RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 GATA3P23771 443 aa8.34□□□□□ -1.07
VIPAS39-201ENST00000327028 IL3RAP26951 378 aa8.34□□□□□ -1.07
VIPAS39-201ENST00000327028 GZMKP49863 264 aa8.34□□□□□ -1.07
VIPAS39-201ENST00000327028 ZNF137PP52743 207 aa8.34□□□□□ -1.07
VIPAS39-201ENST00000327028 PRB3Q04118 309 aaPredicted RBP8.34□□□□□ -1.07
VIPAS39-201ENST00000327028 CBX3Q13185 183 aa8.34□□□□□ -1.07
VIPAS39-201ENST00000327028 TMEM249Q2WGJ8 235 aa8.34□□□□□ -1.07
VIPAS39-201ENST00000327028 HLA-DRB5Q30154 266 aa8.34□□□□□ -1.07
VIPAS39-201ENST00000327028 DCAF12L2Q5VW00 463 aa8.34□□□□□ -1.07
VIPAS39-201ENST00000327028 FAM71F2Q6NXP2 309 aa8.34□□□□□ -1.07
VIPAS39-201ENST00000327028 TMEM186Q96B77 213 aa8.34□□□□□ -1.07
VIPAS39-201ENST00000327028 GALNT14Q96FL9 552 aa8.34□□□□□ -1.07
VIPAS39-201ENST00000327028 ZNF251Q9BRH9 671 aa8.34□□□□□ -1.07
VIPAS39-201ENST00000327028 PCGF1Q9BSM1 259 aa8.34□□□□□ -1.07
VIPAS39-201ENST00000327028 AMMECR1Q9Y4X0 333 aaPredicted RBP8.34□□□□□ -1.07
VIPAS39-201ENST00000327028 C3orf85A0A1B0GTC6 90 aa8.34□□□□□ -1.07
VIPAS39-201ENST00000327028 ODF3BA8MYP8 253 aa8.34□□□□□ -1.07
VIPAS39-201ENST00000327028 B3GALNT1O75752 331 aa8.34□□□□□ -1.07
VIPAS39-201ENST00000327028 DUS4LO95620 317 aaKnown RBP8.34□□□□□ -1.07
VIPAS39-201ENST00000327028 ANXA3P12429 323 aa8.34□□□□□ -1.07
VIPAS39-201ENST00000327028 KLRD1Q13241 179 aa8.34□□□□□ -1.07
VIPAS39-201ENST00000327028 RPL39P5Q59GN2 51 aa8.34□□□□□ -1.07
VIPAS39-201ENST00000327028 ZNF66Q6ZN08 573 aa8.34□□□□□ -1.07
VIPAS39-201ENST00000327028 ZNF833PQ6ZTB9 187 aa8.34□□□□□ -1.07
VIPAS39-201ENST00000327028 CADM3Q8N126 398 aa8.34□□□□□ -1.07
VIPAS39-201ENST00000327028 MAPK1IP1LQ8NDC0 245 aa8.34□□□□□ -1.07
VIPAS39-201ENST00000327028 S1PR3Q99500 378 aa8.34□□□□□ -1.07
VIPAS39-201ENST00000327028 HSD17B10Q99714 261 aaKnown RBP8.34□□□□□ -1.07
VIPAS39-201ENST00000327028 LIN7CQ9NUP9 197 aaKnown RBP8.34□□□□□ -1.07
VIPAS39-201ENST00000327028 HIF1ANQ9NWT6 349 aa8.34□□□□□ -1.07
VIPAS39-201ENST00000327028 H0Y980 276 aa8.33□□□□□ -1.08
VIPAS39-201ENST00000327028 RNASEK-C17orf49H0YIS7 233 aa8.33□□□□□ -1.08
VIPAS39-201ENST00000327028 M0R1X1 148 aa8.33□□□□□ -1.08
VIPAS39-201ENST00000327028 F2RP25116 425 aa8.33□□□□□ -1.08
VIPAS39-201ENST00000327028 CATR1Q13166 79 aa8.33□□□□□ -1.08
VIPAS39-201ENST00000327028 SLC9A3R2Q15599 337 aa8.33□□□□□ -1.08
VIPAS39-201ENST00000327028 OR4P4Q8NGL7 312 aa8.33□□□□□ -1.08
VIPAS39-201ENST00000327028 CASTOR1Q8WTX7 329 aa8.33□□□□□ -1.08
VIPAS39-201ENST00000327028 MSI2Q96DH6 328 aaKnown RBP8.33□□□□□ -1.08
VIPAS39-201ENST00000327028 GPHA2Q96T91 129 aa8.33□□□□□ -1.08
VIPAS39-201ENST00000327028 KCNIP3Q9Y2W7 256 aa8.33□□□□□ -1.08
VIPAS39-201ENST00000327028 A0A0B4J2A0 478 aa8.33□□□□□ -1.08
VIPAS39-201ENST00000327028 PROP1O75360 226 aa8.33□□□□□ -1.08
VIPAS39-201ENST00000327028 OR5AC1P0C628 307 aa8.33□□□□□ -1.08
VIPAS39-201ENST00000327028 BCAP31P51572 246 aa8.33□□□□□ -1.08
VIPAS39-201ENST00000327028 C1orf229Q6ZS94 237 aaPredicted RBP8.33□□□□□ -1.08
VIPAS39-201ENST00000327028 OR51H1Q8NH63 302 aa8.33□□□□□ -1.08
VIPAS39-201ENST00000327028 MITD1Q8WV92 249 aa8.33□□□□□ -1.08
VIPAS39-201ENST00000327028 ST6GALNAC6Q969X2 333 aa8.33□□□□□ -1.08
VIPAS39-201ENST00000327028 TP53RKQ96S44 253 aa8.33□□□□□ -1.08
VIPAS39-201ENST00000327028 SHPKQ9UHJ6 478 aa8.33□□□□□ -1.08
VIPAS39-201ENST00000327028 VPS13CQ709C8 3753 aa8.33□□□□□ -1.08
VIPAS39-201ENST00000327028 BAHCC1Q9P281 2608 aa8.33□□□□□ -1.08
VIPAS39-201ENST00000327028 BUB1B-PAK6H3BSN5 160 aa8.33□□□□□ -1.08
VIPAS39-201ENST00000327028 J3QLI3 93 aa8.33□□□□□ -1.08
VIPAS39-201ENST00000327028 SSNA1O43805 119 aa8.33□□□□□ -1.08
VIPAS39-201ENST00000327028 ARG1P05089 322 aa8.33□□□□□ -1.08
VIPAS39-201ENST00000327028 DUTP33316 252 aaKnown RBP8.33□□□□□ -1.08
VIPAS39-201ENST00000327028 RPL30P62888 115 aaKnown RBP8.33□□□□□ -1.08
VIPAS39-201ENST00000327028 TMEM187Q14656 261 aa8.33□□□□□ -1.08
VIPAS39-201ENST00000327028 ANKRD55Q3KP44 614 aa8.33□□□□□ -1.08
VIPAS39-201ENST00000327028 C12orf45Q8N5I9 185 aaPredicted RBP8.33□□□□□ -1.08
VIPAS39-201ENST00000327028 ADTRPQ96IZ2 230 aa8.33□□□□□ -1.08
VIPAS39-201ENST00000327028 PHB2Q99623 299 aa8.33□□□□□ -1.08
VIPAS39-201ENST00000327028 AUP1Q9Y679 476 aa8.33□□□□□ -1.08
VIPAS39-201ENST00000327028 LINC00473A8K010 186 aa8.32□□□□□ -1.08
VIPAS39-201ENST00000327028 ATP6V1G1O75348 118 aa8.32□□□□□ -1.08
VIPAS39-201ENST00000327028 THBS3P49746 956 aa8.32□□□□□ -1.08
VIPAS39-201ENST00000327028 UBE2E1P51965 193 aa8.32□□□□□ -1.08
VIPAS39-201ENST00000327028 RRAS2P62070 204 aaPredicted RBP8.32□□□□□ -1.08
VIPAS39-201ENST00000327028 SRPXP78539 464 aa8.32□□□□□ -1.08
VIPAS39-201ENST00000327028 TCTEX1D1Q8N7M0 179 aa8.32□□□□□ -1.08
VIPAS39-201ENST00000327028 COQ8AQ8NI60 647 aa8.32□□□□□ -1.08
VIPAS39-201ENST00000327028 CHAC2Q8WUX2 184 aa8.32□□□□□ -1.08
VIPAS39-201ENST00000327028 TCTEX1D2Q8WW35 142 aa8.32□□□□□ -1.08
VIPAS39-201ENST00000327028 TMEM222Q9H0R3 208 aa8.32□□□□□ -1.08
VIPAS39-201ENST00000327028 MED28Q9H204 178 aa8.32□□□□□ -1.08
VIPAS39-201ENST00000327028 FLNAP21333 2647 aaKnown RBP8.32□□□□□ -1.08
VIPAS39-201ENST00000327028 CSMD1Q96PZ7 3565 aa8.32□□□□□ -1.08
VIPAS39-201ENST00000327028 TRAPPC2P0DI81 140 aa8.32□□□□□ -1.08
VIPAS39-201ENST00000327028 TRAPPC2BP0DI82 140 aa8.32□□□□□ -1.08
VIPAS39-201ENST00000327028 ZNF16P17020 682 aaPredicted RBP8.32□□□□□ -1.08
VIPAS39-201ENST00000327028 UCP1P25874 307 aa8.32□□□□□ -1.08
VIPAS39-201ENST00000327028 SP6Q3SY56 376 aa8.32□□□□□ -1.08
VIPAS39-201ENST00000327028 CYB5R2Q6BCY4 276 aa8.32□□□□□ -1.08
VIPAS39-201ENST00000327028 LIAT1Q6ZQX7 453 aa8.32□□□□□ -1.08
VIPAS39-201ENST00000327028 GLYATL2Q8WU03 294 aa8.32□□□□□ -1.08
VIPAS39-201ENST00000327028 LHX4Q969G2 390 aa8.32□□□□□ -1.08
VIPAS39-201ENST00000327028 MRPL20Q9BYC9 149 aaKnown RBP8.32□□□□□ -1.08
VIPAS39-201ENST00000327028 FAM212BQ9NTI7 297 aaPredicted RBP8.32□□□□□ -1.08
VIPAS39-201ENST00000327028 NOTCH2Q04721 2471 aa8.31□□□□□ -1.08
VIPAS39-201ENST00000327028 LY6LH3BQJ8 138 aa8.31□□□□□ -1.08
VIPAS39-201ENST00000327028 TXNL1O43396 289 aa8.31□□□□□ -1.08
VIPAS39-201ENST00000327028 TGFAP01135 160 aa8.31□□□□□ -1.08
VIPAS39-201ENST00000327028 HTR1DP28221 377 aa8.31□□□□□ -1.08
VIPAS39-201ENST00000327028 KIR2DS2P43631 304 aa8.31□□□□□ -1.08
VIPAS39-201ENST00000327028 MINOS1Q5TGZ0 78 aa8.31□□□□□ -1.08
VIPAS39-201ENST00000327028 DDB2Q92466 427 aa8.31□□□□□ -1.08
VIPAS39-201ENST00000327028 C7orf69Q9H7B7 122 aa8.31□□□□□ -1.08
VIPAS39-201ENST00000327028 PRR13Q9NZ81 148 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms