RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 FGF21Q9NSA1 209 aa10.8□□□□□ -0.68
CCDC60-201ENST00000327554 MTCH1Q9NZJ7 389 aa10.8□□□□□ -0.68
CCDC60-201ENST00000327554 CRIM1Q9NZV1 1036 aa10.8□□□□□ -0.68
CCDC60-201ENST00000327554 OR1A1Q9P1Q5 309 aa10.8□□□□□ -0.68
CCDC60-201ENST00000327554 LAMA1P25391 3075 aa10.8□□□□□ -0.68
CCDC60-201ENST00000327554 IGHV1OR21-1A0A087WYE8 117 aa10.79□□□□□ -0.68
CCDC60-201ENST00000327554 TRBV6-6A0A0A6YYG2 114 aa10.79□□□□□ -0.68
CCDC60-201ENST00000327554 TRAV39A0A0B4J263 110 aa10.79□□□□□ -0.68
CCDC60-201ENST00000327554 MDFIC2A0A1B0GVS7 189 aa10.79□□□□□ -0.68
CCDC60-201ENST00000327554 NTF4P34130 210 aa10.79□□□□□ -0.68
CCDC60-201ENST00000327554 CDKN1BP46527 198 aa10.79□□□□□ -0.68
CCDC60-201ENST00000327554 PTTG1IPP53801 180 aa10.79□□□□□ -0.68
CCDC60-201ENST00000327554 KLF3P57682 345 aaPredicted RBP10.79□□□□□ -0.68
CCDC60-201ENST00000327554 SSPNQ14714 243 aa10.79□□□□□ -0.68
CCDC60-201ENST00000327554 TRIP6Q15654 476 aaKnown RBP10.79□□□□□ -0.68
CCDC60-201ENST00000327554 ATP6V1FQ16864 119 aa10.79□□□□□ -0.68
CCDC60-201ENST00000327554 C1orf174Q8IYL3 243 aa10.79□□□□□ -0.68
CCDC60-201ENST00000327554 RDH5Q92781 318 aa10.79□□□□□ -0.68
CCDC60-201ENST00000327554 SPSB4Q96A44 273 aa10.79□□□□□ -0.68
CCDC60-201ENST00000327554 SPACA9Q96E40 222 aaPredicted RBP10.79□□□□□ -0.68
CCDC60-201ENST00000327554 RNF2Q99496 336 aa10.79□□□□□ -0.68
CCDC60-201ENST00000327554 PPP1R3CQ9UQK1 317 aa10.79□□□□□ -0.68
CCDC60-201ENST00000327554 LRP5LA4QPB2 252 aa10.79□□□□□ -0.68
CCDC60-201ENST00000327554 K7EP13 123 aa10.79□□□□□ -0.68
CCDC60-201ENST00000327554 LINC01565O15544 149 aa10.79□□□□□ -0.68
CCDC60-201ENST00000327554 UBE2G2P60604 165 aa10.79□□□□□ -0.68
CCDC60-201ENST00000327554 Q0VG73 95 aa10.79□□□□□ -0.68
CCDC60-201ENST00000327554 SPATA45Q537H7 98 aa10.79□□□□□ -0.68
CCDC60-201ENST00000327554 WDR74Q6RFH5 385 aaPredicted RBP10.79□□□□□ -0.68
CCDC60-201ENST00000327554 SAXO1Q8IYX7 474 aa10.79□□□□□ -0.68
CCDC60-201ENST00000327554 C7orf61Q8IZ16 206 aa10.79□□□□□ -0.68
CCDC60-201ENST00000327554 SGCZQ96LD1 299 aa10.79□□□□□ -0.68
CCDC60-201ENST00000327554 SAMD10Q9BYL1 202 aa10.79□□□□□ -0.68
CCDC60-201ENST00000327554 OR2H1Q9GZK4 316 aa10.79□□□□□ -0.68
CCDC60-201ENST00000327554 ZNF703Q9H7S9 590 aaPredicted RBP10.79□□□□□ -0.68
CCDC60-201ENST00000327554 KCNIP2Q9NS61 270 aa10.79□□□□□ -0.68
CCDC60-201ENST00000327554 MMP17Q9ULZ9 603 aa10.79□□□□□ -0.68
CCDC60-201ENST00000327554 F6UZH7 168 aa10.78□□□□□ -0.68
CCDC60-201ENST00000327554 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.78□□□□□ -0.68
CCDC60-201ENST00000327554 ZFAND5O76080 213 aa10.78□□□□□ -0.68
CCDC60-201ENST00000327554 IGLV3-19P01714 112 aa10.78□□□□□ -0.68
CCDC60-201ENST00000327554 CA3P07451 260 aa10.78□□□□□ -0.68
CCDC60-201ENST00000327554 IGLC2P0DOY2 106 aa10.78□□□□□ -0.68
CCDC60-201ENST00000327554 IGLC3P0DOY3 106 aa10.78□□□□□ -0.68
CCDC60-201ENST00000327554 ZNF16P17020 682 aaPredicted RBP10.78□□□□□ -0.68
CCDC60-201ENST00000327554 KITLGP21583 273 aa10.78□□□□□ -0.68
CCDC60-201ENST00000327554 TIMP3P35625 211 aa10.78□□□□□ -0.68
CCDC60-201ENST00000327554 CDC34P49427 236 aaPredicted RBP10.78□□□□□ -0.68
CCDC60-201ENST00000327554 BAGE3Q86Y29 109 aa10.78□□□□□ -0.68
CCDC60-201ENST00000327554 BAGE2Q86Y30 109 aa10.78□□□□□ -0.68
CCDC60-201ENST00000327554 HSPB7Q9UBY9 170 aa10.78□□□□□ -0.68
CCDC60-201ENST00000327554 UQCR10Q9UDW1 63 aa10.78□□□□□ -0.68
CCDC60-201ENST00000327554 LAMTOR2Q9Y2Q5 125 aa10.78□□□□□ -0.68
CCDC60-201ENST00000327554 CHCHD2Q9Y6H1 151 aaPredicted RBP10.78□□□□□ -0.68
CCDC60-201ENST00000327554 GTF3C1Q12789 2109 aa10.78□□□□□ -0.68
CCDC60-201ENST00000327554 DIRC3C9JPN6 131 aa10.78□□□□□ -0.68
CCDC60-201ENST00000327554 HYPMO75409 117 aa10.78□□□□□ -0.68
CCDC60-201ENST00000327554 MMP23AO75900 390 aa10.78□□□□□ -0.68
CCDC60-201ENST00000327554 TOMM40O96008 361 aa10.78□□□□□ -0.68
CCDC60-201ENST00000327554 GPX1P07203 203 aa10.78□□□□□ -0.68
CCDC60-201ENST00000327554 KRTDAPP60985 99 aa10.78□□□□□ -0.68
CCDC60-201ENST00000327554 CPEB3Q8NE35 698 aaKnown RBP10.78□□□□□ -0.68
CCDC60-201ENST00000327554 PSMF1Q92530 271 aa10.78□□□□□ -0.68
CCDC60-201ENST00000327554 TNRC6AQ8NDV7 1962 aaKnown RBP10.78□□□□□ -0.68
CCDC60-201ENST00000327554 SH2D1BO14796 132 aa10.77□□□□□ -0.69
CCDC60-201ENST00000327554 SERPINA7P05543 415 aa10.77□□□□□ -0.69
CCDC60-201ENST00000327554 FRMD6-AS1P0C7T7 363 aa10.77□□□□□ -0.69
CCDC60-201ENST00000327554 CEACAM8P31997 349 aaPredicted RBP10.77□□□□□ -0.69
CCDC60-201ENST00000327554 GPM6AP51674 278 aa10.77□□□□□ -0.69
CCDC60-201ENST00000327554 FGFRL1Q8N441 504 aa10.77□□□□□ -0.69
CCDC60-201ENST00000327554 Q8N7P7 452 aa10.77□□□□□ -0.69
CCDC60-201ENST00000327554 OR10G8Q8NGN5 311 aa10.77□□□□□ -0.69
CCDC60-201ENST00000327554 IL1F10Q8WWZ1 152 aa10.77□□□□□ -0.69
CCDC60-201ENST00000327554 LRFN3Q9BTN0 628 aa10.77□□□□□ -0.69
CCDC60-201ENST00000327554 SRXN1Q9BYN0 137 aa10.77□□□□□ -0.69
CCDC60-201ENST00000327554 MTIF3Q9H2K0 278 aaKnown RBP10.77□□□□□ -0.69
CCDC60-201ENST00000327554 CHODLQ9H9P2 273 aa10.77□□□□□ -0.69
CCDC60-201ENST00000327554 LIN7CQ9NUP9 197 aaKnown RBP10.77□□□□□ -0.69
CCDC60-201ENST00000327554 CLN8Q9UBY8 286 aa10.77□□□□□ -0.69
CCDC60-201ENST00000327554 TRAV9-1A0A075B6T8 112 aa10.77□□□□□ -0.69
CCDC60-201ENST00000327554 A0A0J9YW62 118 aa10.77□□□□□ -0.69
CCDC60-201ENST00000327554 NPIPB11E5RHQ5 1161 aa10.77□□□□□ -0.69
CCDC60-201ENST00000327554 THBS3P49746 956 aa10.77□□□□□ -0.69
CCDC60-201ENST00000327554 ZNF90Q03938 601 aa10.77□□□□□ -0.69
CCDC60-201ENST00000327554 VWC2Q2TAL6 325 aa10.77□□□□□ -0.69
CCDC60-201ENST00000327554 KRTCAP3Q53RY4 240 aa10.77□□□□□ -0.69
CCDC60-201ENST00000327554 Q6ZVH6 145 aa10.77□□□□□ -0.69
CCDC60-201ENST00000327554 SIGLECL1Q8N7X8 197 aa10.77□□□□□ -0.69
CCDC60-201ENST00000327554 OR56B2PQ8NGI1 322 aa10.77□□□□□ -0.69
CCDC60-201ENST00000327554 ALKBH3Q96Q83 286 aaPredicted RBP10.77□□□□□ -0.69
CCDC60-201ENST00000327554 FAM103A1Q9BTL3 118 aaKnown RBP10.77□□□□□ -0.69
CCDC60-201ENST00000327554 LOC105371242A0A075B767 164 aa10.76□□□□□ -0.69
CCDC60-201ENST00000327554 TRAV24A0A0B4J272 114 aa10.76□□□□□ -0.69
CCDC60-201ENST00000327554 AQP7O14520 342 aa10.76□□□□□ -0.69
CCDC60-201ENST00000327554 DEGS1O15121 323 aa10.76□□□□□ -0.69
CCDC60-201ENST00000327554 RPS16P62249 146 aaKnown RBP10.76□□□□□ -0.69
CCDC60-201ENST00000327554 SUMO1P63165 101 aaKnown RBP10.76□□□□□ -0.69
CCDC60-201ENST00000327554 UBE2V1Q13404 147 aa10.76□□□□□ -0.69
CCDC60-201ENST00000327554 TMEM249Q2WGJ8 235 aa10.76□□□□□ -0.69
CCDC60-201ENST00000327554 RAET1LQ5VY80 246 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms