.57
TRAK1-201ENST00000327628 FUT9Q9Y231 359 aa11.48□□□□□ -0.57
TRAK1-201ENST00000327628 KIF13BQ9NQT8 1826 aa11.48□□□□□ -0.57
TRAK1-201ENST00000327628 MNX1P50219 401 aaPredicted RBP11.48□□□□□ -0.57
TRAK1-201ENST00000327628 MEF2BQ02080 365 aaPredicted RBP11.48□□□□□ -0.57
TRAK1-201ENST00000327628 MRPL54Q6P161 138 aaKnown RBP11.48□□□□□ -0.57
TRAK1-201ENST00000327628 UNQ5815/PRO19632Q6UWF5 114 aa11.48□□□□□ -0.57
TRAK1-201ENST00000327628 CCL13Q99616 98 aa11.48□□□□□ -0.57
TRAK1-201ENST00000327628 MRPS18BQ9Y676 258 aaKnown RBP11.48□□□□□ -0.57
TRAK1-201ENST00000327628 HRKO00198 91 aa11.48□□□□□ -0.57
TRAK1-201ENST00000327628 SNRPD3P62318 126 aaKnown RBP11.48□□□□□ -0.57
TRAK1-201ENST00000327628 JOSD1Q15040 202 aaPredicted RBP11.48□□□□□ -0.57
TRAK1-201ENST00000327628 TAF15Q92804 592 aaKnown RBP eCLIP11.48□□□□□ -0.57
TRAK1-201ENST00000327628 SPSB4Q96A44 273 aa11.48□□□□□ -0.57
TRAK1-201ENST00000327628 DNAJC4Q9NNZ3 241 aa11.48□□□□□ -0.57
TRAK1-201ENST00000327628 TNFRSF19Q9NS68 423 aa11.48□□□□□ -0.57
TRAK1-201ENST00000327628 PGLYRP1O75594 196 aaPredicted RBP11.48□□□□□ -0.57
TRAK1-201ENST00000327628 CSN3P07498 182 aa11.48□□□□□ -0.57
TRAK1-201ENST00000327628 SP9P0CG40 484 aa11.48□□□□□ -0.57
TRAK1-201ENST00000327628 RBKSQ9H477 322 aa11.48□□□□□ -0.57
TRAK1-201ENST00000327628 FAM206AQ9NX38 181 aa11.48□□□□□ -0.57
TRAK1-201ENST00000327628 LOC105371242A0A075B767 164 aa11.47□□□□□ -0.57
TRAK1-201ENST00000327628 IGHV3OR15-7A0A075B7D8 119 aa11.47□□□□□ -0.57
TRAK1-201ENST00000327628 CXorf66Q5JRM2 361 aaPredicted RBP11.47□□□□□ -0.57
TRAK1-201ENST00000327628 TIMM23BQ5SRD1 257 aa11.47□□□□□ -0.57
TRAK1-201ENST00000327628 GATAD1Q8WUU5 269 aa11.47□□□□□ -0.57
TRAK1-201ENST00000327628 ZCCHC14Q8WYQ9 949 aaKnown RBP11.47□□□□□ -0.57
TRAK1-201ENST00000327628 OPN3Q9H1Y3 402 aaPredicted RBP11.47□□□□□ -0.57
TRAK1-201ENST00000327628 PPIAL4CA0A0B4J2A2 164 aa11.47□□□□□ -0.57
TRAK1-201ENST00000327628 PPIAL4GP0DN37 164 aa11.47□□□□□ -0.57
TRAK1-201ENST00000327628 RGPD3A6NKT7 1758 aaPredicted RBP11.47□□□□□ -0.57
TRAK1-201ENST00000327628 hCG_38984A0A1B0GV85 526 aa11.47□□□□□ -0.57
TRAK1-201ENST00000327628 KBTBD11O94819 623 aa11.47□□□□□ -0.57
TRAK1-201ENST00000327628 ADIPOQQ15848 244 aa11.47□□□□□ -0.57
TRAK1-201ENST00000327628 NSUN5P2Q63ZY6 315 aa11.47□□□□□ -0.57
TRAK1-201ENST00000327628 TMEM52Q8NDY8 209 aa11.47□□□□□ -0.57
TRAK1-201ENST00000327628 RALYQ9UKM9 306 aaKnown RBP11.47□□□□□ -0.57
TRAK1-201ENST00000327628 PRRC2BQ5JSZ5 2229 aaKnown RBP11.47□□□□□ -0.57
TRAK1-201ENST00000327628 TRAV9-1A0A075B6T8 112 aa11.47□□□□□ -0.57
TRAK1-201ENST00000327628 CEBPDP49716 269 aaPredicted RBP11.47□□□□□ -0.57
TRAK1-201ENST00000327628 MEF2CQ06413 473 aaPredicted RBP11.47□□□□□ -0.57
TRAK1-201ENST00000327628 OSR1Q8TAX0 266 aaPredicted RBP11.47□□□□□ -0.57
TRAK1-201ENST00000327628 CTHRC1Q96CG8 243 aa11.47□□□□□ -0.57
TRAK1-201ENST00000327628 Q96M66 194 aa11.47□□□□□ -0.57
TRAK1-201ENST00000327628 TP53RKQ96S44 253 aa11.47□□□□□ -0.57
TRAK1-201ENST00000327628 SMOC1Q9H4F8 434 aa11.47□□□□□ -0.57
TRAK1-201ENST00000327628 A0A087X0M5 115 aa11.46□□□□□ -0.57
TRAK1-201ENST00000327628 A0A0G2JLM5 398 aa11.46□□□□□ -0.57
TRAK1-201ENST00000327628 A0A1B0GX30 115 aa11.46□□□□□ -0.57
TRAK1-201ENST00000327628 HLA-DQB1P01920 261 aa11.46□□□□□ -0.57
TRAK1-201ENST00000327628 CD74P04233 296 aa11.46□□□□□ -0.57
TRAK1-201ENST00000327628 RND3P61587 244 aa11.46□□□□□ -0.57
TRAK1-201ENST00000327628 OR51G1Q8NGK1 321 aa11.46□□□□□ -0.57
TRAK1-201ENST00000327628 RHOVQ96L33 236 aa11.46□□□□□ -0.57
TRAK1-201ENST00000327628 DLL3Q9NYJ7 618 aa11.46□□□□□ -0.57
TRAK1-201ENST00000327628 K7ERU9 68 aa11.46□□□□□ -0.57
TRAK1-201ENST00000327628 VENTXO95231 258 aa11.46□□□□□ -0.57
TRAK1-201ENST00000327628 TCL1AP56279 114 aa11.46□□□□□ -0.57
TRAK1-201ENST00000327628 NUTF2P61970 127 aaKnown RBP11.46□□□□□ -0.57
TRAK1-201ENST00000327628 ZNF79Q15937 498 aa11.46□□□□□ -0.57
TRAK1-201ENST00000327628 COL5A1-AS1Q5SY13 56 aa11.46□□□□□ -0.57
TRAK1-201ENST00000327628 SELENOHQ8IZQ5 122 aaKnown RBP11.46□□□□□ -0.57
TRAK1-201ENST00000327628 SLC22A18ASQ8N1D0 253 aa11.46□□□□□ -0.57
TRAK1-201ENST00000327628 HIST1H2BAQ96A08 127 aa11.46□□□□□ -0.57
TRAK1-201ENST00000327628 NPDC1Q9NQX5 325 aaPredicted RBP11.46□□□□□ -0.57
TRAK1-201ENST00000327628 HERPUD1Q15011 391 aa11.46□□□□□ -0.57
TRAK1-201ENST00000327628 PCOLCEQ15113 449 aa11.46□□□□□ -0.57
TRAK1-201ENST00000327628 CSRP2Q16527 193 aa11.46□□□□□ -0.57
TRAK1-201ENST00000327628 OR4C12Q96R67 309 aa11.46□□□□□ -0.57
TRAK1-201ENST00000327628 ALKBH7Q9BT30 221 aaPredicted RBP11.46□□□□□ -0.57
TRAK1-201ENST00000327628 TMEM140Q9NV12 185 aa11.46□□□□□ -0.57
TRAK1-201ENST00000327628 DIRC3C9JPN6 131 aa11.46□□□□□ -0.58
TRAK1-201ENST00000327628 PF4V1P10720 104 aa11.46□□□□□ -0.58
TRAK1-201ENST00000327628 APOBEC3AP31941 199 aaPredicted RBP11.46□□□□□ -0.58
TRAK1-201ENST00000327628 SMUG1Q53HV7 270 aa11.46□□□□□ -0.58
TRAK1-201ENST00000327628 Q6AWC8 147 aa11.46□□□□□ -0.58
TRAK1-201ENST00000327628 Q6ZT83 130 aa11.46□□□□□ -0.58
TRAK1-201ENST00000327628 GPR82Q96P67 336 aa11.46□□□□□ -0.58
TRAK1-201ENST00000327628 DTX4Q9Y2E6 619 aa11.46□□□□□ -0.58
TRAK1-201ENST00000327628 NANOS3P60323 173 aaKnown RBP11.45□□□□□ -0.58
TRAK1-201ENST00000327628 LRRC75AQ8NAA5 344 aa11.45□□□□□ -0.58
TRAK1-201ENST00000327628 SMIM12Q96EX1 92 aa11.45□□□□□ -0.58
TRAK1-201ENST00000327628 HS3ST3B1Q9Y662 390 aa11.45□□□□□ -0.58
TRAK1-201ENST00000327628 A0A1W2PRD5 423 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms